Petromyzon marinus (sea lamprey): 116948622
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Entry
116948622 CDS
T09614
Symbol
GAD1
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00250
Alanine, aspartate and glutamate metabolism
pmrn00410
beta-Alanine metabolism
pmrn00430
Taurine and hypotaurine metabolism
pmrn00650
Butanoate metabolism
pmrn01100
Metabolic pathways
Module
pmrn_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
116948622 (GAD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
116948622 (GAD1)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
116948622 (GAD1)
00430 Taurine and hypotaurine metabolism
116948622 (GAD1)
Enzymes [BR:
pmrn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
116948622 (GAD1)
BRITE hierarchy
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
116948622
NCBI-ProteinID:
XP_032821372
EnsemblRapid:
ENSPMAG00000018750
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All DBs
Position
34:complement(5160362..5221870)
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AA seq
616 aa
AA seq
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MATPPSTAESGGGAASSGAGRDPSARVLRPPTDYNDWCEVAHGCTRKLGMKLCGFLQRGV
LDERGSGGMPGSLGTQQSQQQAGGGRLGGADGTAGCKGDGAEMDGDPRVHRRTEVNFSNL
YARDLLPAKNGEEATVQFLLELMDILLSYIRKTFDRSTKILDFHHPHQLLEGIEGFNLEL
SDSPESLEQILVDCRDTLKYGVRTGHPRFFNQLSCGLDIIGLAGEWLTSTANTNMFTYEI
APVFVLMEKITLKKMREIIGWPNGDGDGVFSPGGAINNLYAVMAARYKFFPEVKMKGMAA
VPQLVLFTSECSHYSTKKAAAALGIGADNVFLIKADQRGKMIPADLEAKIIDSKKKGMVP
FFVSATAGTTVYGAFDPLHDVADICQRHNMWMHVDAAWGGGLLMSRKHRHKLNGVERANS
VTWNPHKMMGVLLQCSAILVREEGLLQGCNKMCAGYLFQPDKQYDTSYDTGDKVIQCGRH
VDIFKFWLMWKAKGTVGFEAQINKCLDLAQYLYRTIKNREGYELVFQGEPEHTNVCFWYI
PLSLRGMPDGEERRGKLSRVAPKVKARMMEAGTTMVGYQPQGDKVNFFRMVISNPAAMQS
DIDFMLSEIERLGHDL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccacgccgcccagcacagcggagagcggagggggggctgcctcgagcggagcgggg
agggatccctcggctcgtgtcctgcgacccccaaccgattacaacgactggtgcgaagtt
gcccacggctgcactcgcaagctgggtatgaagctgtgtgggttcctgcagagaggggtg
ttggacgagcgcggctctggcggcatgccgggctcgctcggaacccagcaaagccagcag
caggccggcgggggtcggctcggcggcgcggacggcaccgccggctgcaagggagacggc
gccgagatggacggcgaccccagggttcaccgccgcacggaggtcaacttctctaacctg
tacgcgcgagacctgctgccggccaagaacggcgaggaggcgacggtgcagttcctgctg
gagctgatggacatcctgctgagctacatccgcaagacgttcgaccgctccaccaagatc
ctggacttccaccacccgcaccagctgctggagggcatcgagggcttcaacctggagctg
tcggactcgcccgagtcgctcgagcagatcctggtggactgtcgggacacgctcaagtac
ggcgtgcgcacaggtcacccacggtttttcaaccaactgtcttgtggcctggacatcatt
ggattggctggggagtggctgacctcgacggccaacaccaacatgttcacctatgagatc
gcgcccgtgttcgtcctcatggagaaaatcacgctgaagaaaatgcgcgagatcatcggc
tggcccaacggcgatggcgacggcgtcttctctccagggggagccatcaataacctgtac
gccgtcatggccgctcgctacaagttcttcccggaggtgaagatgaaggggatggcggct
gtccctcagctcgtgctcttcacctccgagtgtagtcactactccaccaagaaggcagct
gctgcgcttgggatcggagccgacaatgtctttctcatcaaagccgaccagagggggaag
atgattcctgctgatctggaagccaagatcatcgactcaaagaaaaaagggatggtgccg
ttcttcgtgagtgccacggccggcaccacggtgtacggcgccttcgacccgctccatgac
gttgctgacatctgccagcgccacaacatgtggatgcacgtcgacgctgcgtggggaggt
ggactgctgatgtctcgcaagcatcgccacaagctcaacggggtcgagagggcgaactcg
gtgacctggaacccccacaagatgatgggggtgctgctgcaatgctcggctattctcgtc
cgtgaggagggcttgctgcagggctgcaacaagatgtgcgccgggtacctgttccagccc
gacaagcagtacgacacgtcctacgacacgggcgacaaggtgatccagtgcggccgccac
gtcgacatcttcaagttctggctcatgtggaaggccaagggcacggttgggttcgaggct
cagatcaacaaatgcctggacctggcccagtacctgtacaggaccatcaagaaccgagag
ggatatgaactcgtcttccagggggagccggagcacacgaacgtgtgtttctggtacata
cctctgagcctgcgagggatgcctgacggggaggagaggagaggcaagctcagcagggtc
gcgcccaaggtgaaggcgcgcatgatggaggcgggcaccaccatggtgggctaccagccg
cagggggacaaggtcaacttcttccgcatggtcatctccaacccggccgccatgcagtcc
gacatcgacttcatgctgtccgagatcgagcgtctgggccatgacctgtga
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