Petromyzon marinus (sea lamprey): 116948715
Help
Entry
116948715 CDS
T09614
Symbol
CIR1
Name
(RefSeq) corepressor interacting with RBPJ 1
KO
K06066
CBF1 interacting corepressor
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116948715 (CIR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cir_N
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
116948715
NCBI-ProteinID:
XP_032821597
UniProt:
A0AAJ7TS15
LinkDB
All DBs
Position
34:complement(10853045..10862859)
Genome browser
AA seq
578 aa
AA seq
DB search
MGKSFANFMCKKDFHPASKENIKRVWMAEQKVAFEKKKQDELLTQYTKEQEIYNNRLLMG
DERVKNGLNFMYEAPPGTYKEEEKETGGEKEYKFEWQKGAPREKYAKDDDNIRDQPFGIQ
VRNVRCIKCHKWGHVNTDRECPLYGLSGINATSATTDEPEPAMHPSDLMVEMRSSGFALK
QCVLGRKGDAADPSQQLIESEEDEDPEVEFLKSLTTKQKRKLLRKLDRLEKKTKKDKKRR
KNKQKKKSKGKKNKRRAESSSDDAESSDSQSDTKKKRCKHQKHKKSKLPSNDGSSTSSSS
SSSSSSSSSGSESDAEEESARKKRKGEAESRSAEPPQSTDGRRSNGAMEQLAGSSRHDQG
GASGSRWPGFREPGVGGRKWGEGAGSHRRIEDGRRHGEGGGEEKEGRHVGEGRDRGYRRD
GKSRGEDRGGRVRGEDRDDNKGEDRQGRDRGEERDNNKGEDRESKYRGEDRWGRSRGEER
EDKQHRGEDREGRDRGEQRERKHRGEEREGRDRGEHRENKNRGEEREDKHRGEYKQGRDG
REQRERKHRGEEKEGRDKGEQRENNHKGQVGERKRSRE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcgttcgctaacttcatgtgtaaaaaggatttccatcctgcgtcgaaggaa
aacatcaaacgggtatggatggcagagcaaaaggtcgcgttcgagaagaagaaacaagac
gagctgcttacgcaatacaccaaagagcaggagatttataataaccggttactcatggga
gatgaacgtgtgaagaatggactaaacttcatgtatgaggcaccaccaggcacctacaaa
gaagaggaaaaggagacgggaggagaaaaggagtacaagtttgagtggcagaagggggct
ccgagagaaaagtacgcaaaggacgatgacaatattcgcgaccagcctttcggaattcag
gtgcggaacgttcgctgcatcaagtgccacaagtggggccacgtgaatacggaccgcgag
tgccctctctacggcctctccggcatcaatgccacatccgccactactgatgagccagag
ccggccatgcacccatctgacctcatggtggagatgaggagcagcggatttgcgctcaag
cagtgtgtgctgggcaggaagggtgatgctgcagacccctcacagcaattgatcgaaagt
gaggaggatgaagacccagaagtggagtttttgaagtcactgacgacgaagcagaaacgc
aagctgctcaggaaactcgaccgccttgaaaagaaaacaaaaaaggataagaagaggagg
aaaaacaagcagaagaagaagagcaaggggaagaagaataaacgcagagcagagtcgagc
tccgacgacgccgagagctcagactcccagtccgacaccaaaaagaagaggtgcaagcat
cagaaacataagaaaagcaagttaccatccaacgacggcagcagcacctcgtcatcgtcg
tcgtcgtcgtcgtcatcttcaagctccgggtcggagagtgacgcggaagaggagagcgct
cgcaagaagcggaagggagaagcggagtcacgaagcgcggaaccaccgcaaagcacggac
ggcaggcggagcaacggtgcgatggagcaacttgctgggtcgtcgcggcacgaccaggga
ggcgcgagcggcagtcgctggccggggttccgggagcctggggtgggtggcagaaaatgg
ggcgaaggagcgggaagccatcgtaggattgaagatgggcgcaggcacggagaaggtggc
ggtgaggagaaagaggggagacacgtgggcgaggggagagacagaggataccggagggat
ggtaaaagcaggggtgaggatagaggggggagagtcaggggtgaggatagagacgataac
aaaggtgaggatagacaggggagagacaggggtgaggagagagacaataacaaaggtgag
gatagagagagtaaatacaggggtgaggatagatgggggagaagcaggggtgaggagaga
gaggataaacaacacaggggtgaggatagagaggggagagacaggggagagcagagagag
cggaaacacaggggtgaggagagagaggggagagataggggtgagcatagagagaataaa
aacagaggtgaggagagagaggataaacacaggggtgagtataaacaggggagagacggg
agagagcagagagagcggaaacacaggggtgaggagaaagaggggagagacaagggagag
cagagagagaataaccacaaaggtcaggttggagagcggaagagaagcagggaatga
DBGET
integrated database retrieval system
