Petromyzon marinus (sea lamprey): 116948723
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Entry
116948723 CDS
T09614
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116948723
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116948723
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
116948723
NCBI-ProteinID:
XP_032821609
UniProt:
A0AAJ7TQA4
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Position
34:11005298..11055752
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AA seq
406 aa
AA seq
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MFSPSSPLGCLNAAPYLTVYPCLPYQPPSNPRKPCPSSIPRRYIPGRMEGKITESGLNVT
LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGQTDAIFKAFS
MITNKFEEDINASMANSAVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV
AGDMLPNSTERAVTVSGAPEAIIQCVKQICVIMLESPPKGATIPYRPKPPAAPVIFAGGQ
AYALQGQYAVPHPEQVWMPLPRQVLMNSAFPMIQGHSKINELREPVPAHVKFPPPSSAAQ
APPIPAPPPPPLPHDPQDPTLLIPTASAPCHSHALMIQSDHAHAHHHHHHQQYQQQQHQH
HQQHHQQHHQHQQQQHASSPTTGLAHYLSSIRWAAPTPPRRTLYVL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcccttccagtcctctaggctgcctcaacgcagcgccctatctcacagtgtac
ccgtgcctgccgtaccaaccccctagcaatccccgaaaaccctgtccctccagcatcccc
cgccgctacatcccgggcaggatggagggaaagatcaccgagtcgggactcaacgtgacg
ctcaccatccgtctgctcatgcacggcaaggaggtgggaagcataattggaaagaaaggg
gagacggtgaagaagatgcgagaagagagcggcgcacggataaacatctcggagggctcg
tgccccgaacggatcgtcaccatcaccggacagacggatgccatcttcaaagccttctcc
atgatcaccaacaagtttgaggaggacatcaacgcctcgatggcgaacagcgcggtgaca
agcaagccccccgtgacgctccgcctcgtggtgccggccagccagtgtggctccctcatt
gggaagggcggctccaagatcaaggagatccgagagtcgacaggagcgcaggtgcaggtg
gcgggcgacatgcttcccaactcgacggagagggcggtgaccgtgtcaggcgcccctgag
gccatcatccagtgcgtcaagcagatctgcgtcatcatgttggagtcccctccaaaggga
gccaccatcccctaccgacccaagcctcctgctgcacccgtgatctttgccggagggcag
gcttacgctctgcaggggcagtacgccgtccctcacccggagcaagtgtggatgccactg
ccgagacaagtgctcatgaactccgcttttcccatgatacagggccacagcaagattaat
gagctgcgagagcccgtgcccgctcacgtgaaattcccaccgccctcgtcagcagcccag
gcaccgccgataccggcgccgccgccgccgccgctgccacacgacccacaggatcccacg
ctgctcattcccaccgcctcggccccctgtcatagccatgcgctgatgatccagagcgac
cacgcgcacgcacatcatcatcaccaccaccagcagtaccagcagcagcagcaccagcac
caccagcagcaccaccagcagcaccaccagcaccagcagcagcagcatgcgtccagcccc
accacaggactggcgcattatctctccagcatcaggtgggcggctcccaccccgccccgg
cgtaccctctacgtcctgtga
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