Petromyzon marinus (sea lamprey): 116948794
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Entry
116948794 CDS
T09614
Name
(RefSeq) polypyrimidine tract-binding protein 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116948794
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116948794
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
116948794
NCBI-ProteinID:
XP_032821783
UniProt:
A0AAJ7X6F1
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All DBs
Position
35:670079..705781
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AA seq
568 aa
AA seq
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MDMDGNIRTDMGSPAGSKRGPDTFYSASAPKNGSTAEGSESKKFKGDSSDELPSKVLHIR
KLPENATEAEVVTLALPFGRVTNILMLKGKSQAFLEMASEEAAVAAVTFYSTDPPVLRNQ
PVYVQYSTYKSLKTDNSAYQAKAQAAMMVANGSDSEETNSAAPQSPILHIIVENLLYPIT
LEVLHHVFSKYGTVLKIIIFNKNSQYQALMQFADASNAHQAKTMLDGQNIYNGCCTLRVG
FSRLTNLNVKYNNEKSRDLTRPDLPAGEGQGPFPLMRAQGKETSLLGNPALIHGGFPNMP
QSADLNPRHSQNYFPHSPGLPSGVGGRLPGGLPGGMGSFGFPGMMGPRLGLPPPTPSRGG
GGGGSGGMPGLPVNSPVLLTSNLNAEAVTPQRLFNLFGMFGDVLRVKILYNRKDTALIQM
ADSNQAQIVMNHLNGQRMYGKPIRVTSSRYQTVQLPRDGSDSLTCDFSDSPLHRFRRMGA
KNFHHIFPPSVTLHLSNIPSSVLEDDLKTLFESNGCVVKALKFFATDHKMALVQMESLEE
AIQTLAELHNHELEKNRLLRVSFSKSVI
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacggcaatattcgaacagatatgggatcacctgctggttcaaagagggga
ccggacactttctactctgctagtgctcctaagaatggctccactgccgagggaagcgag
agcaagaagttcaaaggggactcgagcgacgagctgccctccaaggtgctgcacatccgc
aagctgccggagaacgccacggaggccgaggtggtgacgctggcgctccctttcggccga
gtcaccaacatcctcatgctgaagggcaagagccaggcgttcctggagatggcctcggag
gaggcggccgtggcggccgtgacgttctacagcacggacccgcccgtgctgcgcaaccag
cccgtctacgtgcagtactccacctacaagtccctcaagaccgacaactccgcataccag
gcgaaggcccaggcggccatgatggtggcgaacggctcggacagcgaggagaccaactcg
gccgccccccagagcccgatcctgcacatcatcgtggagaacctgctctaccccatcacc
ctggaggtcctccaccatgtgttttctaagtacggcacagtcctgaaaataataattttc
aacaaaaacagccagtatcaagccctgatgcagtttgcggatgccagtaacgcacatcaa
gccaaaacgatgctcgacgggcaaaacatttacaatggctgctgcacgctgcgtgtgggc
ttctcgcgcctcaccaacctcaacgtcaagtacaacaacgagaagagccgcgacctcact
cggcccgacctgccggccggcgagggccagggcccgttccccctgatgcgcgcacagggc
aaggagacctccctgctcggtaacccagccctcattcacggaggcttccccaacatgccg
cagtctgcagatctaaacccgaggcattctcaaaactacttcccccattctccgggcttg
ccgagcggcgttggcgggaggctgcccggtggcctccctggtggcatgggctccttcggc
ttcccgggcatgatggggccgcgcctgggtctgcccccgcccacgccatccagaggcggc
ggcggcggcggtagcggcgggatgccgggcctccccgtcaactccccagtgctgctgacg
agcaacctcaatgccgaggcggttacgcctcaaaggctctttaatctgttcggcatgttt
ggcgacgtgctgcgcgtgaagatcctctacaacaggaaggacacggcgctcatccagatg
gccgactccaaccaagcgcagatcgtcatgaaccacctgaacgggcagcggatgtacggc
aagccgatacgcgtgacgagctcgcgctaccagacggtgcagctgccgcgcgacggctcg
gactccctgacgtgcgacttctccgactcgccgctgcaccgcttccgccgcatgggcgcc
aagaacttccaccacatcttcccaccctccgtcacgctgcacctctccaacatcccatcc
tcggtgttggaggatgatctgaagaccctttttgaaagcaatggctgcgtagtgaaggcg
ctcaagttctttgccaccgaccacaagatggccctcgtccagatggaatcgctggaggag
gccatccagacgctggccgagttgcacaaccacgagttggagaagaaccgcctgctgcgc
gtctccttctccaagtcggtcatctga
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