Petromyzon marinus (sea lamprey): 116948892
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Entry
116948892 CDS
T09614
Symbol
PPWD1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116948892 (PPWD1)
03110 Chaperones and folding catalysts [BR:
pmrn03110
]
116948892 (PPWD1)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
116948892 (PPWD1)
Spliceosome [BR:
pmrn03041
]
Complex C
Other components
PPlases
116948892 (PPWD1)
Chaperones and folding catalysts [BR:
pmrn03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
116948892 (PPWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
Beta-prop_WDR19_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
116948892
NCBI-ProteinID:
XP_032822009
UniProt:
A0AAJ7TQ62
LinkDB
All DBs
Position
35:5402713..5423931
Genome browser
AA seq
658 aa
AA seq
DB search
MASDSSEAKRIRDEEEDEEEEEKENEENKNKKAKEDVVEEKNEGKDVKDDGGEKEEEDDA
WVGPLPCEAVAVSKKKVLEFERVFLDNLPCAAMYERSYMHRDTITHVAVSKTDFLITASQ
DGHVKFWKKNEGVGIEFAKHFRSHLGAIEDISVSSEGALFCSVGDDQAMKVFDVVNFDMI
NMLKLGYQPGCSEWIYSPGEPVCVVACSEKLTGRVHIYDGRGSSTPLRTLEKLHSSPVCL
LCFNPIYKVVVSADKTGMIEYWTGPQLDYAFPRNVAWQYKTDTDLYEFARCRTCPTALTF
SPDGSRIATIALDRKVRIFQFRTGKLIRVFDESLKMFTELQQMKQQLPDMEFGRRMASER
ELDKVEAARFANIVFDETGHFVLYGTMLGIKVINIETNRCVRILGKQENSRPLHVALFQG
VARTKHAALTVEMRASDNPVLMSVQSDPTVFASAFKKNRFYMFTRREPEDAKSPESDRDV
LNEKPSKEEVMAATQSEGAKRVSDCAIMHTTYGDVTLRLYPSECPKAVENFCVHSKSGYY
NGHIFHRVIKGFMVQTGDPTGTGMGGESIWGTEFEDEFHHTLRHDRPYTLSLANAGPATN
GSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQKISNVKTNPKTDKPYEDVTIISISIR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggatagttcggaggccaagcggatacgggacgaggaggaggatgaggaggaa
gaggagaaagagaacgaggagaacaagaataagaaggcaaaggaggacgtcgtagaggag
aaaaatgagggaaaagatgtgaaggacgatggtggtgagaaggaggaggaggatgatgcc
tgggtcgggcccttgccatgcgaggctgttgccgtcagtaagaagaaagtgctggaattc
gagcgggtgtttctcgacaacctaccgtgtgccgccatgtacgagcgcagctacatgcac
cgcgacaccatcacgcacgtggccgtcagcaagacggatttcctcatcacagccagccag
gatggacacgtgaagttctggaaaaaaaacgaaggcgtcggaatagagtttgctaagcac
ttccgcagtcacttgggtgcgatcgaggacatctctgtgagctcagagggggcactgttc
tgctcagtgggtgatgatcaggccatgaaggtgtttgacgtcgtaaacttcgacatgatc
aacatgctgaagcttggctaccaacctggctgctccgagtggatctactctccgggggag
ccggtgtgcgtggtggcgtgcagtgagaagctcacagggcgcgtgcacatctacgacggg
cggggctccagcactcccctgaggacccttgagaagctgcattcctcgcccgtgtgcctg
ctgtgctttaaccccatctacaaggtggttgtgtcggccgacaagacgggcatgatcgag
tactggacggggccgcagctggactacgccttcccacgcaacgtggcgtggcagtacaag
acggacacggacctctacgagtttgcgcgttgccgcacgtgcccaacggcgctgactttc
tctcccgacggctcccgcatcgccaccattgcgctggaccgcaaagtgcgcatcttccaa
ttccgtacgggcaaactcatccgggtcttcgacgagtcgctcaagatgttcacagagctc
cagcagatgaagcagcagctgccagacatggaatttgggcggcgcatggccagcgagcgt
gagctggacaaagtggaagccgctcgatttgccaacatcgtgtttgacgagacggggcac
tttgtactctatggtaccatgctcggaatcaaggtcatcaacattgagacaaatcggtgc
gtgcggatcctgggcaagcaggagaactcgcggccgctgcacgtggcgctgttccagggc
gtggcgcgcaccaagcacgccgccctgacggtggagatgagggcctccgacaaccccgtg
ctgatgagcgtgcagagcgacccaacggtcttcgcgtctgccttcaagaagaaccgcttc
tacatgttcacgcggcgtgagcccgaggacgccaagagccccgagtcggaccgcgacgtc
ctcaacgagaagccgagcaaggaggaggtgatggcggcaacgcagtcggagggggccaag
cgcgtgtcggactgcgccatcatgcacaccacctacggcgacgtcacgctgcgcctctac
ccctccgagtgccccaaggctgtggagaatttctgcgtgcacagcaagagcggctactac
aacgggcacattttccatcgcgttatcaagggcttcatggtgcagacgggcgacccgacg
ggcaccggcatgggcggagagagcatctggggcaccgagtttgaggacgagttccaccac
accctgcggcatgaccgcccctacaccctgagcctggccaacgccgggccggccaccaac
ggctcgcagttcttcatcaccgtcgtgcccacgccgtggttggacaacaagcacacggtg
tttgggagggtcaccaagggcatggaggtcgtgcagaagatctccaacgtcaagaccaac
cccaagacggacaagccgtacgaggacgtcaccatcatcagcatctccatccgatag
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