Petromyzon marinus (sea lamprey): 116948975
Help
Entry
116948975 CDS
T09614
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116948975
Membrane trafficking [BR:
pmrn04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116948975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
TMEM154
DUF4381
Podoplanin
Motif
Other DBs
NCBI-GeneID:
116948975
NCBI-ProteinID:
XP_032822198
UniProt:
A0AAJ7TT27
LinkDB
All DBs
Position
35:12255292..12283457
Genome browser
AA seq
930 aa
AA seq
DB search
MAQRTPPHLAQRRSRLLLLCLLALLASLGSGELARCDPARFQCRNGRCVPEAWRCDGGND
CGDGSDEMGCGPCRKDQFSCADGMCINRRWRCDGRPDCPDSSDESPAECGLRSCASDEFD
CGRNATSRRCIQHSWVCDGDRDCESGEDEQGCAPVVCAEHEVTCRSGKCVDEKFACDGDD
DCGDGTDEEGCPTVPPCAASSLACPSDPAVCVPPMLQCDGHADCPGGEDEADERCPGEGR
LDPSCRSNAFRCRSGHCVHEGWRCDGDPDCDDGSDEEGCKVEACGASELRCTDGSCVPGS
SQCDGFRDCHDGSDEHDCNNTAVDCTGPGWFRCRSGECLQDRQVCDGKRDCHDWSDEPLS
LCNVNECATTNGGCSHTCWDRPLGYECGCPAGYELLDEYTCGDTDECKQPGVCSQLCINY
KGGYKCDCYEGYTMDPATQACKATEHQKTYLIFANQRDVRRVDLHTRSYKQLISRTRNTV
AVAVEITANRIYWSDLGQKQVYSAHMDEAHDSTRHTSVLGEAPVFVEGIAIDWVHGNLYW
TDSKAKTVAVAKPDGSRRRTLFGQGLSEPRAIAVDPLSGFVYWSDWGQPAKIEKAGMNGV
SRQVIVSKDIEWPNGITLDLVNKRLYWVDSKLRTLSSVNLAGGERHEVMHQTDALHHPFA
IAIFEDKVYWADGEKEAIYSADKHTGSGISSVVEDLHSPQDLLVYHPLLQPNGTDWCSAA
PLPNGGCAYLCLPAPHITAGSPRFTCACPDGEFLANDGRSCSKDHPPVVVMTTGPKDVTS
REPQRTSPRPATASSSTTTTTLSDRPAAVTTDDAARQGQRTSTAPATSPTATNSHMLARK
EEASTSVVPVALGITIPIVLLLLLAAGAVMLWRSWKRRSAKSIHFENPVYRKTTEEQEEE
REMSFGMTRNGSVSSAHSYTPIVQVHVEED
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcggacccccccgcacctcgcgcagcgtcgcagccgcctcctcttgctctgc
ctcctcgcgctgctcgcctccctcggctcgggcgagctggctcgctgcgacccggctcgc
ttccagtgccgcaatgggcgctgcgtgcccgaggcgtggcgctgcgacggcggcaacgac
tgcggtgacggcagcgacgaaatgggatgcggaccttgcaggaaggatcagttcagctgc
gccgatgggatgtgcatcaaccgcaggtggcggtgcgacgggcggcccgactgccccgac
agctcggatgagagcccggccgagtgcggcttacgctcttgcgcatctgatgagtttgac
tgcggtagaaatgcgacgtctcggcgctgcatccagcacagctgggtgtgcgacggagac
cgcgactgcgagagcggggaggacgagcagggctgtgcccccgtggtgtgtgcagagcac
gaggtcacgtgccgcagcggcaagtgcgtggatgagaagttcgcgtgcgacggcgatgac
gactgcggcgacggcacggacgaggagggctgccccacggtgccgccgtgcgccgccagc
tcgctggcgtgcccgtccgacccggccgtgtgcgtgccgccgatgctgcagtgcgacggg
cacgccgactgccccggcggcgaggatgaggcggacgaacgctgccccggtgagggccgc
ctggaccccagctgcaggagcaatgcgtttcgctgccgctcgggccactgcgtgcacgag
ggttggcgctgcgacggggaccccgactgcgatgacggatctgacgaggagggatgcaag
gtggaggcttgcggcgcgagcgagctgcgctgcacggacgggtcgtgcgtgcccggtagc
agccagtgcgacggcttcagggactgccacgatggctccgacgaacacgactgcaacaac
acggccgtggactgcacgggccccggctggttccgctgccgctccggcgagtgcctgcag
gaccgtcaagtgtgcgacgggaagagagactgccacgactggtcggacgagccgctcagc
ctgtgcaatgtgaacgagtgcgctaccaccaacggaggctgctcacacacatgctgggac
cggccactgggctacgagtgtggctgccccgcaggatacgaactcctggacgagtacaca
tgcggagacacggacgagtgcaagcagcccggcgtttgcagccagctgtgcatcaactac
aagggcggatacaagtgcgactgctacgagggatacaccatggaccctgccacgcaggcc
tgcaaggccactgagcaccaaaagacctacctgatcttcgcaaaccagcgtgacgtacgc
cgcgtagacctgcacacgcgcagctacaagcagctcatctcgcgcacgcgcaacactgtc
gccgtagccgtcgagatcacggccaaccgtatctactggtccgacctgggccagaagcaa
gtttacagcgcacacatggatgaggcgcacgattccacgcgccacaccagcgtgctgggc
gaggcgcctgtctttgttgagggcatcgccatcgactgggtgcacgggaatctctactgg
accgactcgaaagccaaaaccgttgccgtggccaaacccgacggctcccggcgccgcacg
ctcttcggtcaagggttgagcgagccccgtgccatcgccgtggacccactgagcgggttc
gtctactggtccgactggggtcagccggccaagatcgagaaggccggcatgaacggcgta
agccgccaggtcatcgtgtcgaaggacattgagtggcccaacggcatcacgcttgacctg
gtgaacaagcgtctgtactgggtggactcaaagctgcgcacactctctagcgtgaacctg
gccgggggcgagaggcacgaggtgatgcaccagaccgacgcgctccaccaccccttcgcc
atcgccatcttcgaggacaaggtatattgggctgacggggagaaggaagccatctacagc
gctgacaagcacacggggagcggcatttcctccgtggtagaggacctgcacagcccccag
gacttgctcgtataccaccccctgctgcagccaaacggcacggactggtgcagcgcagcg
ccgctcccgaacggcggctgcgcatacctgtgcctgccggcgccgcacatcaccgccggg
tcgccgcgattcacgtgcgcgtgccccgatggggagttcctcgcaaacgacggccgcagt
tgcagcaaagaccacccccctgtcgtcgtgatgacaaccggaccgaaggacgtcacgagt
cgggagccccagcggacgagtccacggcccgcgaccgcctcgtcctccaccacgaccacc
acgctctccgaccgcccggctgccgtgacgacggatgacgcggctcggcagggccagcgg
acaagcacggcgcctgcgacctcccccaccgcgaccaactcccatatgctggctcggaag
gaggaggcctcaacgtctgtggtgcctgtggcactggggattaccattcctattgtgctg
ctgctgctgttggcggcaggtgcagtgatgctgtggcgtagctggaagcggcgtagtgcc
aaaagcattcactttgagaacccggtttaccgcaaaaccacggaggagcaggaagaggag
cgagagatgagctttggcatgactcgcaacggctccgtgagcagcgcccactcctacacg
ccgattgtgcaggtccacgtagaagaggactaa
DBGET
integrated database retrieval system
