Petromyzon marinus (sea lamprey): 116949271
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Entry
116949271 CDS
T09614
Name
(RefSeq) peroxisome proliferator-activated receptor alpha-like
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03320
PPAR signaling pathway
pmrn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116949271
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
116949271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116949271
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmrn03310
]
116949271
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116949271
Nuclear receptors [BR:
pmrn03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
116949271
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Ortholog
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Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116949271
NCBI-ProteinID:
XP_032822274
LinkDB
All DBs
Position
36:1154471..1186837
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AA seq
567 aa
AA seq
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MNWADMCTVVGDGAELSGLDGLFGWPDLNMDPVSPTCSLGDSVCTESDSAPFSTPADSPS
KPWPGPDFGSVEGQDAGYGAYAGYADLGVAPPPQATPRTAPEVPVLALGVAALPIECRVC
GDRASGFHYGVHACEGCKGFFRRTIRMKLEYEQCEQRCKIQKKSRNKCQHCRFQKCLVVG
MSHEAIRFGRMPQAEKERLIAEVCANGLTEAAAAAGDLRSLARVIQEAYLRIFPLSKARA
QAILAGKAAGSAVVIHDHDSLARAEDTILRKLGYGTIHESSGAIGVSLASVAAATGCGGC
GGACGGAGGAAGDDGAVCDAAARGRVLGNDRIFITVVSGGGGVGIGGVRRGGCGADAQAD
LLRKGTPEIRMFNRCHYRVVESVREVTEFAKSIPGFMALDLNDQVTLLKYGVYEVIFAML
AAQINKDGLLMAYGTAFITREFLRSLRTPFCHVLEPKFVFSVRFNALALDDTDLALYVAA
IILCGDRPGLLDVGPVERMQERVLQALDLQLRRSHPESSFLFPKLLQKLSDLRQLVAEHA
QMVHDIRRTEADTAMPPLLQEIFKDMY
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggccgacatgtgtacggtggttggggatggagccgagttgtcaggtctggac
ggcctgttcgggtggccggacctgaacatggaccccgtgagtcccacctgcagcctgggc
gactccgtgtgcacagagtccgactctgcgcccttctccacccctgccgactcgccatcc
aagccctggccgggaccggacttcggcagcgtcgagggccaggacgccggctacggcgcc
tacgccggctacgctgatctcggcgtagcgccgccgccgcaagcgacgccgcgcacggcc
cccgaggtgccggtgctggcgctgggggtggcagcgctgcccatcgagtgccgcgtgtgc
ggggaccgcgcctccggcttccactacggggtccacgcctgcgaggggtgcaagggattc
ttccgccgcacgatccgcatgaagctggagtacgagcagtgcgagcagcgctgcaagatc
cagaagaagagtcgtaacaagtgccagcactgccgcttccagaagtgcctcgtcgtcggc
atgtcgcacgaggcgatccgcttcgggaggatgccccaggcggagaaggagcggctcatc
gccgaggtgtgcgccaacgggctcacggaggcggccgctgcggcgggagacctgcgctcg
ctggcgcgcgtcatccaggaggcctacctccgcatcttcccgctgtccaaggcccgggcg
caggccatcctggccggcaaggcggccggcagtgcggtggtgatccacgaccacgactcg
ctcgcccgggcagaggacactatcctgcgcaagctgggctacggcaccatccacgagagc
agcggcgccattggcgtcagcctcgccagcgtcgccgccgccaccggctgcggcggctgc
ggcggagcctgcggcggcgccggtggcgccgcgggggacgacggcgcggtgtgcgacgcg
gcggcgcgcggccgcgtgctcggcaacgaccgcatcttcatcaccgtggtgagcggcggc
ggcggcgtcggcatcggcggagtccgcagaggaggctgcggcgccgacgctcaggccgac
ctgctgcggaagggcacgccagagatccgcatgttcaaccgctgccactaccgcgtggtg
gagtccgtgcgggaggtcaccgagttcgccaaaagcatcccgggcttcatggccctcgac
ctcaacgaccaggtcacgctgctcaagtacggtgtgtacgaggtgatcttcgcgatgctg
gctgcccagatcaacaaggacgggctgctcatggcgtacggcacggcgttcatcacgcgc
gaattcctgcgctcgctgcgcacgcccttctgccacgtcctcgagcccaagtttgtcttc
tcggtgcggttcaacgccctggcgctggacgacactgacctggctctctacgtcgccgcc
atcatcctgtgcggcgaccgaccgggcctcctggacgtgggccccgtggagcggatgcag
gagcgcgtgctgcaggcgctcgacctgcagctgaggcgcagccaccccgagagctccttc
ctcttccccaagctgctgcagaagctctccgacctgcgccagctggtggccgagcacgcc
cagatggtgcacgacattcggcgcacggaggccgacacggccatgccgcccctgctgcag
gagatcttcaaggacatgtactga
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