Petromyzon marinus (sea lamprey): 116949273
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Entry
116949273 CDS
T09614
Name
(RefSeq) nucleoporin GLE1-like
KO
K18723
nucleoporin GLE1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
pmrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116949273
03015 mRNA surveillance pathway
116949273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116949273
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116949273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
116949273
NCBI-ProteinID:
XP_032822280
UniProt:
A0AAJ7TQN4
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Position
36:complement(1235492..1247467)
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AA seq
484 aa
AA seq
DB search
MGACYSRTPKRERPSKKRHCKKHRCRHNRVKNGLDDHADASSPTTASPVVQEGGADTSCG
KEAPAEGQVIVPLSPLDITGRPLPHGDGEPPHASADNPLLLVEEKGPSEEEAERRDNEPE
VSSENVILEIITEERFSGIANSGDGGEDAPRLARECEPLEQAGGDWAEGSVPQRRHQELQ
RHLAETVERLKELNGNQDLKTKVMKFELAKASSMPINQISNTSGSHLRVITGKLDLLLSG
TAVVSGTRSTSVSDHPQGLLYVLHRVAERLVKQSEEEVGWNHAAVFPIAAVTVELWHRHP
ALGELLLAHLLSKCPYMGPVFPRPTPGQSQEDAFRILGYRFEDGRVENEDLFLQRMSGMA
RMYAAIISAPVPPSSGNKSHPHGMSHGWTWLMQVLDMEPMANVTPTVLFSFLEVAGNAMA
IAYGDQLWELLDGLRKEYIPRIEKVSIPQQMGTVVRLRLFLEDCFVNREIPLPSGHLSEE
FWKA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgtgctattcccgaactccgaagcgcgagcgtcccagcaagaagaggcattgt
aagaaacaccgctgcaggcataaccgtgtgaagaatggccttgatgaccacgccgatgca
tcctctcccaccacggcgtcaccggtggtgcaggaaggtggtgcagacacctcatgtgga
aaggaggcgccggcagagggccaggtcattgtgccgctctccccacttgacatcactgga
cgaccattgccccatggggatggcgagcctccccacgcctccgctgacaacccccttctc
ctggtcgaggagaagggacccagcgaggaggaggcggagcgacgcgacaatgagccggaa
gtcagctctgagaatgttatcctcgagatcatcactgaggagcgtttctctggaatcgcg
aacagcggtgatggtggcgaggatgcaccgcgtctggcacgcgagtgcgagccgctggag
caagcgggtggagattgggcggagggcagcgtcccgcagcgccgtcaccaagagctgcag
cgccacttggcggagacggtggagagactgaaggagctcaacggcaaccaggacctgaag
accaaggtcatgaagttcgagctggccaaggcctcgtcaatgcccatcaaccagatctcc
aacacgtctggttctcacctgcgcgtcatcaccggcaagctggacttgctgttgagcggc
acggccgtcgtgtcgggcacgcgctccaccagcgtgtcggaccacccgcagggcctgctc
tatgtcctgcaccgggtggctgagaggctcgtgaagcagagcgaggaggaggtggggtgg
aaccacgcggcggtgttccccatcgcggctgtcaccgtggaactgtggcaccgccaccca
gccctcggggagctcctgcttgctcacctgctcagcaagtgcccctacatgggccccgtc
ttccctcgtcccacgcctgggcagagccaggaggacgctttcaggatcctcggttaccgc
ttcgaggatgggagagtagagaacgaagacttgtttctccagagaatgtcgggcatggcg
cgcatgtacgcggccatcatctccgcgcccgtgcccccctccagtggcaacaagagccac
ccccacggcatgagtcacggctggacctggctcatgcaggtcctggatatggagcccatg
gccaatgtcacccccacggtgctcttcagctttctggaggtggcaggtaatgcaatggcg
attgcatacggcgatcagctctgggagctgctcgatgggttaaggaaagaatacatccca
agaatcgagaaagtatccatcccgcagcagatgggaactgtggtcagactgaggctgttc
ctcgaggactgttttgttaatcgggagattcctttgccaagcgggcatctctcagaagaa
ttttggaaggcttaa
DBGET
integrated database retrieval system