Petromyzon marinus (sea lamprey): 116949295 Help Entry 116949295         CDS       T09614                                  Name (RefSeq) collagen alpha-1(VII) chain-like   KO K16628   collagen type VII alpha Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:pmrn00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     116949295 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen VWA fn3 VWA_2 Kunitz_BPTI DUF4992 Motif Other DBs NCBI-GeneID:  116949295 NCBI-ProteinID:  XP_032822321 UniProt:  A0AAJ7X5S4 LinkDB All DBs Position 36:complement(2047322..2181939) Genome browser AA seq 2837 aa AA seqDB search MASAVSILGVLISLLAVFPQPPAHAQEAAAAVAPCGEAVRAVDVVFLVDGSWSIGRVLFQ EVKAFVEAAARLLLPALGRRGVRIGLAQYSDEPRSEFALTEHTRAATLLSALRSLPYKGG NTRTGEGLRFLRDVMFVPSATRPGVPKVAIVITDGKSQDGVSGPAQRLKDLGVIIFAVGI KNADKAELASMASDPPDAHSLYVEDFRALRTALPRIALRICERASGGPTGAPEEGDNDGD EEVDEGPTGDSNVLFGSRPPDPGLPLVSRFRVLDEGLHTLRVTWDGPQGKVLSYRLLYSV HGGSGGGGQEVIVGADATSHTLTDLAQDTAYALSIQAVSPTGPGPVVSTVGRTLKPQTVR QLLLQNVTTDAVRVAWSLVKGATGYRLTWAPAGGDPQSLSLGESYGFYQLQGLQAATDYE VLVNPVYGSVEGPTTTARTRTLTASSVQNLRASAESGSAIQVNWSVLPGATGYRLTWAPS SDITGRDRLEQMTLGGAVDRFLATGLVPGTEYVITLYALFQETQGPGISVAARMAGDLTT VQDFRVVSVDSSSITVTWTPLARATEYKLTWGLRSDPMPNPEFLDKTISTYRVEGLAWNT EYQVSIRPIYNDVEGPQSTLQQSTGGAVEPQLVGPVGDLQVVKVGSSSVRLAWSGVPGAT AYRVYWRLASGGGQGSQTVSPESTSHLVTGLQTDAAYLLEVSALQGNQEGPRKTVSAQTE GRDETQGFRVGGYTDGKLQLVWDRVAAATGYVLTWQSASAPEQTREQFVTLRPEQTSFNV ANLQMGRSYLFKLTPMHTTGEGQPASLTHLVVCSKARGDIVFLIDGSTSIGLENFALVRQ FLHRIASSFPTIGPDTTQVAVVQYSTDPRKEFLLNEYRDRELLLQAIRSLPYMGGNTRTG RAIEFALSTIFLRDAGMRPDTPNLLIVVTDGRSQDNVSAPAWHARAAGVRVYAVGVGSSD PAELRIITGEPEAGPLPGRRRSVYFADSFEDLTAIGEELAESVCQGAVEPVIPPRPVEPC VIQCPQGAKGEMGRRGAQGSPGLRGDLGPPGEPGVPGSGGGGEKGKKGERGLPGQDGLPG QPGRPGNPGPQGTQGPQGVQGPAGQPGEPGRSGLNGLMGSKGVKGEPGPVVDGSGGIPGR KGEPGPMGLPGSPGSPGLRGDTGPSGMPGAPGTAGMSIKGSKGEMGERGPAGSAAEFGEK GEPGLPGKQGLPGIIGPLGPPGVPGVHGDKGDAGLGLPGQPGKPGDPGEQGFRGPPGAMG PKGDPGPVGPVGSKGDRGERGVMGPAGDKGVAGSPGPLGPQGVPGLQGPPGPRGEKGELG PRGLDGESIKGSSGPPGLKGDRGPPGPHGPSGESGEAGQKGDKGSIGAGLPGGVGAKGEP GDRGPNGPLGRPGDKGEPGAKGDAGEPGRPGTPGPAGLRGKDGEKGDVGTPGAKGDAGPD GDSGPRGLRGPAGLNGAPGAKGDKGELGLLGRDGADGQAGTKGAKGEMGDAGIPGPPGKI VEIEKTVAGEKGEKGDLGDPGEDGINGAKGDRGSVGPVGDRGPEGPPGPPGTRGDSGERG PSGEKGERGASGVDGRNGIDGKDGLPGPPGTRGDPGKQGDAGRDGLPGLRGEAGLPGAPG PPGPLGLPGKAGDDGKAGIPGRDGEDGNPGEDGKKGDKGEPGLSGKDGRDGARGDRGDAG PSGPMGPPGQTGLPGPPGQVITVKGEGGTAVPGPQGPAGVPGIPGVPGPMGSQGDKGDTG QKGDKGEAGAHGTAGSPAESPDLEKYFESYGITMIAVKELTERGTGAGIVKPGEPGPSGE KGERGARGEPGERGLAGREGPAGLSGERGLKGDRGPSGPPGPPGPPGIVQADQGPPGPSG QDGDPGPPGGPGAPGKAGEPGVKGRLGERGDRGEKGEVGDSGLSGTPGIPGLPGPPGPPG SPGTSGNGFTEETAGRGPQGPQGPKGERGLAGDAGLKGDKGEAGERGMRGDRGEPGEKGK DGEPGIPGDPGEDGRDGKSGYQGYPGPAGHPGPSGDPGPPGSKGPAGLPGGPGPTGIKGE MGPPGQSQVGPPGLQGLPGPRGPNGAPGSLGLPGPPGLPGREGESGKPGVAGRDGVPGTA GLDGLPGKMGPPGPIGLTGPPGQAGDRGPHGQESPGAPGAKGDKGEPGEGLSGVTTLRGV KGEQGEKGDRGPEGSRGEKGMIGEPGDPGEIGFKGAHGERGSKGEPGVGTVGLPGSPGPP GPPGMVGAPGLPGERGLAGSTGPPGPTGPRGETGSPGTPGPSGEKGPLGFPGLDGSTGNP GPPGPLGPQGADGRAGEKGDKGEVGSGLPGPKGDKGHAGATGEDGRPGQPGPPGSAGALG THGARGDKGESGASGVKGDKGESVGVPGSEGSKGVKGEPGPRGLRGLDGERGERGEEGPH GEKGTKGDLGPRGPSGPPGLRGPAGEKGEPGEPGIPGDPGEDGMNGKNGTKGDKGDLGPR GERGERGEPGAKGKCGDNGLPGEQGDRGSVGKLGIPGKKGDKGDPGIPGVPGTPGQEGIM GPKGDRGQDGLAGPKGDMGDGGDRGFPGPPGPQGPSGALGRPGPPGVAGPIGPPGLEGIQ GQKGERGVPGDGQVGPRGVPGVPGQRGENGELGPDGPKGDKGESGMREGEVRDYIRQEMS KHCACGDRNVHVVVNTNDPDYEHVFVVEKLSDDQPQQQQAQDRHAKAAVASRERLARVAG HSRPTTFPAGPPGASGVAEKEEGLASVPWDEATWSHARAPGESEEHSEGLGEAPKRGSSD PQSRERRQITDVEEPDGRCRLDLDEGDCSRLALRWYYRRASHDCRLFVYTGCGGNGNRFE SRAECQAECRPQADPSR NT seq 8514 nt NT seq  +upstreamnt  +downstreamnt atggcgagcgccgtgagcatcctcggagttctcatctcgctgctggcggtgttcccacaa ccacccgcgcatgcacaggaagccgcggcggcggtggcgccgtgcggtgaggcggtgcgt gcggtggacgtcgtcttcctggtggacggctcgtggagcatcggccgagtgctcttccag gaggtgaaggcgttcgtggaggcggccgcgcgcctcctgctgcccgcgctgggccgcagg ggcgtgcgcatcggcctcgctcagtacagcgatgagcccaggtcggagtttgcgctcacg gaacacacgcgggcggcgacgctgctctccgctctgcgctcgctgccctacaagggcggg aacacgcgcaccggcgagggcctccgcttcctccgcgacgtcatgttcgtgccttccgcc acccggcccggcgtgcccaaggttgccatcgtgattacggatggaaagtctcaggatgga gtgtccggcccggcacagagactcaaggatctcggggtcatcatcttcgctgtgggcatc aagaacgctgacaaggcggagctggccagcatggcttccgacccgcccgacgcccactcg ctctacgtggaggacttccgcgcgctgcgcaccgcgctcccgcgcatcgccctgcggatc tgcgagcgagcgagcgggggccccacgggggcgcctgaggagggcgacaacgacggcgac gaggaggtggacgaggggcccacgggcgacagcaatgtgttgtttggctcacgtccaccc gaccccggcctcccgctcgtgtctcggttccgcgtgctggacgagggcctgcacacgctc agagtcacgtgggacggcccccaggggaaagtcctctcctaccgcctcctctacagcgta cacggtggatccggcggcgggggccaggaggtgatcgtgggtgccgacgcgacgtcgcac acgctgaccgacctggcgcaggacacggcctacgctctcagcatccaggccgtgtcgccc accggaccagggcccgtggtctccaccgtcgggaggacactgaagcctcagaccgtgcgc cagctgctgctgcagaacgtgacgacagatgcggtgcgcgtggcgtggagcctcgtcaag ggcgccaccggataccgcctcacctgggccccggcaggcggtgacccgcagagcctgagc ctgggggagtcctacggcttctaccagctgcagggcctgcaggccgccacggactacgag gtgttggtcaaccccgtgtacggctccgtcgagggtcccacgacgaccgcccgcacgcgc acactgactgctagctcggtccagaaccttcgagcgtctgcggagtctggcagcgccatc caggtcaactggagcgtcctgccgggagcgaccggctaccggctcacatgggcgccttcc tccgacatcaccgggagagaccgcctggagcagatgactctgggtggcgccgtggacagg ttcctggcgacggggctggtgccgggtacggagtacgtcatcaccctctacgccctcttc caggagacgcaggggcccggcatctccgtggcagcacgcatggccggcgacctgacgacg gtgcaggacttccgcgtggtctcggtcgactcgtcgtccatcaccgtgacgtggacgccg ctggcgagggccaccgagtacaagctcacgtgggggctgcgctccgatcccatgcccaat cccgagtttctggacaaaaccatcagcacatacagggtggaggggcttgcttggaatacg gagtaccaggtgtccatcagacccatctacaacgatgtggagggacctcagtccacgctg cagcagtcaactggcggggcggtggagccccagctggtggggcccgtgggagacctgcag gtggtgaaggtcggtagctccagcgtgaggctcgcctggagcggtgtccccggcgccact gcgtaccgcgtctactggcggctcgcgagcggcggcggacagggcagccagacggtgtct cctgaatccacatcgcacctggtcacgggtctccagacggacgccgcctacctgctcgag gtgtcggcgctgcagggcaaccaggaggggccccgcaagaccgtctcggcgcagaccgaa ggacgtgacgagacccagggatttcgtgtcgggggttacaccgacgggaagctgcagctc gtgtgggaccgtgtcgccgcggcaacaggatacgtgctcacctggcaatcagcgtctgcg ccggagcaaaccagggagcagtttgtgaccctgcgccccgagcagacgtcgttcaacgtc gccaatctgcagatgggtcgctcctacctcttcaagctcacccccatgcacaccacggga gaggggcagcccgcgtcgctcacccacctcgtcgtttgcagcaaggcccggggagatatc gtgttcctcatcgatggctccacaagcatcggcctggagaactttgccctcgtgcgacag ttcctccatcgcattgcctcctccttccccaccatcgggcccgacaccacgcaggtggcg gtggtgcagtacagcaccgacccacgcaaggagttcttgctgaacgagtaccgtgaccgc gagctgctgctgcaggccatccgcagcctgccctacatggggggcaacacacggaccggc cgggcgatcgagtttgcgctgtccaccatattcctccgcgacgccgggatgcgcccagac acccccaaccttctcatcgtcgtcacggacggccgctcccaggacaacgtgtcggccccc gcgtggcacgcccgtgccgccggcgtgcgcgtgtatgcggtgggagtgggcagctcagac ccggcggagctccgcatcatcacgggggagccggaggccgggcccttgccgggccgacgc cgctccgtctactttgccgactcgttcgaggacctgacggcgatcggggaggagctcgcc gagtccgtgtgccagggagcggtcgagcccgtcataccgccgaggcccgtggagccgtgc gtcatccagtgcccgcagggtgcaaaaggagaaatgggcaggagaggtgcacaagggtct ccaggtctacgaggagatttgggacctcccggcgagcccggcgttcctggcagcgggggc ggtggagagaaagggaagaaaggagagcggggtttgccaggccaggatgggttaccagga caacctggtcgcccgggcaacccaggtccgcagggaacacagggcccacagggggtgcag ggaccagccggccaaccaggtgaacccggccgctcgggtctgaatggcctcatgggaagc aagggagtgaagggggaaccgggccctgtggtggatggatccggagggattcccggccgg aaaggggagccaggcccaatgggcctccctgggtcccccggatcgcctggcctcagagga gacaccggtccttcgggtatgcccggcgcaccgggaacggcaggcatgtccatcaaggga agcaagggcgagatgggcgagaggggccctgcaggatcggcggcagagttcggagagaag ggggagccaggactgcccggcaagcagggtttgcctggcatcatcgggcctcttgggccc cctggcgttcctggggtccatggagacaagggggatgctggactgggtttgccagggcaa ccaggaaagccgggagatcctggcgagcagggcttccgtgggcctcctggagctatgggg ccaaagggtgatcctgggccagtcgggccagtgggctcaaaaggggacagaggagagagg ggagtcatgggtcctgctggcgacaagggtgtcgctggctctccagggcctctcgggcca cagggggttcccgggcttcaagggccacctggacccagaggagagaagggcgaactggga cccaggggcctggacggagaaagtataaagggctcatccgggcctccaggactaaaggga gacagaggaccccctggaccacacggccccagtggcgagtcgggcgaggccgggcaaaag ggcgacaagggcagcataggagccgggctgcctggcggtgtcggggccaagggggaaccc ggagatcggggccccaacggaccgctgggccggccaggtgacaagggtgagccaggagcc aagggcgatgccggagagccaggccgcccagggactccgggccctgccgggctccgaggg aaagacggtgaaaaaggagacgtgggtactcccggagcgaagggagatgctggtcctgac ggagactctggacccagagggctccggggtccggcagggctcaacggtgcccccggagcg aaaggggacaagggggagctgggcttgcttgggcgcgacggggctgatggccaggcgggg acaaagggtgccaaaggagagatgggagacgcaggaattccaggcccaccagggaaaatt gtggaaatcgagaaaacagtcgctggagaaaagggcgagaagggagacctcggggatccc ggcgaggacggcattaatggagccaagggggaccggggatcagtggggcccgtgggggac cggggccctgaaggacctcctgggcctccaggaacaaggggtgactcgggagagcgagga ccctctggggaaaagggagaaagaggagcgtctggcgtggacggcaggaacggaatcgat gggaaggacgggctgcctgggcctcccgggaccaggggtgaccccgggaagcagggcgac gcaggacgagatggcctcccaggcctgcggggggaggccggcctcccaggtgcccccgga cctccaggacccctcggtctcccgggcaaagcaggagatgatggaaaagcaggaattccc ggccgggacggagaggatggcaacccaggggaggatggaaaaaagggcgacaaaggggaa ccggggctgtcaggcaaagacgggagggacggagcaaggggcgatcgtggcgacgcgggt ccctccgggcccatgggccccccaggacagacgggcctacctggccccccaggccaggtg atcaccgtgaagggagagggtggcacggctgtcccaggacctcaaggacctgcaggcgtc ccaggcatccccggagtgccggggccaatgggttcacagggagacaagggggacactggg cagaaaggagacaagggtgaggccggagcccacgggactgcagggtcaccagccgaatcc ccggacctggagaaatacttcgagtcgtacggaatcacgatgattgcagtcaaggagctg acggagcgggggaccggagcggggatcgtcaagcctggcgagccggggccgtccggggag aaaggggagcgaggtgctcgaggggagcccggggagaggggcctggcgggcagagaggga cctgcgggactgtccggcgaacgtggtctgaaaggcgaccgtgggccgtcggggcctcca gggcctcccggacccccaggcatcgtgcaagctgatcagggtccccctggcccgtctggg caggacggagaccccggccccccaggaggaccgggcgccccaggaaaggctggagagcca ggggtcaagggtcgtttgggagagaggggcgatcgaggggagaagggcgaggttggcgat tccggactcagtggcacacctggcattccgggccttccagggcctcctggacccccagga tcgccgggaacatcagggaacggcttcacagaggagacagccgggagaggaccccaaggc ccccagggccccaaaggagagcgaggcctggccggcgacgcggggctcaaaggcgacaag ggcgaggcgggcgagaggggcatgagaggagatcgtggggagcccggagagaagggcaag gatggcgagcccggcattcctggagaccccggtgaggacggacgggacggcaagtcgggc tatcaaggctacccgggacccgcggggcatccgggaccttctggagaccccggaccccca ggaagcaagggaccggctggtctccccggtgggcctggccccactggcatcaagggagag atgggacctccaggacagtctcaagtgggaccgcccggccttcagggacttcctggtcct cggggccccaacggagccccaggatcacttggccttccaggaccaccgggtttgccaggc cgagagggagaaagcgggaagcccggagtggccgggagagacggagttcctggaactgcg gggctggatgggctcccgggaaagatggggcccccaggacccatcgggctcacgggcccc ccaggccaggcgggagaccggggaccccacgggcaggaatcgccgggagcgcccggggca aagggagacaagggtgagcctggggagggcctctctggagtcacaacgctccggggggtc aagggtgaacagggagaaaagggagaccgcggtcctgaagggtccaggggagagaagggc atgatcggagaaccaggagacccgggcgagatcggattcaaaggggcccacggagaaagg gggtcgaagggggagcctggcgtaggaaccgttgggcttccagggtcccctggcccccca ggacctcctggaatggtgggggctccaggtctccctggggagcgggggctcgcagggtcc accggcccaccaggacccacagggccccgcggggaaaccggcagccccggcacgcccggg ccctcgggcgagaaggggcctctgggcttccccgggctggacggatccactggaaatccc ggcccacccggccccctcggtccccagggagctgacggaagggcgggtgagaagggagac aagggcgaggtggggagcggcttgccaggccccaagggtgacaaagggcacgcaggagcc acgggcgaagacggccgacccggacagccaggcccaccaggctcagcgggggccctcggc acgcacggagctcgaggagacaagggggagtctggggcctcaggagtcaagggcgacaag ggagaatccgtgggggtccctggcagcgaaggcagcaaaggagtgaagggggagccgggc ccgaggggcttacggggactcgacggtgagaggggagagcggggagaggagggaccgcac ggggaaaagggcacgaagggagacctgggccccaggggcccgtcgggccctcctggtctc cgaggccctgccggagagaagggggaacctggtgaaccgggcatccccggggaccccggg gaggatggcatgaacgggaagaatgggacaaagggagacaaaggagaccttggcccccgg ggagaacgcggagagagaggagaacccggagccaagggcaaatgtggggacaacggactg ccgggggagcagggagacaggggctcggttgggaaactgggaatccctggcaagaaagga gacaagggtgaccctggcatccctggtgtgccaggtacgccgggccaagagggcatcatg ggacccaagggcgaccgtgggcaggacggactcgcaggccccaagggagacatgggagac ggtggagaccggggatttccagggccacccgggcctcagggacccagcggagccttgggt cgcccagggcccccgggtgtggccggaccgattgggcccccgggtctggaggggattcag ggccagaagggtgagcgaggagttccgggtgacggtcaggtggggcccaggggtgttcca ggggtcccggggcagcgtggcgagaacggtgaattgggtcccgatgggccgaagggagac aagggcgagtcggggatgagggaaggtgaagtgcgggactacatccgacaggagatgagc aaacactgcgcttgcggagacaggaacgtgcacgtggtggtgaacaccaatgaccccgac tatgagcacgtgttcgtggtggagaagctctccgatgatcagccacagcagcagcaggcg caggatcggcatgcgaaggccgcggtggcctcgcgcgagcgtttggcgcgggtggcgggc cacagcaggcccaccacgtttccagcggggccaccgggagcctccggggtcgcagagaaa gaggaggggctggcgagcgtcccctgggacgaggcgacgtggagccacgcccgggcaccc ggcgagtcggaggagcacagcgagggcctcggggaggctccgaagagagggagctcggat cctcaaagccgcgagcggcggcaaataacagatgtggaagagccggacggccgatgtcgg ctggacctggacgagggcgactgctcgcgcctcgctctgcgctggtactaccgccgcgcc agccacgactgccgcctctttgtctacacgggctgcggcggcaacggcaaccgcttcgag agccgcgccgagtgccaggcggagtgtcggccacaggccgaccccagcagatga

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