Petromyzon marinus (sea lamprey): 116949303
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Entry
116949303 CDS
T09614
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04510
Focal adhesion
pmrn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116949303
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116949303
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
DUF4715
Motif
Other DBs
NCBI-GeneID:
116949303
NCBI-ProteinID:
XP_032822334
UniProt:
A0AAJ7X5J9
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Position
36:2432994..2503638
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AA seq
1817 aa
AA seq
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MTPTLTAALLLWAGMSSLARGQQPDLPTSCTEGSCHPATGDLLLGREDRLSATSTCGMTA
PQQYCIVSHLMEDDKCFVCDSRQRQGPNSHRVQNVVMNFDPARKSAWWQSENGLERVSLR
LDLEAEFHFTHLIFTFKTFRPAAMLVERSSNFGRTWRPYRYFAQDCRSAFPGVREGPVQR
PGDVVCDSRYSDIEPSTGGEVIFKVLDPSIPVPDPYSPEIQDLLRVTNLRVNFTALHTLG
DERLDFSPDARRKYYYSVYDMVVRGSCSCNGHAESCVPTGRGDAGASTEGMVHGRCLCKH
NTVGLNCDECDDFYQDHPWRPAQGRRTHACKRCECNGHAMRCHFDLAAYVASGNVSGGVC
DGCRDNTAGRQCETCSPFHYRHARRDARAPDSCVPCDCDPAGSQEGGACDATSDPRTGTV
AGQCRCKPGVGGVRCDQCLPGFAGTPSRDNPYGCQPCRCNVMGTVMNMGACDPATGACIC
KRYVGGRNCERCLAGYWGLSESAGGCQPCDCDFGGSVDETCSAEDGQCQCRPHMLGRRCE
EVQPGYYCMPLDLYTSEAEDATFLPVQPLHGGSVGNTSDCDEFMQVPGHNSPGGPGSSAN
LPVVVVAGSAAPGTLVTWTGPGYARIRDGAGLEFTVSNIPYSGEYRVAIRYKPELNEPWE
AQVQVLSQSLPTQSRCANMLPSDEMQIVPLNPTQSVASMPVAVCLETGVRYVVRVVVQRA
RSTRRHPNAHMLVDSLVLFPHVPSLPGFSGSAGQKRREELERYMCLDAYRDATRPMLAEA
CRPLVCAISSILHNGPLPCECNPQGVTSSVCEVLGGHCLCRPNVIGRRCDACSPGTFGFG
PQGCQRCACDPAGTTGGTCDAASGQCLCLPGVAGRECSRCDSGRFGFPRCAPCQCDGRAR
DCDPESGQCQECLEHSTGENCDRCEPGYYGDPRLGSGGRCRPCQCPGEPGSGRFFATTCS
TDPATRGAVCQCLPGYTGTRCEACAPGFSGDPSVAGRPCSSCDCSGNVDPRDPKACDPVS
GRCQRCLHNTHGERCEKCRTGFYGDALRQDCKPCSCIEAGTEPASCPGGAQPCRCDARTG
QCRCRAGVEGSSCDRCALGHWGLGGSGGCQPCACNPARARGQTCDPVTGQCECRPGFGGR
TCDDCGPNHWGSPDKGCKPCDCHPQGGTCDATSGRCVCRDGVTGARCDACSRGAAGDFPA
CKPCHACFSWWARKIEALCARATALRDRAEKLADTGISGAYDGRFEELEKKLKEAQDIIA
KGNERPSDVARLEMLRDNIRRQLDRLTQLVSVAEATVKSLQSQRDRTDLDLDALERDALR
LNASAALAYSRLQGILNSDFSGAFDSIRRSWQDSRNAQKQAETATGGPSGPVRASQKARR
RAEDLMRHGGGAPGDPSLAERLANSKKSLDELDREVAALSVKRINEKTCGAPGDLPCSES
RCGGGGCRDNAGRPACGGPGCGGSLTLAQDSLARARNAELEVERASAELDKMAAKVAEVK
RAASDMRDKAQRSLDRAQQSKAGMEHAVAELRDLIARIKEFLNEEGADPESIMLVANNVL
KLGLPVTPGEAEALAQQIRDSVARLSDVDAILAQTAKNMTLAQRLLADAKKAKADAEAVK
QKTEEVVQALQEANDAQSAARKAINNAQRDIDSAKDRIDEAGKKAGDAGAILMDAMDRLT
KMAADVQALKEKAAANQLAAKDAATQAARARDNADVAADELQEVKDKFKDMQGLMDSRYN
GSDKARERAEKLRDQASQLLQDVQDKMKRLNDLEKLLESQADKLVDATGKLDGLEERASK
LQMEISKRVQHYFACQN
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccaccctcaccgccgctctcctgctgtgggcaggcatgagtagcctggcgcgg
gggcaacagccagacctgcccacgagctgcacggagggcagctgccacccggcgacggga
gaccttctcctgggccgcgaggaccgcctctccgccacgtccacgtgcggcatgaccgcg
ccgcagcagtactgcatcgtcagccacctcatggaggacgacaagtgcttcgtgtgcgac
tcgcggcagcgccagggccccaacagccaccgcgtccaaaacgtcgtcatgaacttcgac
cccgcgcgcaagagcgcgtggtggcagtcggagaacggcctggagagggtgagcttgcgg
ttggacctcgaggcggaattccacttcacgcacctcattttcacgttcaagacattccgc
ccagcggccatgctggtggagcgttcgtccaacttcgggcggacgtggcggccgtaccgc
tacttcgcgcaggactgccgctccgccttccccggcgtgcgggaggggcccgtgcagcgt
cccggcgacgtcgtgtgcgactctcgctactccgacatcgagcccagcacgggcggggag
gtcatcttcaaggtgcttgatccgtccatccctgttcctgacccctacagccctgagatc
caagacctgctgcgcgtgacgaacctgcgcgtgaacttcacggcactgcacaccctcggg
gacgagcgcctggacttcagccccgacgcgcgccgcaagtactactacagcgtgtacgac
atggtggtgcggggcagctgctcctgcaacggccacgccgagtcgtgcgtccccaccggg
aggggagacgccggcgcttccaccgagggcatggtgcacgggcgctgtctgtgcaagcac
aacacggtgggactcaactgcgacgagtgcgacgacttctaccaggaccatccctggagg
ccggcgcaggggcgacgcacgcacgcttgtaaacgctgcgagtgtaacggccacgccatg
cgctgccacttcgacctcgccgcctacgtcgccagcggcaacgtgagcggcggggtgtgc
gacggttgccgcgacaacacggcgggacggcagtgcgagacgtgctcgcccttccactac
cgccacgcgcggagggacgcacgcgcccccgactcctgcgtcccgtgcgactgtgacccg
gccggctcgcaggagggcggtgcatgcgacgcgacctccgacccccgtacgggcaccgtg
gcggggcagtgccgctgcaagccgggcgttggaggggtgcggtgcgaccagtgtttgccc
gggtttgccggcacgccctcccgcgacaacccctacggctgccagccgtgcaggtgcaac
gtgatggggaccgtcatgaacatgggcgcgtgcgatcccgccacgggcgcctgcatctgc
aagcgctacgtgggcggcaggaactgcgagcggtgcctggcgggctactgggggctcagc
gagtcggccggcggctgccagccgtgcgactgcgacttcgggggctcagtggacgagacg
tgctcagcggaggacgggcagtgccagtgccgcccacacatgctggggcgccgctgcgag
gaggtgcagcctggatattactgcatgccccttgacctgtacacctcggaggccgaggac
gccacgttcctgcccgtgcagccgctgcacggaggctctgtcgggaacacgtcggactgt
gacgagttcatgcaggtcccaggccacaacagtccgggcggtcccggctccagcgccaat
ctcccggtggtggtggtggccggaagcgccgcgcccggcacgcttgtcacgtggacgggg
cccggctacgcgcgaattcgcgacggcgccggcctcgagttcaccgtcagcaacattccc
tactcgggcgaatacagggtggccatccgctacaagccggagctgaacgaaccgtgggag
gcgcaggtccaggtgctgtcccaatcgttgcccacgcagagccgctgtgccaacatgctc
ccgtccgacgagatgcagatcgtgcctctcaaccccacgcagagcgtggcgtcgatgccc
gtggccgtgtgtctggagacgggcgtgcggtacgtggtgcgggtggtggtgcagcgggca
cggtccacgcgcaggcaccccaacgcgcacatgctcgtcgactcgctggtgctgttcccg
cacgtcccttcgctgcccggattctcgggcagcgccggtcagaagcggcgcgaggagctg
gagcgctacatgtgcctggacgcgtaccgcgacgccacgcggcccatgctggccgaagcc
tgccgccccctcgtgtgtgccatctccagcatcctgcacaacgggcccctgccgtgtgag
tgtaacccccagggtgtgacgagctccgtgtgcgaggtgctcggtggccactgcctgtgc
cgccccaacgtcatcggccggcgctgcgacgcctgcagcccggggaccttcggcttcggg
ccgcagggctgccaacgctgcgcgtgcgaccccgccggcaccacggggggcacgtgcgac
gccgcgagcgggcagtgcctgtgcctgccaggcgtggcggggcgcgagtgctcgcgctgc
gactcgggccgcttcggcttcccgcgctgcgccccctgccagtgcgacggccgcgccagg
gactgcgaccccgagagcggtcaatgccaggagtgcctggagcattctaccggagagaac
tgtgacaggtgcgagcccggttactacggcgacccgcgcctgggctccggcgggcgttgc
cggccgtgccagtgccccggcgagccgggcagtggccgcttcttcgcgacgacgtgcagc
acggaccccgcgacgcgcggcgcggtgtgccagtgcctcccggggtacacggggacgcgg
tgcgaggcctgcgccccgggcttcagcggcgacccgtccgtggccgggcggccgtgctcg
tcgtgcgactgcagcggcaacgtggacccgcgcgaccccaaggcctgcgaccccgtgagc
ggccgctgccagcgctgcctgcacaacacgcacggcgagcgctgcgagaagtgccgcacc
ggcttctacggcgacgccttgcggcaggactgcaaaccctgcagctgtattgaggccggc
acggagcccgccagctgccctggcggtgcgcagccgtgccgctgcgacgctcgcaccggg
cagtgccggtgccgggcgggcgtcgagggcagctcgtgcgaccgctgcgcgctgggacac
tggggcctggggggcagcggtggctgccaaccgtgcgcctgcaacccggcgagggctcgc
ggccagacctgcgacccggtgaccgggcagtgtgagtgtcgcccagggtttggaggtcgc
acgtgcgacgattgtggccccaaccactgggggtctcccgacaagggatgcaagccgtgc
gactgccacccccagggcggcacgtgcgacgccacgagcgggcgctgcgtgtgccgcgac
ggcgtgacgggcgcgcgctgcgacgcgtgctcccgtggcgcggccggagacttcccggcc
tgcaagccgtgccacgcgtgcttctcgtggtgggcgcgcaagatcgaggccctctgcgcc
cgcgccaccgccctgcgggaccgcgccgagaagctcgccgacacggggatctccggcgcc
tacgacggccgatttgaggagctggagaagaagctgaaggaggcgcaggacatcatcgcc
aagggcaacgagcggcccagcgacgtggcgcgcctcgagatgttgcgcgacaacatcagg
cggcagctggatcgtctgacgcaactcgtctcggtggccgaggcgaccgtgaagtctctt
cagagtcagcgcgaccgcaccgacctcgacctggacgctctggagcgcgacgccctgcgg
ctgaacgcgtcggctgccctggcctactccaggctgcagggcatcctcaactctgacttc
agcggcgccttcgacagcatccggcgctcgtggcaagactcgcgcaacgcccaaaagcag
gcggagacggcgaccgggggaccgtcggggcccgtgcgcgcctcccagaaggcccggcgg
cgcgcggaggacctgatgcggcacggcggcggcgcccccggcgacccgtcgctggccgag
cgtctcgccaacagcaagaagagcctggacgagctggaccgcgaggtggcggcgctgagc
gtcaagcgcatcaacgagaagacgtgcggcgcccccggcgacctgccgtgctccgagtcg
cgctgcgggggcggtggctgccgggacaacgctggccggccggcgtgcggtggccccggt
tgtggcgggtccctgacgctggcgcaggactcgctggcgcgcgcccgcaacgccgagctc
gaggtcgagagggcgtcggcagagctcgacaagatggccgctaaggtggccgaagtgaag
cgcgcggcgagcgacatgcgcgacaaggcgcagcgctcgctcgaccgggcgcagcagagc
aaagccgggatggagcacgccgtggccgagctgcgggacctcatcgcccggatcaaggag
ttcctcaacgaggagggcgcggacccagagagcatcatgttggtggcaaacaacgtcctc
aagctagggctgcccgtgacgcccggggaggccgaggcgctggctcagcagattcgcgac
agcgtggcacgcctctccgacgtcgacgccatcctggcgcagacggccaaaaacatgacc
cttgcccagcgcctgctcgccgacgccaaaaaagccaaggcggatgctgaggcggtgaag
cagaagaccgaggaagtcgtgcaagcactgcaggaggccaacgacgctcagagcgcggct
cgcaaggccatcaacaacgcccaacgcgatattgactcggcaaaggaccgcatcgatgag
gcaggcaagaaggctggggacgcgggagcgatattgatggatgccatggatcgtctcacc
aagatggccgccgacgtccaagcgctcaaggagaaggccgcagccaatcagctggcggcc
aaggatgccgcgacgcaggccgcccgggcgcgcgacaacgccgacgtcgccgcagatgag
ctgcaagaagtgaaggataaatttaaagacatgcaagggctgatggattcgcggtacaat
ggcagcgacaaggccagggagcgcgccgaaaagctgcgcgaccaggcatctcagctgctc
caggacgtgcaggacaagatgaagcggcttaatgacttggagaagctgctggaatcgcag
gcagacaaactggtggatgccaccggcaagctggatggcctggaggaaagagcctccaaa
ctgcagatggaaatcagcaaaagggtgcagcactactttgcgtgccagaactga
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