Petromyzon marinus (sea lamprey): 116949326
Help
Entry
116949326 CDS
T09614
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
KO
K14004
protein transport protein SEC13
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
pmrn04141
Protein processing in endoplasmic reticulum
pmrn04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116949326 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116949326 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
116949326 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116949326 (SEC13)
04131 Membrane trafficking [BR:
pmrn04131
]
116949326 (SEC13)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116949326 (SEC13)
Membrane trafficking [BR:
pmrn04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116949326 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116949326 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
116949326 (SEC13)
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116949326
NCBI-ProteinID:
XP_032822377
EnsemblRapid:
ENSPMAG00000028553
LinkDB
All DBs
Position
36:3707660..3715167
Genome browser
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDIKNGGQILAADLRGHEGPV
WQVAWSHPMFGSVLASCSYDRKVIVWREENGKWDKLHEYAGHDSSVNSVSWAPHEFGLVL
ACGSSDGCISVLSCQADGTWEAKKVSNAHTIGCNAVSWAPAVIPGSLLEQPSGQKPALTR
RFVSGGCDNLIKIWKEEDGQWQEEQKLEAHSDWVRDVAWAPSIGLPVSTIASCSQDGRVF
IWTCDDLSESSWAPKLLHKFNDVVWHVSWSITGNILAVSGGDNKVSLWKESVDGQWVCVS
DVNKGQGVAPGVGDAHQTEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgtaataaacaccgttgatacttcccacgaggacatgattcatgacgcccag
atggattactatggtacccgccttgccacttgctcttccgaccgatcggtcaaaatcttc
gacatcaagaatggaggacaaatcctcgctgccgatctcaggggacatgagggtccggtg
tggcaggtggcgtggtcccaccctatgtttgggagcgtgctggcctcgtgttcatacgat
cgcaaagtaattgtgtggcgagaggaaaatgggaaatgggataaactgcacgagtacgcc
gggcatgactcctctgtgaactctgtatcgtgggctccccatgagtttggtctggttctg
gcctgtggcagttccgatgggtgcatctcagtcctgtcatgccaggctgatggtacctgg
gaggctaagaaagttagcaatgctcacacaattgggtgcaatgctgtcagctgggctcct
gcagtcattcctgggagcttattggagcagccttctggccaaaaacctgcgcttactcgt
cgatttgtatcagggggctgcgacaatctcataaagatctggaaggaggaggatggccag
tggcaggaggaacagaagctggaggcacacagcgattgggtgcgcgatgtagcgtgggcg
ccctctatcggtctccctgtcagcaccatcgccagctgctcgcaggatggtcgcgttttc
atctggacgtgtgacgatttgtccgagagctcttgggcacccaagctccttcacaagttc
aatgatgttgtgtggcatgttagctggtccatcactggcaatatcctggctgtttctggt
ggagataacaaggtgagcctgtggaaggagtctgtggatgggcagtgggtgtgcgtgagt
gacgtcaacaaaggacagggagttgctccgggtgtaggagatgcccatcagacggaacag
tga
DBGET
integrated database retrieval system