KEGG   Petromyzon marinus (sea lamprey): 116949326
Entry
116949326         CDS       T09614                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03013  Nucleocytoplasmic transport
pmrn04141  Protein processing in endoplasmic reticulum
pmrn04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116949326 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116949326 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    116949326 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116949326 (SEC13)
   04131 Membrane trafficking [BR:pmrn04131]
    116949326 (SEC13)
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116949326 (SEC13)
Membrane trafficking [BR:pmrn04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    116949326 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    116949326 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    116949326 (SEC13)
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 116949326
NCBI-ProteinID: XP_032822377
EnsemblRapid: ENSPMAG00000028553
LinkDB
Position
36:3707660..3715167
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDIKNGGQILAADLRGHEGPV
WQVAWSHPMFGSVLASCSYDRKVIVWREENGKWDKLHEYAGHDSSVNSVSWAPHEFGLVL
ACGSSDGCISVLSCQADGTWEAKKVSNAHTIGCNAVSWAPAVIPGSLLEQPSGQKPALTR
RFVSGGCDNLIKIWKEEDGQWQEEQKLEAHSDWVRDVAWAPSIGLPVSTIASCSQDGRVF
IWTCDDLSESSWAPKLLHKFNDVVWHVSWSITGNILAVSGGDNKVSLWKESVDGQWVCVS
DVNKGQGVAPGVGDAHQTEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttctgtaataaacaccgttgatacttcccacgaggacatgattcatgacgcccag
atggattactatggtacccgccttgccacttgctcttccgaccgatcggtcaaaatcttc
gacatcaagaatggaggacaaatcctcgctgccgatctcaggggacatgagggtccggtg
tggcaggtggcgtggtcccaccctatgtttgggagcgtgctggcctcgtgttcatacgat
cgcaaagtaattgtgtggcgagaggaaaatgggaaatgggataaactgcacgagtacgcc
gggcatgactcctctgtgaactctgtatcgtgggctccccatgagtttggtctggttctg
gcctgtggcagttccgatgggtgcatctcagtcctgtcatgccaggctgatggtacctgg
gaggctaagaaagttagcaatgctcacacaattgggtgcaatgctgtcagctgggctcct
gcagtcattcctgggagcttattggagcagccttctggccaaaaacctgcgcttactcgt
cgatttgtatcagggggctgcgacaatctcataaagatctggaaggaggaggatggccag
tggcaggaggaacagaagctggaggcacacagcgattgggtgcgcgatgtagcgtgggcg
ccctctatcggtctccctgtcagcaccatcgccagctgctcgcaggatggtcgcgttttc
atctggacgtgtgacgatttgtccgagagctcttgggcacccaagctccttcacaagttc
aatgatgttgtgtggcatgttagctggtccatcactggcaatatcctggctgtttctggt
ggagataacaaggtgagcctgtggaaggagtctgtggatgggcagtgggtgtgcgtgagt
gacgtcaacaaaggacagggagttgctccgggtgtaggagatgcccatcagacggaacag
tga

DBGET integrated database retrieval system