Petromyzon marinus (sea lamprey): 116949353
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Entry
116949353 CDS
T09614
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04020
Calcium signaling pathway
pmrn04218
Cellular senescence
pmrn04260
Cardiac muscle contraction
pmrn04261
Adrenergic signaling in cardiomyocytes
pmrn04270
Vascular smooth muscle contraction
pmrn04530
Tight junction
pmrn04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116949353
04020 Calcium signaling pathway
116949353
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
116949353
09144 Cellular community - eukaryotes
04530 Tight junction
116949353
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
116949353
09153 Circulatory system
04260 Cardiac muscle contraction
116949353
04261 Adrenergic signaling in cardiomyocytes
116949353
04270 Vascular smooth muscle contraction
116949353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116949353
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116949353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
DDHD
Motif
Other DBs
NCBI-GeneID:
116949353
NCBI-ProteinID:
XP_032822456
UniProt:
A0AAJ7X5W9
LinkDB
All DBs
Position
36:complement(5700344..5918806)
Genome browser
AA seq
2258 aa
AA seq
DB search
MHQSGDTNEAGTKHAAESCGRSLSNGGGGGAGESNSSQGFLSWQAAIAAAKEAKEAEEMS
RAAEGEAGAAAAPGAAANAAQRKRQQYAKTKKQGSNANDRPPRALFCLDLNNPLRRACIS
LVEWKPFDLFILVAIFANCVALAVYIPFPEDDSNETNHNLEKVEYAFLIIFTIETFLKIL
AYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLEQVTKVGEGGSPMGGKSGGFDVKALRA
FRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTC
FYVNTDTMVEDDPTPCAFAGHGRQCAMNGTVCRGGWPGPNGGITNFDNFFFAMLTVFQCI
TMEGWTDVLYWVNDAIGNEWPWMYYVSLIIVGSFFVLNLVLGVLSGEFSKEREKAKARGD
FQKLREKQQLEEDLKGYLDWIMQAEDIDPENEDETGGDGKPRSRITLADLTDKKKGRFAW
FSHSNETHASIPASDADSVNTENTGHEAESLCCCVRLALAISKSKFSRRWRRWNRFCRRK
TRLTVKSTGFYWVVIILVFLNTLTIASEHYNQPDWLTQVQDIANKVLLAMFTVEMLTKMY
SLGLQAYFVSLFNRFDCFVVFGGIIETILVEFGVMSPLGISVLRCVRLLRIFKVTKYWAA
LSNLVASLLNSMRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQSL
LTVFQILTGEDWNAVMYDGIMAYGGPSSTGMLVCIYFIILFICGNYILLNVFLAIAVDNL
ADAESLNTAQKEDEEEKEKKKSARAEKNGKLEKKEDGEKGKLDKIADASTKLQITADDGK
KALPSSGSHAADEAAEEEEEHLGEGEEEEEEEEEEDEEEPDMPSGPRPRRLSDLNLKEKV
VPIPEGSAFFIFSSTNPVRVCCHRLIHHHIFTNLILAMIMLSSVSLAAEDPIRNHSFRNN
ILGYFDYAFTAIFTVEILLKMTSYGAFLHKGSFCRNYFNLLDLLVVGVSLVSFGIQSSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLF
KGKFYSCTDEAKHNPEECKGTYIVFKDGDVNQPMIRERNWHNNDFNFDNVLTGMMALFTV
STFEGWPALLYKAIDSNAENSGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIITFQE
QGEKEYENCELDKNQRQCVEYALKAKPFRRYIPKNPYQYKFWYVVNSTAFEYVMFVLIML
NTLCLGMQHYNQTFLFNYAMDILNMVFTGLFTVEMVLKIIAFKPRGYFSDPWNVFDSLIV
IGSIIDVVLSEIDPTGTCPLDDDVPVADTSFDLPTMSSEDSSRISITFFRLFRVMRLVKL
LSKGEGIRTLLWTFIKSFQALPYVALLIVMMFFIYAVIGMQIFGKIAMQDGMQINRNNNF
QTFPQAVLLLFRCATGEAWQEILLGCMSGRRCDPESDYNVGEEFTCGSNFAIIYFISFYM
LCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLL
RRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTSLKIKTDGNLDQA
NEELRAVIKKIWKRTSMKLLDQVIPPSGDDEVTVGKFYATFLIQDYFRKFKRRKEQGVLG
KHPARSTTMALQAGLRTLHDIGPEIRRAISGDLQEEDATSVHSQEEEEAIFRRSGGLFSD
SVGPQPSSERKDTLPQSLATQRPLQLPKNTEDDRHQGSCGQDAEEGPESHLLGNHHVQPG
QNGAKLPGSPPNSNINNGNNSHLPAAGNCKGGLFPSDTGQHASLHHPNGTVRRASAKSRN
RYYETYVRSSTGDGRVPVIQREAAVDDEDGYAAEPSFYSDDEEGSPLTMDRQYYKESSGR
YRGADRQYDEPLTHTSSCRSHDKELSRNPQRRRLLPPTPPGRRPSFNIDCLRRQSSLESD
LPMSLNYAPNSSLPLRLAQQQVLAVAGLDGFAAEHRRHSSAHATSSWATPPATPSSTPGR
GSSYHNSRTMPPSLAPPSLPSPTSSLPRPPYYTPAILIERADSRTSATSALLHHHHQHHH
GGKLNGSLPSVDRSSWYTDGPDAPYRSFVPGGLAVPSARLRDRYAETRGSADSLVEAVLI
SEGLGRFARDPRFVAVTKHELADACEMTMDEMESAASHLLNGSPTTGGGGGLHARSAPVT
PRRDYDPQDFGSGASDDEPVHVKYDEDLSDEMICVTTL
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagtcgggagacaccaatgaagcaggcacaaagcatgcggctgaaagttgcggg
cgcagcctatccaacgggggcggcggcggcgctggggagtccaactccagccagggcttc
ctgtcctggcaagcggccatcgccgcggccaaagaagccaaagaggccgaggagatgagc
cgggcggccgagggcgaagcgggggcggccgccgccccgggggctgccgcgaacgcggct
cagcgcaagcggcagcagtacgccaagaccaagaaacagggcagcaacgccaacgaccga
cccccgcgggccctcttctgcctcgatctgaacaatccgctgcgacgcgcgtgcatcagc
ctcgtcgagtggaagccatttgatttgtttatcctcgtggcaatatttgccaactgcgtg
gccttagccgtctacatcccctttccagaggacgactccaatgaaacaaatcacaatctg
gaaaaagtggaatatgcgttcctaattattttcacaatcgaaacgttcctgaagatcttg
gcgtatggactcgtcatgcatcccagctcctacattcgcaacgggtggaacctgctcgac
ttcgtcatcgtcatcgtggggttgttcagcgtcgtgctggagcaggtgacgaaggtggga
gaaggcggcagccccatgggagggaagtcgggaggcttcgacgtgaaggcgctgcgagcg
ttccgcgtgctgcgcccgctgcgactcgtctccggcgtgcccagcttgcaggtcgtgctc
aattccatcatcaaggccatggtccccttgctccacatcgccctcctcgtcctcttcgtc
atcatcatctacgccatcatcggcctcgagctcttcattggcaaaatgcacaaaacctgc
ttctacgtcaacaccgacacgatggtggaggacgacccaacgccgtgcgccttcgcgggc
cacggccgacagtgcgcgatgaacggcaccgtttgccggggcggctggcccggccccaac
ggcggcatcaccaacttcgacaatttcttcttcgccatgctcaccgtgttccagtgcatc
accatggagggctggaccgacgtgctgtactgggtaaatgatgcgattgggaacgagtgg
ccatggatgtattatgttagtttaatcatcgtaggctcttttttcgtgcttaacctggtg
ctcggtgtgctgagcggagagttctccaaagagcgagagaaggccaaggctcgcggagac
ttccagaagctgcgggagaaacagcagctggaggaagacctcaagggttacctggactgg
atcatgcaggccgaggacatcgatccggaaaacgaggacgagacaggcggggatggaaag
ccacgcagcaggataacattggccgatctgaccgataagaagaagggaaggtttgcttgg
tttagccactccaatgagacccatgcgagcatccctgccagcgatgccgactccgtcaac
acggagaacacagggcacgaggccgagtccctctgctgctgcgtgcgcctggcattagca
atttctaagtcaaagttcagccggcggtggcggaggtggaaccggttctgcagaaggaag
acacgtctcacggtgaagtccactggcttctactgggtcgtcatcatcctggtcttcctc
aacacgctcaccatcgcctctgagcactacaaccagcctgactggctcacgcaggtccaa
gacatcgccaacaaggtgctgctggcgatgttcaccgtggagatgctcaccaagatgtac
agcctgggcctgcaggcctacttcgtgtcgctcttcaaccgcttcgactgcttcgtggtg
ttcggcggcatcatcgagacgatcctcgtggagttcggtgtcatgtcgcccctgggcatc
tccgtgctccgctgtgtgcgcctcctccgcatcttcaaagtcaccaagtactgggccgcc
ctgagcaacctggtggcttcgctgctcaactccatgcgatccattgcctccctgctgctg
ctccttttcctcttcatcatcatcttctcgctgctcggcatgcagctcttcgggggcaag
ttcaacttcgacgagacgcagaccaagcgcagcacgttcgacaacttcccgcagtctctg
ctcaccgtgttccagatcttgacaggagaggactggaacgctgtcatgtacgacggcatc
atggcgtacggtgggccctcctccacgggaatgctcgtgtgcatctacttcatcatcctc
ttcatctgcggtaactacatccttctgaacgtgttcttggccattgccgtggacaacttg
gctgacgctgaaagtctcaacactgcgcagaaagaggacgaggaggagaaggaaaagaaa
aagagtgccagggcagagaaaaatggcaagttggaaaagaaagaggacggggagaagggc
aaactcgataaaatcgctgatgccagcaccaagttgcagattactgccgacgacgggaag
aaggctcttccatcctccggatctcacgccgcagatgaggcggcggaggaggaagaggag
cacctcggcgagggggaggaagaggaggaagaagaggaggaggaggacgaggaggagccg
gacatgccctctggtcctcggccccgtcgcctctctgacctcaacctgaaggagaaagtg
gtccccattccagaggggagcgctttctttatcttcagcagcacgaaccccgttcgagtg
tgttgccatcgccttattcatcatcacattttcacaaacctcattttggccatgatcatg
ctgagcagtgtttctttggccgcggaggacccaattcgcaatcattctttccgaaacaac
attctcggttactttgactatgcttttacagccatcttcactgttgagatcctcctgaag
atgacctcctacggtgcgttcctccacaaaggctccttctgtaggaactactttaacctc
cttgacctcctcgtggttggcgtttctctggtctcctttggaattcaatcaagcgccatc
tccgtggtaaagatcctccgcgtgcttcgagtgctgaggcctctcagggccattaacaga
gcaaaaggcctcaagcacgtggtccagtgcgtgttcgtggctattcggaccatcggcaac
atcatgatcgtcaccacactgctgcagttcatgtttgcctgcattggagtgcagctcttc
aaggggaagttctacagctgcacggacgaggccaagcacaaccccgaggagtgcaaggga
acgtacatcgtgttcaaggacggcgacgtgaaccagccgatgatccgcgagcgcaactgg
cacaacaacgacttcaacttcgacaacgtcctcacgggcatgatggccctcttcaccgtc
tccacctttgagggatggcccgcgttgctgtacaaggcgattgactccaacgcagagaac
tctgggcccatctacaactaccgcgtagaaatctccatcttcttcataatctacattatt
atcatcgccttcttcatgatgaatatcttcgtgggtttcgtcatcatcaccttccaggaa
cagggagagaaggagtacgaaaactgtgagcttgacaagaaccagcgtcagtgtgtggag
tatgccctcaaagccaagcccttccgccgatacatccccaagaacccataccagtacaag
ttctggtacgtcgtcaactcaaccgccttcgagtacgtcatgttcgtgctgatcatgctc
aacaccctctgccttggcatgcagcattacaaccaaaccttcctgtttaactacgccatg
gatatcctcaatatggtgttcactgggctcttcactgtggagatggtcctcaagataatt
gccttcaaaccgaggggctattttagtgacccctggaacgtgtttgactccctcatcgtg
attggcagcattatagacgtcgttctcagtgaaatcgacccaactggaacttgcccttta
gatgatgatgttcctgtcgctgatactagttttgatctgcccacgatgagttccgaggac
agctcccgcatctccatcacattcttccgtctcttccgtgtgatgagactcgtcaagctc
ctaagcaagggagagggcattcgcaccctcctgtggaccttcataaaatcattccaggcc
ctgccatatgtcgccctgcttatcgtgatgatgtttttcatctacgccgtgatcggaatg
cagatatttggaaaaatcgcgatgcaagatggaatgcaaatcaaccgcaacaacaacttt
caaacattccctcaggctgtgctcctgcttttccgttgtgcgacgggcgaggcgtggcaa
gagatcttgcttgggtgcatgtccggccggcgctgcgaccccgagtcagactacaacgtt
ggggaagagttcacctgcggcagcaatttcgccatcatctacttcatcagcttctacatg
ctgtgcgccttcctgatcatcaacttgttcgtggccgtcatcatggacaactttgactac
ctgacgcgagactggtccatcctggggcctcatcacctcgacgagttcaagaggatctgg
tctgagtacgacccagaagccaagggacgaataaaacatctggatgttgtcacactcctg
agaaggatccagcctcccctggggttcggtaaactgtgtccgcatcgcgtcgcctgcaag
aggctggtctcaatgaacatgccgctgaacagcgacggcacggtcatgttcaacgcaacg
ctgttcgccctggttagaacgtccctcaagattaaaacggacgggaatttggaccaagcc
aacgaggagctgagagcagtgatcaagaagatctggaagaggaccagcatgaagctgctg
gaccaggtcatccctccgtcaggtgatgacgaggtgacggtgggcaagttctacgccacc
ttcctcatccaggactacttccgcaagttcaagaggaggaaggagcagggggttctggga
aagcacccggcccggagcaccacgatggccctccaggcgggcttgcggacgctgcatgat
atcggtccagagatccgcagagccatctcgggtgacctgcaggaggaggacgcgacgtct
gtgcactcgcaggaagaagaggaagccatcttccggagatccgggggtctcttcagtgac
tccgtggggccacagccatcgtccgaaaggaaggacaccctcccgcagagcctggccact
cagcggccgctgcagctgcccaagaacacggaggacgaccgccaccagggcagctgcggc
caagatgcggaggaaggaccggagagccacctgctcggcaaccaccacgtgcagcctggc
cagaatggagccaagcttccgggttctccacccaactccaacatcaacaatggcaacaac
agccacctgcccgcggcaggcaactgcaaggggggcttgttcccatctgacacggggcag
cacgcgtccctgcaccaccccaacggcacagtcaggagggcctcggctaaaagccgaaat
cgctactatgaaacgtatgtacgctcgtccacgggggacggacgtgtccccgtcatccag
agggaggcggccgtcgacgatgaggacggctacgcggcggagcccagcttctacagcgac
gacgaggagggcagccccctcaccatggacaggcaatactacaaggagtcgagcggacgc
taccggggagctgaccggcagtacgacgagccgctgacccacacgtcctcctgccgctcc
cacgacaaggaactgagcaggaatccccagcgcaggagactgctgcccccaactccgcca
gggaggagaccctcgtttaacatcgactgcctacggagacagtcgagcctcgagtcggac
ctacccatgtccttgaactacgcacccaattcgtcccttcctctgcggctcgcccaacaa
caggtcctcgccgtggccggcctggatggcttcgccgctgaacaccggcgccactcatcg
gcgcatgcgacctcgtcatgggccacgccacccgccacgccatcctccacgccgggccgc
ggctcctcgtaccacaatagccgcacgatgccgccttcgctggcgccaccgtcgttgccg
tcccccacgtcctcgctgccgcggccgccctactacacgcccgccatcctcatcgagcgc
gccgactcgcgaacatccgctacctccgccctcctccaccaccaccaccagcatcaccac
ggcggcaagctcaacggcagcctgccatcagtggaccgcagctcgtggtacacggacggg
cccgacgcaccgtaccgcagcttcgttccgggagggctcgccgtgccgtctgcccgactg
cgggatcgatacgccgagacgcggggcagcgccgacagcctcgtggaagccgtgctgata
tcggaggggctcggccgcttcgcccgcgacccacgcttcgtggcggtcaccaagcacgag
ctggccgacgcctgcgagatgacgatggacgagatggagagcgccgccagccacctcctc
aacggcagccccaccacgggcggcgggggcggcctgcacgcccgctcggcgccggtgacc
ccgcgccgcgactacgacccccaggacttcggctcgggcgccagcgacgacgagccggtg
cacgtcaagtacgacgaggacctgtcggacgagatgatctgcgtcaccactttgtag
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integrated database retrieval system
