Petromyzon marinus (sea lamprey): 116949396
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Entry
116949396 CDS
T09614
Symbol
EEFSEC
Name
(RefSeq) selenocysteine-specific elongation factor isoform X1
KO
K03833
selenocysteine-specific elongation factor
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pmrn03012
]
116949396 (EEFSEC)
Translation factors [BR:
pmrn03012
]
Eukaryotic type
Elongation factors
116949396 (EEFSEC)
Prokaryotic type
116949396 (EEFSEC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eEFSec_4th
euk_SelB_III
GTP_EFTU
GTP_EFTU_D2
MMR_HSR1
cobW
SRPRB
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
116949396
NCBI-ProteinID:
XP_032822567
UniProt:
A0AAJ7TR78
LinkDB
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Position
36:8306270..8368947
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AA seq
589 aa
AA seq
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MARKAFNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSAFGAPL
PAHLRDDPRAGGYEALQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAEC
LLIGEITCPRMMVVLNKTDMLPEAKRATLIEKMTKKMHKTLENTRFKGAPIISVAAKPGG
PDAPEAQEAEGIAGLIELLLSQTYLPQRDPAGPLLMAVDHCFCIRGQGTVMTGTVLSGSV
SVNDTVEIPALKVTKKVKSMQMFRKPVTSAAQGDRVGLCVTQFDPKLLERGLVCSPGSLL
SLRSGIASVRRVPYFRGAVSTRAKFHVTIGHETVLARVSFFGAGGGAGDDGGGDDAAFDF
SRDYAYQDQFLAEQPKDRAEQADERTTSAANPVPQHQWALLEFERPVTCPRPCKVIASRL
DADIHANSCRLAFHGTLLEGFEEKGYSDASLAHLRVYKTKSKEGTVERASGEYEVIGRSL
FKKETNMQLFVGMKVTLSTGEQGLIEGGFGQSGKFKIRVPAGLKPETMKLLSAGAAGGSK
RKGRGGGGGSNKEDATPVEEAKVEGAQPVRITLAFRKYVFDPNKKMVQA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaaggcgttcaacttcaacgtgggagtcctgggccacgtggacagcggcaag
acgtcgctggcgcgggccctgagcagcacggcctccacggccgccttcgacaagaacccg
cagagccgtgagcgcggcatcacactggacttgggattctcggccttcggagcgccgctg
cccgctcacctgcgcgatgaccccagggcagggggctacgaggctctgcaggtgaccctg
gtcgactgcccagggcacgcgtcgctcatcaggaccatcataggaggagcacagattatc
gacctgatgatgctggttatcgacgtgaccaagggcatgcagacgcagtcggccgagtgt
ctgcttattggagagatcacctgcccccgcatgatggtcgtgctcaacaagacggacatg
ctgcccgaagccaagcgcgccacgctcatcgagaagatgaccaagaagatgcacaagacc
ctggagaacaccaggtttaaaggggctcctataatctcggtggcagcaaaaccgggcggc
ccggatgcacccgaggcccaggaggcagagggcatcgcaggactcattgagttgcttctg
tctcagacgtacttgccccagagggaccctgcaggaccactgctcatggccgtggaccac
tgcttttgcatcagaggccagggcacggtgatgactggcaccgtgctctcaggcagcgtg
tctgtcaatgacactgtggagatccctgctctcaaggttaccaagaaggtgaaatcgatg
cagatgttccgcaagccggtgacgtcggcggcgcagggcgaccgcgtcggtctctgcgtg
acgcagttcgaccccaaactgctggagcgtgggctcgtgtgctcgccgggctcgctgctg
tcgctgcgctccggcatcgcctccgtgcgccgcgtgccctatttccgtggcgccgtgagc
acgcgcgccaagtttcacgtcaccatcggccacgagactgtgctcgcccgggtctccttc
ttcggagctggcggtggggccggcgacgacggcggcggtgacgacgccgctttcgacttt
tcgcgagactacgcgtaccaggaccagttcctggcggagcagcccaaggaccgcgccgag
caggctgatgagcggaccacatccgccgccaatcctgtaccgcagcaccaatgggctctg
ctggagtttgagcgcccggtcacctgtccacggccctgcaaggtgatcgcgtcccgcctg
gacgcagacatccacgccaacagctgccgcctggcgttccacggcacgctgctggagggc
ttcgaggagaagggctacagcgacgccagcctggcgcacctccgcgtctacaagaccaag
agcaaggagggtaccgtggagagggcgagcggggagtatgaagtgatcggacgttcgctc
ttcaagaaggagaccaacatgcagcttttcgtgggcatgaaagtcacgctgtccaccggc
gaacagggcctcatcgagggcggctttgggcagagtggcaagttcaagatccgcgtgccg
gccggcctgaagcccgagacgatgaagctgctctcagctggcgctgccggcggctccaag
cggaaggggagaggaggcggcggtggctcgaacaaggaagacgcgacccccgtggaggag
gccaaggtggagggcgcgcagcccgtgcggatcaccttggccttccggaaatacgtgttc
gaccccaacaagaagatggtgcaggcctag
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