Petromyzon marinus (sea lamprey): 116949522
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Entry
116949522 CDS
T09614
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116949522 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116949522 (CNOT3)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116949522 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116949522 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF6165
Motif
Other DBs
NCBI-GeneID:
116949522
NCBI-ProteinID:
XP_032822804
UniProt:
A0AAJ7TRI3
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Position
37:complement(6622297..6654121)
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AA seq
877 aa
AA seq
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MADKRKLQAEIDRCLKKVSEGVEIFEDIWQKHDRLFQVHNAANINQKEKYEADLKKEIKK
LQRLRDQIKTWLTSNDIKDKRQLIENRKLIELQMERFKVVERETKTKAYSKEGLGSAVKV
DPAQKEREEISQWLTNTIDNLNMQVDQFESEVESLSIVSKKKKSEKEKADRVEVLKRQLE
RHRWHVGKLETLLRMLDNQTVEVDAIRKIRDDVEYYADSSQDPDFEENEFIYDDINMDEI
GLAAVLATSPVSNSLNDDEVFNQSSSTPTSTTSCSPVPIPNENHENHHQDKRRSKSTDSE
SMQSPAKALLTKAHHGTVGTPVSPIIQNTSGRTLSKSESSAGGSGGSGGGSGSNSKAGTS
KPSATSLASSQAPSGPAYSAAVSGVTPTTGASGGASGLAAGSSAGSAGVAPPALSSSSTS
GTTVGASSVWSPSANGPGGGAGSSASVWNLSGHGVVGGSGVWNPTSTSTGVWALNGVAGG
ATSAGGGSSSSSTSSLAGGLGGSGGGGGAVGSAPLSLAPGAGNAAQPRPGSANQAASAAA
TAAAAAAASRQLNGANSYSSVVAESREDSPQVVNSDSPSSQPNIAPSPPLLKETPDAIAA
PPPASPGPSAAAASVAQASVPLTLASPDLAEAKASSEMRNGPQSYGASPSPDHITKDSLS
SLKSMAEKAAAEAGLEGQMQSLHLTDRDLFVGPGRPPSPVTKEAHVQPLLGVCPLGATPL
GKDNVYQQGMLEASWRHMPHPSDAERLRHYLPRNPCPTPSYHHRVPPTHSDTLEFYQRLS
TETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQPCGLNV
HACQSGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcagataagcgaaagctacaagcggagattgatcgctgcctcaagaaagtgagcgaa
ggcgtcgagatttttgaggacatctggcaaaagcacgatcgccttttccaggtgcataat
gcagccaacatcaaccagaaggaaaagtatgaggctgatcttaaaaaggaaatcaagaag
cttcagaggcttcgagaccagatcaaaacatggctcacttccaacgacatcaaggacaaa
aggcagctaatagaaaaccgcaagctgatagagctgcaaatggagagattcaaggtggtt
gagcgcgagacgaaaaccaaggcctactccaaggaggggctgggctccgcggtcaaggtc
gacccggcgcagaaggagcgcgaggagatcagccagtggctcacgaacaccatcgacaac
ctaaacatgcaggtggaccaatttgagagcgaagtggagtcgttgtcgatagtgtccaag
aagaagaagagtgaaaaggagaaggccgaccgcgtggaggttctcaagcggcagctggag
cggcaccgctggcacgtgggcaagctagagacgctgctccgcatgctggacaaccagacg
gtggaggtggacgccatccgcaagatccgcgacgacgtcgagtactacgcggactcgtcg
caggacccggacttcgaggagaacgagttcatctacgacgacatcaacatggacgaaatt
ggcctggctgcggttctggccacctctccagtcagcaacagcctcaacgacgacgaagtt
tttaaccaatcaagcagcactccgacctccaccacgtcatgttcgcccgtgcccatcccg
aacgagaaccacgaaaaccaccaccaggacaagaggaggagcaagtcgacggacagcgag
tcaatgcagtctcctgcgaaggcgctgttaacgaaagcgcaccacgggaccgtagggacg
ccagtctcgcccatcatccagaatacatcggggcggactctcagcaaatcggagagcagc
gcgggtggcagcggcggaagtggcggtggtagcggcagtaacagcaaagcaggcaccagc
aaaccatccgcgacgagtctagcgtcatcgcaggcgccgtcaggtcccgcgtactccgcc
gccgtttcgggcgtgacgccgacaaccggcgcgagcgggggtgcgagcggcctggccgcg
gggtcgtccgcggggtcggcaggggtggcgccgccggcgctgtcttcgtcgtcgacgtcc
ggcacgacggtcggcgccagctcggtgtggagccccagcgccaacggccccggcggcggc
gccggcagcagcgccagcgtgtggaatttgtcggggcacggcgtggtgggcggcagcggc
gtttggaacccgaccagcacgagcaccggcgtgtgggcgctgaacggcgtcgcgggtggc
gcgacctcggctggcggcggcagcagcagcagcagcaccagcagcttagcgggcggcctg
gggggcagcggcggcggcggcggcgcggtgggcagcgcgccgttgtcgctggcgccggga
gcaggcaacgcggctcaaccgaggccgggctcggcgaaccaggcggcgtccgcggcagca
actgcagcggccgcggcagcggcgagcaggcagctcaacggtgccaacagctacagctcc
gtggtggcagagtcccgggaagactcgccgcaggtcgtcaactcggactcgccgagcagc
cagcccaacatcgccccctcgcctcccctcttaaaggagacgccggacgccatcgcggct
ccccctcccgcgagccccgggccgtcggcagcggcggcgtcggtggcgcaggccagcgtc
ccgttgaccttggcgagccccgacctggcggaagccaaggcgagctcggagatgcggaac
gggccccagagttacggggcaagcccctcacccgaccatatcaccaaggactcgctgagc
tcactgaagagcatggcggagaaggctgcagcggaggccggactcgaggggcaaatgcag
tcgctccacctcacggacagagacctgtttgtgggcccgggccgccctcccagccccgtc
acaaaagaggcccacgtgcagccgttgctgggcgtgtgcccgctgggtgccactccgctc
ggcaaggataacgtgtaccagcagggcatgctggaggcctcttggaggcacatgccacat
ccgtccgacgccgagaggctcaggcactaccttccccggaacccgtgcccgaccccatcg
taccaccaccgcgtgccacccacccactcggacacgctcgagttttaccagcgactttcc
acggagacactcttcttcatcttctactacctggagggcaccaaggcgcagtaccttgcg
gccaaggccctgaagaagcagtcatggaggttccacaccaagtacatgatgtggttccag
cggcacgaggagcccaagaccatcacggacgagtacgagcagccgtgcggtttgaacgtt
cacgcgtgccaatcgggaacatatatctactttgactacgagaagtggggccagcgcaag
aaggaagggtttacattcgagtaccggtacctggaggacagggacctgcaatga
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