Petromyzon marinus (sea lamprey): 116949652
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Entry
116949652 CDS
T09614
Name
(RefSeq) lethal(2) giant larvae protein homolog 1-like isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116949652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116949652
Membrane trafficking [BR:
pmrn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116949652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Lgl_C
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
116949652
NCBI-ProteinID:
XP_032823089
UniProt:
A0AAJ7TS69
LinkDB
All DBs
Position
37:3869556..3939326
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AA seq
1031 aa
AA seq
DB search
MMRLKLKRPGHDPHREKLKQELFAFNKTVEHGFPHQPSALAYDPDLRLMAIGTKSGAVKI
YGAPGVEFTGLHRDIAIVTQLHFLPGQARVVSLLDDGSLHLWEIVEKDGYSTLTEVQAFT
IPSRPGSEQHPNAPPSLARVTVLSASVAGDRLYVGTEGGVVSQLELPAMRLLDDLTLTQE
DLLHGVPDEYRGGKALGPIEAVQEHPRDPNRLLVGFSRGLMLLWDQATRRMLRCFPTAQQ
LESVTWQRNGTQFVSSHNDGSYRVWHTGSSSAEEEDGEGGHKIPYGPYPCKAINKIQWLL
TRGDPYIVLSGGMPRASYGDRHSVTVIHGTRHVAFDFTSRVIDFFTVCNEAPDSEYDAPQ
ALIVLVEEELVAIDLRSESWAPMPPPYLASLHSSAITCSHHVSAVPLKIWERIARCGRKQ
EDEKNKSHAEWPVNGGINRNTEPALRDLLLTGHEDGSVRFWDASGVALKQLYKLGTANVF
LTEADHAAEGEDEEWPPFRKVGCFDPYSDDPRLGIQKISLCKFSGQMALAGSAGQVLVME
LNDDEVEHEVDVYTVDLLEENETFRWKGHERLTQRAGRIRFPAGFQPQLLVQCSPPASVT
SLALHPEWRLVAFGTSHGLALFDLQQRRAVMSKCTLHPNDALALEGPLSRVKSLKKSLRQ
SFRRIRKSRTSGRKRPPRDGANKCLSTQGRLDKVQEAEGEVELAPVQRRIEARSADDSLS
GVVKCIYFADTFLRDGSHHGPSLWAGTNAGIIFAYTIDVPSSERRSETPVEARLAKEIQL
MHRAPVVGLTVLDGKGSPLPEPLEVLHDLAKTPEMGSSHSLLIVSEEQFKVFALPRVGAK
NKFKLTATEGSRVRKVALATFASAAPAGEDYSESCLVCLTNLGEVHAYSVPALRLQARHS
CMRREDVGGIASCVFTKSGQGFYLISPSEFERFSLSAKSITEPLCAVQPKARDVPTRHSA
KDRQRNSTRSNGSSSSVGEGKKKGKIMENALLTDSTVLEEIQETLSSSNAAAAAAAAEAK
AGGRVGAKPAP
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgactgaagctcaagcggccgggtcacgacccccatcgtgagaagctgaagcag
gagctctttgccttcaacaagaccgtggagcatggcttcccgcatcagcccagcgcgctg
gcctacgaccccgacctgcggctcatggccatcggtaccaagtccggcgccgtcaaaatc
tacggtgctccgggagtggagttcaccggactgcaccgcgacatcgccatcgtcacgcag
ctccacttcctgccaggacaggcgcgcgtggtctcgctgctggacgacggctcgttgcac
ctctgggagatcgtggagaaggacggatactcgacgctcaccgaagtccaggctttcacc
atcccgagccggccagggtctgaacaacatccaaacgctccgcccagcctggcgcgcgtc
acggtgctgtcggcgagcgtggccggcgaccgcctctacgtgggcaccgagggcggcgtc
gtgagccagctcgagctgcccgccatgcgcctgctcgacgacctgacgctcacgcaggag
gacctgctgcacggagtaccggacgagtaccgcggcggcaaggcgctgggccccatcgag
gcggtgcaggagcacccgcgggaccccaaccgcctcctcgtgggcttcagccgcggcctc
atgctgctgtgggaccaggcgacgcgccgcatgctccgctgcttccccacggcgcagcag
ctggagagcgtgacctggcagaggaacggaacgcagttcgtgagctcgcacaacgacggc
agctaccgcgtctggcacacaggcagcagcagcgcggaggaggaggacggcgaggggggg
cacaagatcccctacggaccctacccctgcaaagccatcaacaagatccagtggctgcta
acgagaggggatccgtacatcgtgctgagcggcggaatgccacgcgccagctacggcgac
cgccacagcgtcaccgtgatccacggcaccaggcacgtcgccttcgacttcacgtcccgc
gtcatcgacttcttcaccgtctgtaacgaggctcccgacagcgagtacgacgcgccgcag
gccctcatcgtgctggtggaggaggagctggtggccatcgacctgcgctcggaatcctgg
gccccgatgccgccaccctacctggcgtcgctgcactcgtccgccatcacctgctcgcac
cacgtctccgccgtgccgctcaagatctgggagcgcatcgcgcgctgcggccgcaagcag
gaggacgagaagaacaagtcgcacgccgagtggcccgtcaacggaggcatcaacaggaac
acggagcccgcgctgagagacctgctgctcactggacacgaggacggctcggtgcggttc
tgggacgcgtcgggggtggcgctgaagcagctctacaagctgggcacggccaacgtgttc
ctcaccgaggccgaccacgccgcggagggcgaggacgaggagtggccgcccttccggaag
gtgggctgcttcgacccctatagcgatgacccacggcttggcattcagaagatctccctg
tgcaagttcagtgggcagatggcattggctggctcggctggacaggtgctggtgatggag
ctgaacgacgacgaggtggagcacgaggtggacgtttacacggtggacctgctcgaggag
aacgagacgttccgctggaagggacacgagcggctgacgcagcgcgccggccgcatccgc
ttccccgccggcttccagccgcagctgctcgtgcagtgctcgcccccggcgtccgtcacg
tcgctggcgctgcaccccgagtggcgcctcgtggcgttcggcaccagccacgggctggcg
ctgttcgacctccagcagcgccgggccgttatgtccaagtgcacgctgcaccccaacgac
gcgctggcgctcgagggccccctgtcgcgcgtcaagtcgctcaagaagtccctgcgccag
tcgttccgcaggatccgcaagagccgcacgtcggggcgcaagcggccgcccagggacggc
gccaacaagtgtctcagtactcagggccgcctggataaagtgcaggaggcagagggcgag
gtcgagttggcgcctgtgcagcgccgcatcgaggctcgctccgccgacgactccctctcc
ggcgtcgtcaagtgcatttacttcgccgacacgttcctgcgcgacggatcacaccacgga
cccagcctgtgggccggcaccaacgctggcatcatcttcgcctacaccatcgacgtgccg
tcgtccgagcgccggtcggagactccggtggaagctcggctagccaaggagatccagctg
atgcaccgtgcccccgtggtgggcctcaccgtgctggacgggaagggcagccccctgccc
gagccgctggaggtgctgcacgacctggccaagacgcccgagatgggctcaagccactcg
ctgctgatcgtctccgaggagcagttcaaggtgtttgcactgccacgcgtcggcgccaag
aacaagttcaagctgacggcgacggaggggtcgcgcgtgcgcaaggtggcgctggccacg
ttcgccagcgcggcgccggcgggggaggactacagcgagagctgcctcgtgtgcctcacc
aacctgggcgaggtgcacgcctacagcgtgcccgcactgcgcctgcaggcgcgccacagc
tgcatgcgccgggaggacgtgggcggcatcgcctcctgcgtcttcaccaagtcgggacag
ggcttctatctgatctccccttcggagtttgagcgcttctccctctccgccaagagcatc
acggagccgctgtgcgccgtgcagcccaaggctcgtgacgtccccaccaggcattcggcc
aaggacaggcagaggaacagcacgaggagcaacgggagcagctcgtctgtcggagaaggc
aagaaaaagggaaagatcatggagaacgccctgttgaccgactcgaccgtgctggaggag
atccaggagactctgagctcgtccaacgcggcagcggcggcggctgctgcggaggccaag
gccggtggtcgcgtgggagccaagccggcgccctga
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integrated database retrieval system
