Petromyzon marinus (sea lamprey): 116950089 Help Entry 116950089         CDS       T09614                                  Symbol BRIP1 Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn03440   Homologous recombination pmrn03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     116950089 (BRIP1)    03460 Fanconi anemia pathway     116950089 (BRIP1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pmrn03400]     116950089 (BRIP1) Enzymes [BR:pmrn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      116950089 (BRIP1) DNA repair and recombination proteins [BR:pmrn03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      116950089 (BRIP1)    FA (Fanconi anemia) pathway     Downstream FA components      116950089 (BRIP1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 DEAD ResIII Motif Other DBs NCBI-GeneID:  116950089 NCBI-ProteinID:  XP_032823417 UniProt:  A0AAJ7X715 LinkDB All DBs Position 38:192583..227543 Genome browser AA seq 1215 aa AA seqDB search MISPEGSVPKARWDSQAKPQAVAMAANVYTIGGTRVEFPCVPYPSQVSLMNAIMSGLNGK EHCLLESPTGSGKSLALLCSTLAWQKHQYEKLANGDSEKAPGEDKSCKGSAPPQTPAPCG GGPCDCSCHSAPGAQAGAAPSAAPSAAPSAAEAEPGSRSPYFGTSCRAREAALPGNGGSP VSSTLTPPVTPAVGSPLASPYFLSAAPGMSRPGKRGSPADGGDKGDDDDFQVEKRRNRTP HGKALVMKRGIPKGVHYEDDSGGVSDDGAGGAGDKAGGVGRPRPLVTLKQNGQIPAWSPV GNAPCGAACCGCGSPGAPAGAPGSSGRCGGPEGGGVVRRPTRPPKIFFGTRTHRQITQVA RELRRTAYAGVRMTVLSSREHTCVHPVVAALPHGRNEACRELLDNKDGATCLFFRNVYKL GCQAALPSLGLASAWDVEDLVRAGRRVGACPYFSARELMEEADIVFCPYNYLIDPQIRQS MEISVRDQVVVLDEAHNMEDAAREAASASVPQGALRRARDEAGSLAAAGVRPDEHTRLQA VCISLDRWMTQSTHLLKHHDFEMDCLKLSGREMLEVLHAWGVTAHTFPELKRSLARVLEK EETVAGRGRDGGRAVSVAMPVVSAPSQVLLAALFLVLDFMFRDGSRFVEDYRVVLMRTLA WGAPDPDVPDAAGFIARPRPGSRARHKRQLLTVHFWCQNPAVAFSDLSAHARTIILTSGT LSPMASFSSELGVSFTIQREATHVINPSQVWVGTVGLGPSGRELCATYCHTETFAFQDEL GELLLSVCRTVPRGVLCFLPSYKMLQKVSERWQSTGLWAGLEQRKLVMSEPQRGERAEFD RLLEEYYAAVHTEGQRDGALLLAVCRGKVSEGLDFADDNARVVLTVGIPYPNTRGLQVKL KRDYNDLHVRSRGLLSGSRWYEVQAFRALNQALGRCIRHRHDWGALLLVDARFGKNPAKY TEGLSKWLRQQVRHYADFASGLRSLSAFTEACRATLSPADPAGPVAAGPSPGQPAAAIEP AAPPPGHGAAFDRGTAGLGRAGVAHDAGGGRATPARDPPPATPAPALDIAGGRRQRGRQR HWRGREARHRGFASIARFLSPPGGPGGAGVGAERREATPAPWPPGSRHGLPVEGGDAVAA ETGGGPRGHRRHRHYRRRYRRHYRRPRRVRRPRRRRRRRARPCRYRRRHRGAAVPGRRRR RRRRRRPSLLHPGAV NT seq 3648 nt NT seq  +upstreamnt  +downstreamnt atgatcagcccggagggcagcgtgcccaaagcacggtgggactcgcaagcgaagccccag gccgtggcgatggcagcgaatgtctacacgatcggcggcaccagggtggagttcccgtgc gtgccgtacccttcgcaagtgtcgctcatgaacgccatcatgagtggcctcaacggcaag gagcactgcctgctggagagcccaaccggcagcggaaagagcctggctctgctctgctcc acgctggcctggcagaagcaccagtacgagaaactggcgaacggagactcggagaaggct cccggagaggacaagagctgcaaggggtccgcgcccccccaaacccccgccccgtgcggt ggggggccctgcgactgctcctgccactcggcgcccggcgcccaggcgggcgctgccccc tccgctgccccctccgctgccccctccgctgccgaggccgagcccgggagccgctccccg tacttcggcacgagctgccgtgcgcgcgaggccgccctcccgggcaacggcggctccccc gtctcctcgactctgaccccccccgtgaccccggcggtgggctcccccctcgcgtcgccg tacttcctgtcagcggccccggggatgagtcgccctggcaagcgggggtctcccgcggac ggcggtgacaaaggggatgacgatgatttccaggtggagaaacggcggaacaggaccccc cacggcaaggcgctggtgatgaaaagaggcattcccaagggcgtgcattacgaggacgac agtggtggcgttagcgatgatggcgctggtggtgctggtgacaaggcaggcggtgttggt cgcccgaggcctctcgtcaccctgaaacagaacggtcaaatccccgcgtggagccccgtc ggcaacgccccgtgcggcgccgcctgctgcggctgcggctcgccgggagcgccggcgggg gccccggggtcgagcggccgctgcggcggcccggagggcggcggggtcgtgcggcgaccg acgcggccgcccaagatcttcttcggcacacgcacgcaccggcagatcacgcaggtggcg cgcgagctgcggcgcacggcgtacgcgggcgtgcgcatgacggtgctgtcgagccgcgag cacacgtgcgtgcaccccgtcgtggcggccttgccgcacggacgcaatgaggcctgcagg gagctgctggacaacaaggacggtgccacgtgcttgttcttccgcaacgtctacaagctg ggatgccaggcggcgctgccgtcgctggggctggcgtccgcgtgggacgtggaggacctg gtgagggctggccggcgcgtcggggcctgcccgtacttctccgctcgcgagctcatggag gaggccgacatcgtcttctgcccctacaactacctcatcgacccgcagatacggcagagc atggagattagcgtgcgggaccaggtggtggtgctggacgaggctcacaacatggaggac gccgcgcgcgaggccgccagcgccagcgtgccgcagggtgcacttcgccgtgcccgcgac gaggccggctccctcgccgccgccggggtgcggcctgacgagcacacgcggctccaggcc gtgtgcatcagcctggaccggtggatgacgcagagcactcacctgttgaaacaccacgac tttgagatggactgccttaagctgagcggccgcgagatgctggaggtgctgcacgcctgg ggcgtcaccgctcacaccttccccgagctcaagcgtagcctggcgcgcgtgctggagaag gaggagactgtggcgggcagagggcgtgacgggggtcgggcggtgagcgtcgccatgccg gtcgtctccgcaccctcgcaggttctgcttgcagcgctcttcctcgtcctcgacttcatg ttccgtgatggctccaggttcgtggaggattaccgcgtggtgctgatgcgtacgctggca tggggcgctccggatccggacgtccccgacgccgcggggttcatcgcgcggcctcgcccc ggctcgcgagcccggcacaagcggcagctgctcacggtgcacttttggtgccagaaccca gccgtggctttctcggacctgagcgcgcacgcccgcaccatcatcctcacctcgggcacg ctgagccccatggcgtcgttctcctccgagctgggagtctccttcacgatccagcgcgag gccacgcacgtcatcaacccctcgcaggtgtgggtgggcacggtagggctgggccccagc gggagggagctgtgcgccacgtactgccacaccgagacgttcgccttccaggacgagctg ggggagctgctgctgagcgtgtgccgcacggtgccacgaggggtgctctgcttcctgccc tcgtacaagatgctgcagaaggtgagcgagcgctggcagagcacggggctgtgggcggga ctggagcagcgcaagctggtgatgagcgagccccagcgcggggagcgggccgagttcgac cgcctcctggaggagtactatgcggcggtgcacacggagggccagcgcgacggcgcgctg ctgttggccgtgtgccggggcaaggtgagcgaggggctggactttgccgacgacaatgcc cgcgtggtgctcaccgtgggcatcccctaccccaacacgcgcggcctgcaggtgaagctg aaacgcgactacaacgacctgcacgtgcgctcgcgcggcctgctgtccgggagccgctgg tacgaggtgcaggccttccgagccctcaaccaggccctgggccgctgcatccgccaccgc cacgactggggggccctgctgctggtggacgctcgcttcggcaagaaccccgccaagtac accgagggtctctcgaagtggttgcggcagcaagtgcggcactacgccgacttcgccagc ggcctccgctccctctcggccttcacggaggcctgccgggccaccctgagccccgccgat cccgccggccccgtcgcggccgggccctctcccggccaacccgcggccgcgatagagccg gccgctccccctcccggccacggcgccgcgttcgaccgcggcacggccggacttggcagg gccggcgtcgcgcacgacgccggcggcggccgagcgacccccgcccgcgacccccctccg gccacgccggcgcccgcgttggacatcgccggcgggagacggcagcgggggcggcagcgg cattggcggggacgggaggcgcgacaccgcggcttcgcgtcgattgcccgcttcctgtcg cctcccggcggccccggtggagccggcgtcggtgccgaacggcgcgaggcgacgccggcg ccgtggcccccgggctcgcggcacggcctcccggtggaggggggcgacgcggtcgccgcc gaaaccggcggcggaccgcgtggccaccgacgacaccgccactaccgccgccggtatcgc cgccactatcgccgcccccgccgggttcgccgcccccgccgccgccgccggcgccgcgct cgtccctgccgttaccgccgtcggcaccgcggcgccgccgtgccgggacgacgccgacga cgccgacgacgccgacgaccatcgctgctacaccccggagctgtttga

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