Petromyzon marinus (sea lamprey): 116950107
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Entry
116950107 CDS
T09614
Symbol
SMYD4
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116950107 (SMYD4)
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
116950107 (SMYD4)
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Motif
Pfam:
SET
zf-MYND
TPR_10
TPR_12
TPR_14
TPR_2
TPR_4
Motif
Other DBs
NCBI-GeneID:
116950107
NCBI-ProteinID:
XP_032823453
UniProt:
A0AAJ7TSR7
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Position
38:complement(1271082..1293955)
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AA seq
916 aa
AA seq
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MASPPLLLPRVLSAALEARGSERVDEKGGSRERIDAGRDEREPGGRGSPGDESGERARDE
RERGDPQPSLSKLVRRCWSQWSEQDEALLRRTCAPLAAAKDPAGALRHRQEGNRFFQQKQ
NGRAAACYSRSICLATPGSEEQALAFANRSAALFHMQHHQACLDDIDRALANGYPARLTH
KLLSRRADALAALEHARQNPGDNPTAAVAAMGNPDVSAAGGCGRDETLAENGGRAGERVS
VELRWSERSGRHLVAARDLHPGETLLVEPAFASAVAPDADADRERALSPEERCCHHCLRE
AEPVLPVPCQRCSYARFCGEPCRDAAVRSRHHGSVECALASRGLLQGLGPFVQASLRTLL
IAGPRGVVAAVSGDASGGDEEIARTCADFLRDAPSGAGSDAEKAGTPGVDKTPTVSAAAS
AVKIAGCGEDAVYRSDYRAVYHLVTHADTRDTAHILPLAWAAAAVCRHLHELGFSFLSGE
PGGTAPSPESGRSGAGREDEGATGAGGHVVAPAELQGELLLVGTLLLRHLLQLWCNAYAV
TTLSSGTAFPAPAAAVESSEHRRVAVALFPVASLLNHACRPNVSLAFRGAVLTVRAAAPI
LAGEQLLHCYGPQAERMEGAERRRLLRSEYRFECACAACAEEEERGGPHPHDAFLCESCG
SFLKRGGESTPVDEMECSSVRCGRRFSRAPLLASHAELRALVARARSAFEEHGKPEVASK
VLAECLRRGRSLLNPLHATLGEASDCLAQVLAAQGRWEDAARHLRSSLVSVEARFGPGSP
ETAYELFKLTQLLFNGSTRGSLWEADTSRDGPGAEVRTPQRGTDGAGSAARLTRIKWVSP
RSSLARSSKETPTLPAHACLTVPLAVHETHGGARRGRGVGDATDRGATEARQRRVGRKFN
RPRRSNEDGVALVSHR
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccgccgctgctgctgccgcgcgttctgagcgccgcgctcgaggctcggggc
tcggagcgagttgacgagaagggggggagcagggagcggatagacgcggggcgcgacgag
agggagccgggcggtcgggggagcccaggggatgagagtggggagcgagcgagggatgag
agggagcgcggcgatccgcagccgtcgctttcaaagctcgtccgccggtgctggtcgcag
tggagcgagcaggacgaggcgctgctgcgtcgcacgtgcgcgccgctcgccgccgccaag
gaccccgcgggcgccctgcgccaccgccaggaaggaaaccgcttcttccaacagaagcag
aatggccgagctgcggcctgctattccaggagcatctgcctggcgaccccgggcagcgag
gagcaggccctggcattcgccaaccgatcggccgccctctttcacatgcagcatcaccag
gcctgtctggacgacatcgaccgcgcgctggcgaacggctaccccgcgcgcctcacccac
aagctgctgtctcgccgtgcggacgctctagccgcgctggagcatgcgcggcagaaccca
ggcgacaatcccactgccgccgtcgccgccatgggcaatccggacgtctcggccgccggg
ggttgtgggcgtgacgagacgctcgcggagaacggaggacgcgcgggggagcgagtgtct
gtggagttgcgctggagcgagcgctcggggagacatttggtggcggcgcgcgacctccac
cctggggagacgctcctcgtcgagccggcgttcgccagcgccgtcgcccccgacgccgac
gcggatcgcgagagggccctgtccccggaggagcgctgctgccaccactgcctgcgcgag
gccgagccggtgctgccggtgccgtgccagcgctgcagctacgcacggttctgcggggag
ccgtgccgggacgcggcggtgcgtagccgccatcacggcagcgtggagtgcgccctcgcg
agccgtggcctcctgcagggcctgggccccttcgtacaggcgagcctcaggactctgctc
atcgccgggccgcgtggcgtggtggccgccgtgagcggagacgccagcgggggcgacgag
gagatcgcgcggacttgcgccgacttcctgcgcgacgcgcccagtggcgccggcagcgac
gcggagaaagctggaacgccgggtgtggataaaactccgacggtatcggcggcggcgtcc
gcggtgaagatcgccgggtgcggagaggacgcggtttatcgcagcgactaccgagccgtc
taccacctagtgactcacgcggatacgcgcgacaccgcgcacatccttccccttgcctgg
gccgcggctgccgtgtgcaggcacctccacgagctgggtttctcctttctgagcggagag
ccgggcggtacggcgccatcaccggagtcggggcggagcggcgccgggcgagaggatgag
ggggcgacgggggccgggggtcacgtcgtagcgccggccgagctccagggcgagctgctg
ctggtggggacgctgctgctgcgccacctgctgcagctgtggtgcaacgcgtacgccgtg
accacgctgagcagcggcacagctttccccgcgccggcggcggcggtggagagcagcgag
catcggcgcgtggcggtggcgctgttccccgtggcgagcctgctcaaccacgcgtgccgc
cccaacgtgagcctcgcgttccgcggcgccgtcctcaccgtgcgggccgccgcgccgatc
ctcgccggcgagcagctgctccactgctacgggccgcaggcggagcggatggagggggcg
gagcggcggcggctgctgcgctccgagtaccgcttcgagtgcgcgtgtgcggcgtgcgcg
gaggaggaggagagggggggaccgcacccccacgacgcgttcctctgcgagagctgcggc
tccttcctgaagcgcgggggtgagagcacgcccgtggatgagatggagtgctcgtccgtg
cgctgcgggcgccgcttctcgcgtgcgccacttctggcgtcgcacgcggagctgcgagcg
ctggtcgctcgcgctcggagcgcgttcgaggagcacgggaaacccgaggtcgcgtccaag
gtgctggccgagtgcctgcgccgcggccgtagcctgctgaaccctctccacgccaccctg
ggcgaggcctcggactgcctcgcgcaggtgctcgccgcacaagggcggtgggaggatgcg
gctcgtcacctccgcagcagcttggtgtccgtggaggcgcgctttgggcccggcagcccc
gagacggcgtacgagctcttcaagctcacgcagctcctcttcaacggctccaccagaggt
tccctgtgggaggccgacacgtctcgcgatggcccgggcgccgaggtgcgaacgccgcag
cgcgggacggacggtgcagggagcgctgctcggttgacgcgcattaagtgggtctcgccg
cggtcgtcgttggcaagatcgtcgaaggaaactcccacgctccctgcccacgcgtgttta
acggtcccgctggcagttcatgaaacacacggtggagctcggaggggcagaggtgtggga
gacgcgacggaccgaggtgcgaccgaagctcgccagaggcgagtcgggcgaaagttcaat
cgtcctcgccgctcaaacgaggatggcgttgcacttgtctcccatcgctga
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