Petromyzon marinus (sea lamprey): 116950160
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Entry
116950160 CDS
T09614
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116950160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116950160
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116950160
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116950160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_2
WWE_5
zf-ANAPC11
zf-UDP
zf-RING_Vps41
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116950160
NCBI-ProteinID:
XP_032823591
UniProt:
A0AAJ7TV64
LinkDB
All DBs
Position
38:complement(4113816..4143370)
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AA seq
689 aa
AA seq
DB search
MMAAGAAGAVVLPPPPAGSGLVVVWEWLSEQQRWRPYSSRVCRHIETAIGTRGAGGGGGG
STRGGGSVVLGQAEPLLAAYIIDLQSMCQFRQDTGTMRPIRKRYFPVDSAPGRGIVWKWE
QDGGAWTCYEADLCAALQDAYERRRPGLDLTALSGLPYYVDFSNMCQINPRTNFRRRILV
TYEAPYPPASSPPPPLPMHPHPHYHHQPQHHQPQHHQHQQQHHQQQQHQQAGGAALGHMQ
FVAQSLQPGPGAGQGNGSSHSSGPLMTASSSTSPVPTQAAAAASSSSLSSSPGSPVPHAQ
STQAWPLSCGCQQCQGRPPTQKRKASQSGMPVPAAAARPGPPPLSPTSSAAGVGVPMPPG
LGPVVAISRMGPAARGGPMRLAAALPPPGMPSLPGNAMNLPISLQSAFAAGGGLLPMTRA
LPKHLFHPPAVSKDELRPVPGVSGTCRKIKKSKGKKGKKSPEDVVKKYLQMMKNPPDEDC
TICMERLAVPSGYEGMTGCTGVRADGLGQLGRCGHAFHLLCLVAMYSNGNKDGSLQCPTC
KTIYGEKTGTQPPGKMEFHVIPFSLPGQPDCHAIRIIYDIPSSTQGPEHPNPGKKFTARG
FPRHCYLPDSEEGRKVLKLLIVAWERRLIFTVGTSSTTGESDTVVWNEIHHKTEFGSNVT
GHGFPDPNYLQNVQAELAAQGVTEALLLD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcgggggcggcgggggccgtggtgctgccacctccgccggctggctcgggc
ttagtcgtcgtgtgggagtggctgagcgagcagcagcgctggaggccgtacagctcccgc
gtgtgcaggcacatcgagacggctatcgggacccgcggggcaggaggtggtggaggagga
agcacccgtgggggtggcagcgtggtgctcggtcaggctgagcctctcctcgccgcctac
atcatcgatctgcagtccatgtgccagttccgccaggacacaggcaccatgcgcccgatc
cgcaagcgctacttcccggtggactcggcgccaggccgcggcatcgtgtggaagtgggag
caggacggcggcgcgtggacgtgctacgaggcggacctgtgcgccgcgctgcaggacgcc
tacgagcgccggcggccgggcctcgacctgactgcgctctcgggcctcccctactacgtc
gacttctccaacatgtgccagatcaacccgcgcacgaacttccgccgtcgcattctcgtc
acgtacgaggcgccgtacccgcccgcttcaagcccgccgccgcctcttccaatgcatccg
cacccccactaccaccaccagccgcagcaccaccagccgcagcaccaccagcaccagcag
caacatcaccagcagcagcagcatcagcaggcaggcggtgctgcgttgggacacatgcag
ttcgtggcgcagtcgctgcagcccggaccgggtgcgggtcagggaaatggttcgtcgcac
agcagcggaccgctgatgacggcctcctcctctacctcgccggtgccgacgcaggcggcg
gcggcggcgtcgtcgtcgtcattgtcgtcgtcgccgggcagtcccgtgccgcacgcgcag
tcgacccaggcgtggccactgtcgtgcggctgccagcagtgccagggccgccctccgacg
cagaagcgcaaggcgagccagtccggcatgccggtgccggcggcggccgcgcgcccgggg
cccccgccactgtcgccgacgtcgtccgccgccggtgtcggggtaccgatgcctccgggc
ctggggccggtcgtagccatcagcaggatggggccagcggccaggggtggcccaatgagg
ctcgctgctgcgctgccaccaccagggatgccttcacttccaggaaatgcaatgaacctt
ccaatatctctgcagtctgcatttgcagccggcggggggctgctccccatgactcgcgcc
ctccctaagcatctcttccatcctccagccgtgagcaaggacgagctgcgacccgtgccc
ggcgtctccggcacctgccgcaagatcaagaagtccaagggcaagaaaggaaagaaatca
cctgaagatgtggtgaagaaatacctgcaaatgatgaaaaacccaccggacgaggactgc
accatctgcatggagcgcctcgccgtgccatcaggctacgagggcatgacgggctgtacg
ggcgtgcgggccgacggactgggccagctgggccgctgtggccacgcgttccacctcctc
tgcctcgtcgccatgtacagcaacggcaataaggatgggagtctgcagtgcccgacgtgc
aagacgatctacggggagaagacgggaactcagccgcccggcaagatggagttccacgtt
attccgttctcactgcccggccagcccgactgccacgccatccgcatcatttacgacatc
ccgtccagcacccaggggccagagcatccaaacccgggcaagaaattcacggcccgcggc
ttcccccgccactgctacctgccggacagcgaggagggacgcaaggtgctgaagctgctg
attgtggcgtgggagcggcggctcatcttcacggtgggcacgtcgagcaccactggcgag
tcggacaccgtcgtgtggaacgagatccatcacaagacggagttcggctccaacgtgacg
ggccacggattccccgaccccaactacctgcagaacgtgcaggctgagctggccgcacag
ggcgtcaccgaggccttgctactcgactag
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