Petromyzon marinus (sea lamprey): 116950177
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Entry
116950177 CDS
T09614
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116950177 (DDX52)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116950177 (DDX52)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
90S particles
Helicases
116950177 (DDX52)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
INTS15
AAA_19
Cas3-like_C_2
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
116950177
NCBI-ProteinID:
XP_032823622
UniProt:
A0AAJ7TVX7
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All DBs
Position
38:complement(5139876..5153637)
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AA seq
666 aa
AA seq
DB search
MDTASLFARLRGGTRFDFKRFRAEAERFQMVKPTSDCQMSPVEAASALDFFGSKAKQAIH
GGSVKKPPAGRASGTSAPAVPGTAQKRKRGEGLGPSNGKKGKQSGRSGRKVEDAAGSNAD
ECADIDTGLEEEEVEEVVEEDDEEEEEAVEAPADAAICTKKEEPEEELGIQLMSSLGKLP
LKHKVKKKKKPSAEKAERIRRDQINALRNSLKVHVSGTDVPPPLASFEQLRSEYELHPRI
LSNVLEAGYLQPTPVQRQAIPLMMQRREILACAPTGSGKTAAFCIPILHHLQQPRNCGFR
AVIVSPTRELVAQTHRELSRIADGLGFRIHMITKTSVAAKKFGPKSAKRFDILVTTPNRL
VFLIKQEPPVIDLSSVEWLIVDESDKLFEAGSSGSSGFREQLAAIFQACTSPAARHAMFS
ATFAQDVEQWSRLNLDNLVSVGVGTRNTPVETVEQELLFVGAESGKLLAIRNIVKKGLTP
PVLVFVQSIQRARELFNELVYEGINVDVIHADRTKLQRDNIVRSFRAGKIWVLICTELMG
RGMDFKGINLVINYDFPTSAIEYIHRIGRTGRAGKRGKAITFFTEDDRPLLRSTAAVIKK
AGCPIPDYMMGLERMPSKTKRSLVKNPPKRETIRTMPELFLPNAARHKKTIAFQKQGGKN
KVKTSS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggacacggcgtccctgttcgcgcgcctccgcggcggaactcgcttcgacttcaagaga
ttccgcgccgaggcggagagattccagatggtgaagccaaccagcgattgtcagatgtct
cccgtcgaggcagcgagtgcactcgacttcttcggatcgaaagccaagcaggcgatccat
ggcggctcggtgaagaaaccccccgccggccgggctagcggaacctcggcaccagcggtg
ccaggcacggcacaaaaacggaagcgcggtgaaggcttggggccgtcgaatgggaagaag
ggaaagcaaagtgggaggagtgggaggaaagttgaggacgcggccggcagcaatgcggat
gaatgcgcagacattgacacaggccttgaggaggaggaggtagaggaggtggtggaagag
gatgatgaagaggaggaggaagcagtggaggcacccgcagatgcggccatctgcacgaag
aaggaagagcccgaggaggagctggggattcagctgatgtcgtcccttgggaagctcccg
ctaaagcacaaagtgaagaagaagaagaagccctcggctgagaaggcggagagaattcgg
cgcgaccagatcaacgccctgcgcaactcgctcaaggtgcacgtgtccggcacagacgtg
ccgcccccgctcgcgtcgttcgagcagctgcgctccgagtacgagctccacccgcgcatc
ctgagcaacgtgctcgaggcagggtatctgcagcccacgccggtgcagaggcaggccatc
ccgctcatgatgcagcggcgggagatcctggcatgcgcacccacgggctcggggaagacg
gccgcgttctgcatccccatacttcaccacctgcagcagccacgcaactgtggcttccgc
gccgtcatcgtgtccccgacgcgcgagctcgtggcccagacgcaccgtgagctgagcagg
atcgccgacggtctgggtttccgcatccacatgatcaccaagacttccgtcgccgccaag
aagtttggccccaaatccgccaagaggtttgacatactggtgacgacccctaaccggctg
gtgttccttatcaagcaagagcctccggtcatcgacctgagcagcgtggagtggctcatc
gtggacgagtcggacaagctgttcgaggccggatccagcggatccagcggcttccgcgag
cagctcgccgccatcttccaggcgtgcacgtcgcccgccgcgcgccacgccatgttcagc
gccacgttcgcccaggacgtcgagcagtggagccgcctcaacctcgacaacctggtgtcc
gtcggcgtggggactcgcaacacccccgtggagaccgtggagcaggagctgctgtttgta
ggagccgagtcggggaagctgctcgccatccgtaacatcgtcaagaagggcctcacgccg
cccgtgctggtgttcgtgcagtcgatccagcgagccagggagctcttcaacgagctcgtc
tacgagggcatcaacgtggacgttatccacgctgaccgcaccaagctgcagcgcgacaac
atcgtgcggagcttccgtgccgggaagatctgggtgctgatctgcacggagctgatgggc
cggggcatggacttcaagggcatcaacctcgtgatcaactacgactttccgaccagcgcc
atcgagtacatccaccgcatagggcgcaccgggcgtgcggggaagcgaggcaaagccatc
accttcttcaccgaagacgaccgcccgctgctcaggagtacggccgcggtcatcaaaaag
gccgggtgccccattccggactacatgatgggactcgagcgaatgccctcgaagaccaag
aggagcctcgtgaagaacccccccaagagggaaaccatccgcacgatgcccgagctcttc
ctgcccaacgcggcgcggcacaaaaaaacgattgcttttcaaaagcagggcggaaagaac
aaagtgaagaccagcagttga
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