Petromyzon marinus (sea lamprey): 116950239
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Entry
116950239 CDS
T09614
Name
(RefSeq) nuclear receptor corepressor 1-like isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116950239
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116950239
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116950239
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116950239
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
116950239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116950239
NCBI-ProteinID:
XP_032823763
UniProt:
A0AAJ7X8B0
LinkDB
All DBs
Position
38:complement(9453991..9523728)
Genome browser
AA seq
2713 aa
AA seq
DB search
MSGSAFPPSQAGFAAEPGRYPTASLQYGYQATRQPQEYSAADYRVHAQDFGSPQQRRRPS
LLTEYQPSGESGRPPYAGQVGTVQDTDNLDMKRPRLEQPQGQEAAMQRSTLLPPTQPALD
GTATSVVRKEALFTGKVEPVSPPAAPMALTEDADTSPSKLSKEELLQSMDRVDREIAKVE
QQIAKLRKKQQQLEEEAAKSPEPEKPVSPPPMESKHRSIVQIIYDENRKKAEAAHKILEG
LGPKLELPLYNQPSDTVVYHENIKTNQIMRKKLILYFKRRNHARKQREQELCKRYDELME
DWEKKVERIENNPRRRAKEAKTREYYEKQFPEIRKQREQQERFQRSGAAQRSHTHTFTRC
YVTVGQRGSGLPATVARSEHEMAEIIDGLSEQENNEKQMRQLAVIPPMLYDTEQRRVKFI
NRNGLIEDPVKLYRDRQLLNVWSDHEKELFKEKFIQHPKNFALIASYLDRKSVSDCVLFY
YLSKKNINYKNLVRRSNCRRKGKGTNSQADRQWRSGNYSSVDNDRASLALRLCHGFACAG
RLCSMAGAKACDNQTITRPVTEEKDEKEKKEEKKEDREREKEREKEEEKPEKVEEREERE
ESREKEDDSSREKEKEKGDSSGEEGDEKGPSAGKGRRTAGGLSRRKGRITRSMANEAAAA
AAAAAAANTAASTTPEDPPPAPQPPLPEPVIVSTCTTAATATATTTDVATPAGASPIAAI
PTTIATAVTAAATGTATATITATTTLTTISIGITPATATSSTSTPLPAMGANAEPVESSR
WTEEEMEIARKGLVEHGRNWPAIARMVGSKSESQCKNFYFNYKRRHNLDALLQQHKAKGS
RWRARADRELSQCESVASTVSAQDDQDDDDDESGASGDQSEGGDNNSSDTESAPSPMDTT
RLKEEDGVSGGADSKPANAGAVPLSADKEDAAKVEEPEEPMEVDSNAPGAQVKAECKTEE
EEEVERPAKAVAAADVRRPVELLRANEEEGELGELVRRPLGSVTSISSHDSSATCSADEG
EETVPGAVSPKPSLLCPPRAMIMSPPIRPPAMDLQQLKQRAADIPHMMYAAGPPKAQADA
LTMFQQQIKVVAQESALEDPASGHSHDASDAGGLKRESQDPAGASRRDSLDGERHGSTSP
RSLNRSSAGLDRDGRSVAFFYQDASGGAVPSSSPYHAFVRETGRAGELYLQRHPLPGLQP
APHLLDVTRQPVPRPARLGAMPGPPPLIPSGKQAGTAEKPTVIMGGGGSITQGIPAYPSG
AVHARVAFSTDPGKVAMGSILMGTPRPADASKHAAVSVIKQEELSPRGQPEGLHSRQSSD
PSILIAGPSAAPMHEGVVSKASGPPAKLSLDSSVNYRGSISQGIPAEVLYKGTISKLASS
DESAGSDRGKSSHPMSYPSLQKSAGEGSRSPRAPHEMAGSKRTYDMMEGDLQRMHRLAES
NPYEGLYSRAQHREGAGVPDNKERASVLGSIMHGTPRAHVEPEEFHRRESKQIKREDMSP
KGGGYEGVLGKGKPYDGPHTIKETGRSIHELPRADGRKPAETAQQQQQRRTPEVIHAPTR
VLHEGSIAQIAGVHAGSKIQLATAVNYVLGTPVKYEGSLKHDVKSLLGSPSHLAHAGLAQ
HLLMADGARAAERGGGVGGGDASSRQSGDRGAGGGGSGGGRYEEGKPEDLSRLRSTSVVS
AAPGSSVLRGGPHDAGKSQLSPGTYEEQLATMRLPVGYQGSIARSSPALVRSSEGSITTG
KPVSHERKSTPTPRDNAAPKSPGAVQERAGTHSPYDTAMRDIYRAHLPLGFDPANAVYHP
AFLQAVGPYALNPAAQGYLMARPGTVGARQLSPGPAYPGAYQLYHHHPHVFSESAAVMEN
RQTLLNDYITSQQMLRPEVGGRGLSPRDVPVTVSAYPLHPSIINLAQMSHHPMLVPQSGG
TSTPPMDRITYMPGTSPAFSRPYTASPLSPGVDPTGLYAKGSPSPASPRPRENVIQRPSI
VQGTGKTVITSTESLVHSRPGSHGLEVSANAQGGGMQSRSNSEHYKGKEGKAESFSGRRE
EYPSSRSKSQHSGAEPHAAVKSHHPYPDGQAAAAAALSAQHESWRRVELANRQQEHRAEH
RTEHRTEHRPEHRPEIASYHTSVLSTAQSVRPLPSLSYAYSEVGGGKELRTAAHYAEQQQ
QAGQKDVRSQAVAQQQQFSDGSAGKQRGQAMQPMTQYPDVSNSSGKERPQTKPLSRHEQE
LRTHGKTTMTAASFIDAVITRQISTHAVHAAPGDAAQQQQQQQQQQQQQQQQQQQQHRYQ
MGGADGIEIISPPSTPTPPRHEMPRAQRQHMDAALAEGGGGQPWLQEGRPHHPESGRMQH
RVITLADHIHEIITKDYQSVGAPLSQATSQQAQYLFPGSGRLRPGKSPERSGISPANPEV
LIEPISPPQQQQLAGSERSDGAPSLSHRDGDDHGSSALRQGSPHLGMSVPAYFRNLDENS
SAIVKTKKQEIFRKHSSAGSSGEPEMAVQPGTEIFHMPVTTSSGAVSSRSHSFADSVGPM
GLEAIIRKALIGSFEDQSEEASAMSAVAAAGVGVMPGLAGVSPALDGRGQQALGPSPSSS
SAQASSLKVKLPSRPSARKAKSPGPAQSYAERPSSVSSVHSEGDNNRKTPLTHRAWEDRP
SSTGSTPFPFNPLMMRLPSSTPPSALTQAPAAVSQVASPAPPPPPPPPPQRTWEREPAPL
LSAQYETLSDSDD
NT seq
8142 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctcggcttttcctccgtcgcaagctggcttcgccgctgagcccggacgctac
cccaccgcctccctccagtatggataccaagcaacgcggcagccacaggagtacagcgct
gctgattaccgggtgcacgctcaggatttcggctcgccacaacagagacggcggccgtcc
ctcctcaccgagtaccaaccgagcggagagagcggcaggcctccctacgctggccaggtc
ggcactgtgcaggacaccgacaacctcgacatgaagaggcctcggctggagcagccgcaa
ggccaggaggcggccatgcagcgcagcacgctgctgcccccgacgcagcccgcgctcgac
ggaacggccaccagcgtcgtcaggaaggaggcgctgttcaccgggaaggttgagccggtc
tctccgccagcagccccgatggcactcacggaggacgcggacacttccccgtccaagctc
tccaaggaggagctgctgcagagcatggaccgcgtggaccgcgagatcgccaaggtggag
cagcagatcgccaagctgcgcaagaagcagcaacagctggaggaggaggcggcaaagtct
cccgagccggagaagcccgtgtctcctccgcccatggagtcgaagcaccgcagcatcgtg
cagatcatctacgacgagaaccgcaaaaaggcagaagctgctcacaagatccttgagggc
ctgggaccgaagctcgagctgcccctatacaaccaaccgtcggataccgtggtctaccat
gaaaacatcaaaacaaatcagataatgagaaagaagctcatcctgtacttcaagaggagg
aaccacgcacgaaagcagagggagcaggagctgtgcaagagatacgacgagctgatggag
gactgggagaagaaggtggaacgcatcgagaataacccgcggcggcgcgccaaggaggcg
aagacgcgcgagtattacgagaagcagttccccgagatccgcaaacagcgcgagcagcag
gagcgcttccagaggtcaggggcagcgcagcggagccacacacacacgttcacacgctgt
tacgttacggtcggccagaggggttcgggtttgcctgcgacggtagcccggagtgagcac
gagatggccgagattatagacgggctgtcagagcaagagaacaacgagaagcagatgcgc
cagctggcggtgatcccgcccatgctgtacgacacggagcagcggcgcgtcaagttcatc
aaccgcaacggcctcattgaggaccccgtgaagttgtaccgcgaccgtcagctcctcaac
gtgtggtccgaccatgagaaggagctcttcaaagagaagttcattcagcatccgaagaat
tttgccctcatagcctcgtacctggatagaaagagcgtctcggactgcgtacttttctac
tacctgtctaagaagaacatcaactacaagaaccttgtgcggagaagcaactgtcggcgc
aagggcaagggcacgaattcacaagctgacagacagtggcgctccggaaactactcctcc
gtggacaatgatcgagcatcgctggctctgcgcttgtgccatggctttgcctgtgcaggt
cgactgtgcagcatggcaggagccaaggcctgtgacaaccagacgataacgcgacccgtg
acggaagagaaggatgaaaaagaaaagaaggaagaaaagaaggaagacagggaacgggag
aaggagagggagaaggaggaggaaaagccagagaaggtggaggagcgcgaggagcgcgag
gagagccgagagaaggaagacgactcgtccagggagaaggagaaggaaaagggagactcc
tcgggcgaagaaggcgatgagaagggcccgtcggccggcaagggccgaaggacggcgggc
ggcctgtcgcgtcggaaagggcgcatcacgaggtccatggccaacgaggctgcggcggcc
gcagcggcggcggcggccgccaacacagcagcaagcaccacccccgaggaccccccgccc
gcaccacagccgcccctgccggagcccgtgatcgtctccacctgtaccactgccgctact
gccaccgccaccaccactgacgttgctactcccgccggtgcctcgcccattgccgccatc
ccaactaccatagccaccgccgtcaccgccgcagccaccggcactgctaccgccaccatc
accgccacgaccacccttaccaccatcagcattggcatcacccccgccaccgccacctcc
tccacctccacgccactgcccgcaatgggagccaacgcagagcctgtggagtcgtcacgc
tggaccgaggaagagatggaaattgctaggaaagggttggtggagcacggtaggaactgg
ccagcaattgcccgaatggttggctccaagtcggaatctcagtgcaagaacttttacttc
aactacaagcgacgacacaacctggacgctctgctgcagcagcacaaggccaaggggtcg
cggtggagggcacgggccgatcgcgagctgtcccagtgtgagagcgttgcctccaccgtg
tccgcccaggacgaccaggacgacgacgatgacgagtccggggcgagcggcgaccagagc
gaaggcggagacaataacagctcggacacggagagcgcgccgtcccccatggacaccaca
cggctcaaggaggaggacggcgtttccggcggcgccgactccaagccggccaacgccggg
gccgtgccgctgtctgccgacaaggaggatgcagcgaaggtggaggagccggaggagcca
atggaggtggactccaatgcccctggggcgcaggtgaaagcggagtgcaagacggaggag
gaggaagaggtggagcgtccggcgaaggcggtcgccgctgcagacgtccggcgtcccgtc
gagttactgcgcgccaacgaggaggagggggagctgggggagctggttcgccggccgctg
ggcagcgtcacgtccatctccagccacgattcgagcgccacctgcagtgctgacgagggg
gaggagactgtgccgggcgctgtgtcgcccaagccgagcctcctgtgcccgccacgcgcc
atgataatgtcaccgcccatcaggccgcccgccatggacctgcagcagctgaagcagcga
gcggcggacatccctcatatgatgtacgcggccggcccgccgaaggcacaggcggacgcg
ctcaccatgttccagcagcagatcaaggtggtggcgcaggagtcggcgctggaggacccc
gccagcggccacagccacgacgcatcggacgccggcggcctcaaacgcgagtcgcaggat
ccggcgggggcctcccggcgcgactccctcgacggggagcggcacggcagcaccagcccc
cgttcgctcaaccgcagctccgccggcctcgacagagacggccgctcggtggccttcttc
taccaggacgcgagtggcggagcggtgccctcgtcgtctccgtaccacgcgtttgtccgc
gagacgggcagggccggcgagctctacctgcagaggcaccccctgccaggcttgcagccg
gccccgcacctactggatgtgacccggcagcccgtgccacggccggcgcggcttggcgcc
atgccggggcccccgccactcatcccgtcagggaagcaggccggcaccgccgagaagccc
acggtcatcatgggcggaggaggctccatcacgcagggcatccctgcgtacccgtcgggc
gcggtgcacgcgcgcgtcgccttctccacggacccgggcaaggtggctatgggctccatc
ctcatgggcacgccgcggcccgcggacgcctccaaacacgcggcggtgtcggtcatcaag
caggaggagctgtctccacgcgggcagcccgagggcctgcactcccgccagagctcggac
ccctcaatcctcatagccgggccctcggcggcgcccatgcatgagggcgtcgtttccaaa
gcgtcggggcctccggccaagctgtcgctggactcctccgtgaactaccgtggctccatc
tcgcagggcatccctgcggaggtgctgtacaaaggaaccatctccaagctggcttccagc
gatgagtctgccggctctgaccgcgggaaatcgagccacccaatgtcctacccctctctc
cagaagagcgctggcgagggctcgcggagccccagggccccgcacgagatggcggggagc
aagcgcacatacgacatgatggagggcgacctacagaggatgcaccgcctcgccgagtcc
aacccctacgaaggcctgtacagtcgagcccagcacagggagggcgccggcgtcccggac
aataaggagcgcgcatccgtcctcgggtccatcatgcacggcacgccgcgggcccacgtg
gagccggaggagttccaccggcgcgagagcaagcagatcaagcgcgaggacatgtcgccc
aaagggggcggctacgagggtgtcctcggcaagggcaagccctacgacgggcctcatacc
atcaaggagacgggccgctccatccatgagctcccgcgagccgacggccgtaagccggcc
gagacggcgcagcaacagcagcagcgccgcacccccgaggtgatccacgcgccgacgcgg
gtcctgcacgagggctccatcgcacagattgctggggttcatgctggatcaaaaatccag
cttgccacagctgtaaattatgtgctgggcacgccggtgaaatacgagggcagcctgaag
cacgacgtgaagtcgctgctgggcagcccgagccacctggcccacgccgggctggcgcag
cacctgctcatggcggacggcgctcgcgccgcggagagggggggtggcgtggggggtggc
gacgcgtcctcacggcagtcgggcgacaggggggccggcggtggcggcagcggcggtggc
cgctacgaggagggcaagcccgaggacctgtcgcgcctgcgctccacgtccgtagtgagc
gcagcgccgggttcgtcggtgctgaggggcggcccccatgacgccggaaagtcccagctg
agccccggcacgtacgaggagcagctggccacgatgcgcctgcccgtcggctaccagggc
tccatcgctcgctcgtcgcccgccctcgtccgctcgtctgaagggagcatcacgacgggc
aagcccgtgtctcacgagcgcaaatctacgcccacgccgcgcgacaacgccgcgcccaag
tctccgggcgcggtgcaggagcgtgctggcacgcacagcccctacgacacagcgatgcgc
gacatataccgtgcgcacctcccgctgggctttgaccccgccaacgccgtctaccacccg
gccttcctgcaagcggttgggccttacgctcttaaccccgcagctcagggatacttgatg
gcgcggcctgggacggtgggggcccgacagctgtcaccgggcccggcctacccgggtgcc
taccagctgtaccaccaccacccgcacgtgttctccgagtcggcggccgtcatggagaac
cggcagacactgctcaacgattacatcacctcgcagcaaatgctgcgtcccgaggtgggg
ggccgggggctgtccccccgcgacgtccccgtcaccgtctccgcctaccccctccaccca
agcatcatcaacctcgcccagatgtcgcaccaccccatgctggtgccgcagtccggaggc
accagcacgccgcccatggaccgcatcacctacatgcccggcacctcgcccgcgttcagc
cgcccctacaccgcctcgcccctctcgcccggcgtggacccgacggggctctacgccaaa
gggtctccatcacccgcgtccccgcgcccccgggagaacgtcatccagaggccgagcatc
gtgcagggcacgggcaagacggtgatcacgtccaccgagtcgctcgtccactcacggccc
gggtctcacgggctggaggtttcggccaacgcccagggaggcgggatgcagtcgcgctcc
aactcggagcattacaagggcaaggagggcaaggccgagtcgttctccgggcggagggaa
gagtacccgtcgtcgcgcagcaagtcccagcactcgggtgcagaaccccatgcggccgtc
aagtctcaccacccgtaccccgacgggcaggccgctgctgccgccgccttgtcggcgcaa
cacgaatcctggcgccgggtggagctggcaaacaggcagcaggagcacagagctgaacac
aggacggaacacaggacggagcacaggcccgaacacaggcccgaaatagcgagctaccac
acgtcggtgctgagcacggcgcagtcggtgcgcccgctgccctcgctgtcgtacgcctac
agcgaagtgggtggcgggaaagagctgcgcacggctgcacactacgccgagcagcagcag
caggccggccaaaaggacgtgcgctcgcaggccgtggcgcagcagcagcagttctctgac
ggtagcgctggtaaacagcggggtcaggccatgcagcctatgactcagtaccccgacgtt
agcaacagcagcggcaaggagcgaccacagactaagcccttgtcgcggcacgagcaggag
ctgcgaacccatggtaagactacgatgacggcggcaagcttcattgatgctgtaatcact
cggcagatttccacgcacgctgtgcacgccgcgcctggggacgccgctcagcagcaacag
caacagcagcaacagcagcaacagcagcaacagcagcaacagcagcagcaccgctaccag
atggggggcgcggatggcattgagatcatcagccccccgtcgacgccgacgccgccacgg
cacgagatgcccagggcgcagcgacagcacatggacgcagcgttggcagaaggaggagga
gggcagccgtggctgcaagagggccggccccaccaccccgagtctgggcggatgcagcac
cgagtcattaccttggccgaccacattcacgaaatcataacgaaagattatcaaagcgtc
ggggcgcctctttctcaagccacttcgcagcaagcgcaatacttattccctgggtcgggc
cggctcaggcctggcaagtctccagagaggagtgggatttccccagccaaccccgaggtg
ctcatcgagccaatctcacccccgcagcagcagcagctggcgggctcagagcgctctgac
ggcgcccccagcctgtcccatcgcgacggggacgaccacgggtcgtccgccttgaggcaa
ggctcgccgcacctcggcatgagcgtgccagcttatttccgcaacctggacgagaacagc
tcggccatcgtgaagaccaagaagcaggagatattccgcaagcacagctcggcgggcagc
agcggggagcctgagatggcagtgcagccgggcacggagattttccacatgcccgtgacc
acgtcctcaggagcagtcagctctaggagtcattcctttgcagattctgtggggcccatg
ggcctggaggccatcattaggaaggccctcattggcagctttgaggatcagagcgaggag
gcctcggccatgtcggcggtggcggcggccggagtgggggtcatgcccggcctagcgggg
gtgtcgcctgcgctagatggacgaggccagcaggccctcggcccctccccttcctcctcc
tctgcacaagcgagctctctcaaggtgaagctgccaagcaggcccagtgccaggaaggcc
aaatctccagggccggcacagtcatacgcggagcggccctcatcggtctcctcggtacac
tcggagggcgataacaaccgcaagactccgctcacgcaccgcgcctgggaggacagaccc
tcgtccacgggatccacgccgttcccctttaaccccctgatgatgcgactgccgagcagc
acgcccccctccgccctcacgcaggcgccggccgccgtgagtcaggtggcctcgccggcg
ccaccaccgccgccgcctcctcctccgcagcgcacgtgggagcgggagccggcgccgctg
ctctccgctcagtacgagacgctgtcggacagcgacgactga
DBGET
integrated database retrieval system
