Petromyzon marinus (sea lamprey): 116950289
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Entry
116950289 CDS
T09614
Symbol
SUPT4H1
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116950289 (SUPT4H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116950289 (SUPT4H1)
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116950289 (SUPT4H1)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116950289 (SUPT4H1)
RNA polymerase I system
116950289 (SUPT4H1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
116950289 (SUPT4H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Acc5b_avian_CoV
Motif
Other DBs
NCBI-GeneID:
116950289
NCBI-ProteinID:
XP_032823883
UniProt:
A0AAJ7X8F0
LinkDB
All DBs
Position
38:11627739..11634078
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AA seq
117 aa
AA seq
DB search
MSLETVPKDLRQLRACLLCSLVKTIDKFEYDGCDNCDTYLQLKGNREAVYDCTSSSFDGV
ICMMSPKDSWVAKWQRVDNFKPGVYAISVTGRLPLSIVRELKSRGIVYRSRDTSTKA
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggagacagtaccgaaggatcttaggcagctgcgggcgtgcttgttgtgctcg
ctggtgaagaccattgacaagttcgagtacgacggttgcgacaactgcgacacgtacctg
cagctgaaggggaaccgcgaggccgtctacgactgcacgagttcgtcgtttgacggagtc
atttgcatgatgagccctaaagacagctgggtggccaagtggcagagggttgacaacttc
aagccgggcgtttacgccatttccgtgacggggcgcctccctctctcaattgtgcgggag
ctaaagagccgagggatcgtgtacaggtcccgcgacacctccaccaaggcttaa
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