Petromyzon marinus (sea lamprey): 116950421
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Entry
116950421 CDS
T09614
Name
(RefSeq) RNA-binding protein 4-like
KO
K13187
RNA-binding protein 4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116950421
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116950421
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_occluded
RRM_7
RRM_5
zf-CCHC_2
zf-CCHC_5
zf-CCHC_3
DbpA
Motif
Other DBs
NCBI-GeneID:
116950421
NCBI-ProteinID:
XP_032824035
UniProt:
A0AAJ7TTX8
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Position
39:693680..700645
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AA seq
402 aa
AA seq
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MKIFVGNVPFQATKREIQELFEQHGEVTECEKIKDFAFVHMSAPGDAERAIVALRGHRLH
GAALDVEPSHGRGQQRGGSSNCSSSMLMLGGQCSSTTKMYVGNVTPDCTNVELRAKFEEF
GPVAECDIVKDYAFVHMEREDDARAAIRALDGSEFKGRRILVQLSRSKLRVAPGMGGSAN
CFRCGERGHWSKDCPTDSSRAAWALGGVPTGVPTGVPTGVPNPAAAAAAAAAAAAAAGRS
GLGGLGAMPGGAGGLGVVGVERYRNGGPMAAAAAAAAAAAAGGAAGGAGAGGGGLYGGAY
QAQAASFATAPHPAALGAAYDAYGGYGGAGDQQQQQQQQRDRFGFVDLYERFRARPYAAG
PAAPVFPAPGGPAELEFARRGAAPPPTASTTYGYNGYDFYRR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtgggtaacgtgcccttccaggcgaccaagcgcgagatccaggagctg
ttcgagcagcatggggaggtcaccgagtgcgagaagatcaaggacttcgccttcgtgcac
atgtcggccccgggggacgcggagcgggccatcgtggcgctgcgcggccaccgcctgcac
ggcgcggccctggacgtggagccgtcccacggccgcggtcagcagcggggcggctcctcc
aactgctcctcctcaatgctgatgctcggcggccagtgtagcagcaccaccaagatgtac
gtgggcaatgtgacgcccgactgcaccaacgtggagctgcgcgccaagttcgaggagttc
gggcccgtggccgagtgcgacatcgtcaaggactacgccttcgtgcacatggagagggag
gacgacgcccgcgccgccatccgcgccctcgacggctccgagttcaagggccgccgcatc
ttggtgcagctcagccgcagcaaactccgcgtcgcgcccggcatgggcggctcggccaac
tgcttccgctgcggggagcgcggacactggtccaaggattgccccacagacagcagccgc
gccgcctgggccctcggaggagtccccacgggggtacccaccggggtccccacgggggta
cccaacccggcggcggctgcggccgcagccgcggccgcggccgccgccgccggccgaagt
ggcctcggcggcctcggcgcgatgcctgggggcgccgggggcctcggcgtggtcggagtg
gagcggtaccgcaacgggggtcccatggccgcagctgcagcggcagccgccgccgccgcg
gctgggggagcggccgggggagccggtgccggaggaggaggcctctacgggggcgcctac
caggcccaggccgcctcgttcgccacggccccgcaccccgccgcactcggcgccgcatac
gacgcctacggggggtacgggggcgccggggaccagcagcaacaacagcagcagcagcgg
gaccgcttcggcttcgtggatctgtacgagcgattccgggcgaggccctacgcggcgggg
cccgcggcgcccgtgttccccgcgccgggcgggcccgcggagttggagttcgcgaggcgc
ggggccgcgccgcctccaaccgcctccaccacctacgggtacaacggatatgacttttac
cgccggtag
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