Petromyzon marinus (sea lamprey): 116950427
Help
Entry
116950427 CDS
T09614
Name
(RefSeq) syntaxin-17-like
KO
K08491
syntaxin 17
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04130
SNARE interactions in vesicular transport
pmrn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116950427
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116950427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116950427
Membrane trafficking [BR:
pmrn04131
]
SNARE
Syntaxin (Qa)
Stx-sER
116950427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
C19orf12
IncD
Phage_holin_3_6
DUF1654
CyanoTRADDas_TM
SKA1
Motif
Other DBs
NCBI-GeneID:
116950427
NCBI-ProteinID:
XP_032824042
UniProt:
A0AAJ7TWR7
LinkDB
All DBs
Position
39:complement(739377..749402)
Genome browser
AA seq
334 aa
AA seq
DB search
MAESGAGGGAATQVPLRRLEPALNKFTRVAIPTDLERLARHQVNIEKYNSQQDWKLLHQE
QINASRTVQQLQFNVREMEKLRLLLRTADGAAFEHIVQPARDLASSAIAAFLRHPATSCP
PAFSLPPCDVRGRDEGREGAASRMTRSASDFSELLVRDDAASGPTEGAGEQAGPPSTPPS
SPQLQDQLLALHEIPQEEDASESWEHLCEELTELNSLVTDFSYMVHSQQEAIDSIEDKLE
MASDNVRQGTKQIGKAAKSGTVMLPVAGAVLGGILGGPVGMLVGFKVAGVAAALGGGLLG
FTGARAFQRHRRARIDTQLQQLSSSCPELSQLQQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcggggccggcggcggggctgccacgcaggtgccgctgcggcgcctggag
ccggcgctcaacaagttcacccgagtggccatccccaccgacctggagcgcctggcgcga
caccaggtcaacatcgagaagtacaacagccagcaggactggaaactgctccatcaggag
cagatcaacgcgagccgcaccgtgcagcagctgcagtttaacgtgcgggagatggaaaag
cttcgtttgctgcttcgcacagccgacggcgctgccttcgagcacattgtgcagccggca
cgcgaccttgcttcctctgccatcgccgccttcctgcgccaccctgccacgagctgcccc
cccgcgttctcgttgccgccctgcgacgtgcgcgggcgcgacgagggacgggaaggagcg
gcgtccagaatgacgcgctccgccagcgacttctccgagctgctggtgcgcgacgacgcc
gcatcggggcccacggagggggcaggggagcaagcggggccaccctcgacacccccttca
tcgccgcagctgcaggatcagctgctcgcgctgcacgagatcccacaggaggaggatgcg
tccgagtcgtgggagcacctgtgcgaggaattaacggagctgaactccctggtcactgac
ttctcgtacatggtgcatagccagcaagaagccatcgactccatcgaggacaagttggag
atggcctctgacaacgtacggcaaggaacgaagcagatcggcaaggcagccaagtctggg
acggtgatgctgccggtggcgggggcggtgctgggcggcatcctgggcgggcccgtgggg
atgctcgtcggcttcaaggtggcgggggtggcggcggcgctgggcggggggctgctgggt
ttcacgggcgcccgcgcgttccaacggcatcggcgggcacgcatcgacacccagctccag
cagctatcgagcagctgccccgagctgagccaattgcagcagtag
DBGET
integrated database retrieval system