Petromyzon marinus (sea lamprey): 116950501
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Entry
116950501 CDS
T09614
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116950501 (NPHP1)
Cilium and associated proteins [BR:
pmrn03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116950501 (NPHP1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
NOA36
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
116950501
NCBI-ProteinID:
XP_032824213
UniProt:
A0AAJ7X8R0
LinkDB
All DBs
Position
39:9042095..9052537
Genome browser
AA seq
757 aa
AA seq
DB search
MSGGSVVITIIILMTTRSKVRSPLQRVQRSIDDVKKRLDALIAEERDGGQRSSGPGNREL
GRRCEDLRAHAEGVRRELAALGKADEPAPVSDYDGKKEEEGRRLQRILAELRQLARRCAP
PDSREGTESEGEDDEEGEEGEDDDDEGEEGEDDDDEGEEGEDDEDEDDDEDEEGEEVKQV
KGASVQQAEEAEGGGRQTREVQLKTFVALSDFTSQEAGDLSFRKGAVLLVLRKKPDGWWE
AQDEHGARGMVPSTYLQHQKPGKDEDDEEDQDDDEEDDEDDEESVPSSEEEAGSRRHDTS
SGRGLKAALDDTSASAAMTAMGAVPPGFRPSTLHRLLLLRGESADEFSTRGHLLPRLGPS
QLSFRDLQWSEEQGGVRPRTCRVSRTFYLAGAKAIPPPGPSVQVASLHVRVCLFDGRRVL
SNVHAVRATWRPRNPGRWTFSPRVGGLLPSLLDGEFFARSDNASPNLGLLFELGISYVMR
SHAAATDTSPAAELELGELSCGWAFMRLFAETGLAIASKSYELDVHGGTPYERDVELDPS
AAGRAGGALRQIFSNARPRLLVRVRTPAAPLRRALDRLPQTLVSCVCYVSVLVMYRQLLA
GALLEGRGDETDARPVADDVLASLGELVGLPDVMDALRSVWAERRAGLRRAERGDRRLME
ETFRRAHRDTAQLLLHLANLPPNRWGHGPNEAERWMAIGSILSQGRQAGGSLLGLLSPEL
QHEPFHIDQVAFSLTRDAPIHARESGGGSGGEVADAV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggcagcgtcgtcatcaccatcatcatcctgatgacgacccgatccaaagtg
aggagtcccctgcagagggtgcagaggagcatcgacgacgtgaagaaacgtctcgacgcg
ctcatcgccgaggagcgagacggcggacagcggagcagcggccccggcaacagggagctg
ggacggcgctgcgaggacctccgggcgcacgcggagggcgtccggcgggagctcgctgcg
ctcggaaaggcggacgagccggcgcccgtctccgattacgacggcaagaaggaggaagag
gggcggcgcctgcagcggatcctggcggagctgcgacagctggcgcggcggtgtgcaccg
cccgacagtcgtgaaggcaccgagagcgaaggagaggatgatgaagagggagaggaagga
gaggatgatgatgatgagggagaggaaggagaggatgatgatgatgagggagaggaagga
gaggatgatgaggatgaagatgatgatgaagatgaagagggggaggaggtaaagcaggtg
aagggggcgtcggtgcaacaggcagaggaagcggagggtggaggaaggcagacgagagag
gtgcaacttaaaacgtttgttgctctcagcgacttcacgtcgcaggaggccggcgaccta
tccttcaggaagggggcggtgctgctggtgctgaggaagaagccggacgggtggtgggag
gcacaggacgagcacggcgcacgcgggatggtgcccagcacgtacctgcagcaccagaag
ccgggcaaagatgaagacgacgaagaagaccaggatgacgacgaagaggatgacgaggac
gacgaggagtcggttccttcgagcgaagaggaagccggcagcaggcggcacgacacctcg
tcggggcgcggcctcaaagcagctctagacgacacgagcgccagcgccgctatgacagcg
atgggcgccgtccccccgggattccgcccgtccacactgcaccggctgctgctgctgcgc
ggcgagagcgcggacgagttcagcacgcgcggccacctcctgccacgcctcggcccctcg
cagctctccttccgcgacctgcagtggagtgaggagcagggcggcgtgaggccgcggacg
tgccgagtcagccgcaccttttacctcgccggcgccaaggccatcccgccgccgggaccc
agcgtgcaggtggcgagcctccacgtgcgcgtgtgcctgtttgacgggcgccgcgtgctg
agcaacgtgcacgcggtgcgcgccacgtggcggccgcgcaacccgggccgctggaccttc
tctccccgcgtcggcgggctgctgccgagcctcttggacggcgaattctttgcccgctcc
gacaacgcctcgcccaatctcgggctgctgttcgagttgggcatctcgtacgtaatgcgg
tcgcacgccgccgccaccgacacgtcaccggcggcagagctggagctcggtgagctcagc
tgcggctgggccttcatgcggctgttcgccgaaaccggcctggccatcgccagcaagtcc
tacgagctcgatgtgcacggcggcaccccctacgagcgcgacgtcgaactggacccctcg
gccgccggccgcgccggcggcgccctccggcagatcttttccaacgccaggccacggctg
ttggtgagggtgcgcaccccggcggcgccgctgcggcgggcgctggaccgcctgccgcag
acgctggtgagctgcgtctgctacgtgtcggtgctcgtgatgtaccggcagctgctggcc
ggcgcgctgctcgagggtcgcggcgacgagacggacgcccggccggtggccgacgacgtg
ctggcgtcgctgggcgagctcgtcgggctgcccgacgtcatggacgcgctgcgcagcgtg
tgggccgagcggcgagcgggcctgcgccgggcggagcgcggagaccgccgcctcatggag
gaaacttttcggcgggctcaccgcgacacggcgcagctgctgctgcacctggcgaacctc
ccgccgaaccgatggggccacgggccgaacgaggccgagaggtggatggcgatcggatcc
atcctgagccagggccgccaggcgggaggctccctgctgggactgctgtcgcccgagctg
cagcacgagccgtttcacatcgaccaggtggcattctcgctcacgagggacgcgccgatt
catgcacgggagagcggtggcggcagtggcggggaggtcgccgatgcggtttag
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