Petromyzon marinus (sea lamprey): 116950541
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Entry
116950541 CDS
T09614
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116950541 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmrn01007
]
116950541 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116950541 (FARSB)
Enzymes [BR:
pmrn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
116950541 (FARSB)
Amino acid related enzymes [BR:
pmrn01007
]
Aminoacyl-tRNA synthetase
Class II (U)
116950541 (FARSB)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116950541 (FARSB)
Prokaryotic type
116950541 (FARSB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
116950541
NCBI-ProteinID:
XP_032824293
UniProt:
A0AAJ7TUD4
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All DBs
Position
39:10544771..10569261
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AA seq
594 aa
AA seq
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MPTVEVKREALLKALGRVYTDEEFDKLCFEFGLELDEVTSEKEQVSREQGKERAVGASED
VIYKIDVPANRYDLLCVEGLARGLQVFKERCEAPVYRRVEPADGKMQRLVISPETASVRP
YAVAAVLRNISLDKERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTVSGPFVYTARPPA
EIKFTPLNGSREHTACELMELYRTDSHLRHYLHILDGRPLYPVIVDARGVVLSMPPIING
NHSKITLSTRNVFIECTATDPYKAKVVLDTLVAMFSEYCAEPFTVEAVEVVSPDGQTTLF
PELPYRTEVLSAEYINSRVGIRESPERLARLLTRMCLKSEVAADGSQICVEVPPIRSDII
HACDIMEDAAIAYGFNNIARTIPATLTIAHQFPLNKLTDLLRVDVAAAGFTEALTFALCS
HEDVTEKLLRDVSSTRAVLIANPKSADFQVARTTLLPGLLKTLAANRNMALPLKLFEISD
VVLQDSSTDVGTRNERRLCAVYYNKAPGFEVIHGLLDRVMQLLAVASRSSAQGNDKAYHI
AADQDPTFFPGRCACVRVGSAPVGRLGVLHPGVLAHFDLPLPCAALEISLEPFL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtggaagtgaaacgcgaggcgctgctcaaggccctggggcgcgtctacact
gacgaggagtttgacaagctgtgctttgagtttggtttagagttggatgaagtgacgtcg
gagaaggagcaggtgagccgcgagcagggcaaggagcgcgccgtgggagcctccgaagat
gtcatctacaagatcgacgtgccggccaaccgctacgacctgctgtgcgtggaggggctg
gcgcgcggcctgcaggtcttcaaggagaggtgtgaggccccagtgtatcgccgcgtggag
ccagccgatggcaagatgcagcgtctggtcatctcaccagagacggcgtccgtgcgcccg
tacgccgtggccgcggtgctgaggaacatctctctcgacaaggagcgctacgacagcttc
atcgagctgcaggagaagctgcaccagaacgtttgccggaagcgcacgctggtggcgatc
ggcacgcacgacctggacacggtgtcgggcccgttcgtgtacacggcgagacccccggcc
gagatcaagttcacgccgctcaacggcagccgcgagcacacggcctgcgagctcatggag
ctctaccggaccgacagccacctccgtcactacctgcacatcctggacggccgccccctg
taccccgtcatcgtggacgctcgcggagtcgtgctctccatgccgcccatcatcaacggg
aaccactcgaagatcacgctgtcgacgaggaacgtcttcatcgagtgcacggccaccgac
ccctacaaggccaaggtcgtgctggacacgttggtggccatgttcagcgagtactgcgcg
gagcccttcacggtggaggcggtggaggtggtgagccccgacggacagacgaccctgttc
ccggagctgccgtacaggacagaggtgctgagtgccgagtacatcaactctcgcgttggc
attcgcgagtccccggagcggctggcgcgcctgctcacgcgcatgtgcctcaagtcagag
gtggccgccgacggctcccagatctgcgtggaggtcccgccgatccgctccgacatcatc
cacgcctgcgacatcatggaggacgccgccatcgcctacggcttcaacaacatcgcccgc
accatcccggccaccctcaccatcgcccaccagtttcctctcaacaagctgacggacctc
ctgcgggtggacgtggcagccgcggggttcacggaggcgctcaccttcgcgctgtgctcc
cacgaggacgtgacggagaagctgctgcgggacgtgagcagcacgcgagccgtgctcatc
gccaaccccaagagcgccgacttccaggtggcgcgcaccactctgcttcccggcctcctc
aagacgctcgccgcaaaccgcaatatggcgctgcctctcaaactctttgagatctcagac
gtcgtgctgcaggactcaagcacagacgtgggcacgcgtaacgagcgccgtctctgcgcc
gtctactacaacaaggccccgggcttcgaggtgatccacggcctcctcgaccgcgtcatg
cagctgctggcggtcgcgagccggagctcggcgcagggcaacgacaaggcctaccacatc
gcggcagaccaggaccccacgttcttcccagggcggtgtgcgtgcgtgcgcgtgggctcc
gcgcccgtgggccgactcggcgtgctgcacccgggcgtgctcgcgcatttcgacctcccg
ctgccgtgcgccgccctcgagatctcgctggagcccttcctgtga
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