Petromyzon marinus (sea lamprey): 116950603
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Entry
116950603 CDS
T09614
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03022
Basal transcription factors
pmrn03420
Nucleotide excision repair
pmrn04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116950603 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
116950603 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116950603 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmrn01001
]
116950603 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116950603 (CDK7)
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116950603 (CDK7)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116950603 (CDK7)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
116950603 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
116950603 (CDK7)
Protein kinases [BR:
pmrn01001
]
Serine/threonine kinases: CMGC group
CDK family
116950603 (CDK7)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116950603 (CDK7)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
116950603 (CDK7)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116950603 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Motif
Other DBs
NCBI-GeneID:
116950603
NCBI-ProteinID:
XP_032824399
UniProt:
S4R7M8
LinkDB
All DBs
Position
40:complement(8424414..8434626)
Genome browser
AA seq
358 aa
AA seq
DB search
MAAAASAALNGSAAMAAAAKSRAKRYDKIDFLGEGQFATVYKAMDKVTNKIVAIKKIKLG
HRTEAKDGINRTALREIKLLQELNHPNIIGLLDAFGHKSNISLVFDFMDTDLEVIVKDTS
LVLSPANIKSFMVMTLQGLEYLHMHWILHRDMKPNNLLLDEQGVLKLADFGLAKSFGSPS
RVYTHQVVTRWYRSPELLFGARMYGVGVDMWAVGCILAELLLRTPFLPGDSDLDQLSKIF
EALGTPTEELWPGMTNLPDYVEYKSFPGTPLENIFTAATDDLLELLQGLFTFSPAARLTA
TQAMQMPYFSNRPGPTPPAQLPRPSFAREIMKEHERGTIKRKRFEDAEAGCLAKKLIF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcagcaagcgccgctttaaatggttcggcggctatggcagcggcggcgaag
agtcgagcgaagcgctacgacaagatcgacttccttggcgagggacagtttgccacggtc
tacaaggccatggacaaagtaacgaacaaaattgttgcaataaaaaagataaaactggga
cacagaacagaggcaaaggatggcattaacaggactgccctacgggaaatcaaattgctg
caggaattgaaccaccccaacatcataggactcttagatgcctttggccacaagtcaaac
atcagcttggtgtttgacttcatggacactgacctcgaggtaattgttaaggatacaagc
ctggttctgagtcctgcgaacatcaagtccttcatggtgatgaccctccagggcctggaa
tacttgcacatgcactggattttacacagggatatgaagcccaacaatcttctgctggat
gagcagggggtgctcaaactggccgactttggtttggccaagtccttcggcagtccaagc
agagtgtacacccaccaggtggtgacgcggtggtaccgctctccggagctgctctttgga
gctcggatgtacggagtcggggtggacatgtgggccgtcggctgcatcctcgccgagctg
ctcctccggacaccgttcttgcctggtgattcggatctcgatcaactgagcaaaatcttt
gaagcgcttggaacacccacggaggagctgtggccggggatgacgaacctccctgactat
gtggagtacaaatccttcccgggcaccccgctcgagaacatcttcacagcggccaccgac
gatctcctggaactcctccagggcctctttacattcagccctgctgcccgcctcactgcc
acgcaggcgatgcagatgccctacttcagcaacaggccgggtcccacgcctcccgcccag
ctgccacggcccagctttgcccgcgaaatcatgaaggagcacgagcgtggcaccatcaaa
cggaagaggttcgaagacgctgaagcagggtgcctggccaagaagctgatcttctga
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