Petromyzon marinus (sea lamprey): 116950643
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Entry
116950643 CDS
T09614
Symbol
UTP15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog isoform X1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116950643 (UTP15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116950643 (UTP15)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116950643 (UTP15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
116950643
NCBI-ProteinID:
XP_032824459
UniProt:
A0AAJ7TVR6
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Position
40:4424062..4440355
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AA seq
589 aa
AA seq
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MTSRRTSKVGVVTQPRTESDVVTRWSTRRSHVESRSPDPGLVGGGVSYQALPGTSHRMQI
AAMGSFRPTRIQSIPQLGEKISNETLYWKAYRSPVQINEYGAVTHVHFSPTAPHHFAVSA
STRVHVYAAHSAEPQRTFTRFRDVAFGATFRADGRLLVAGSEEGVVRVFEAHGRVPLRSF
DGHKRAVRVSCFMSDGLRVLSGSDDCTARLWDVATGAQLSSFASHGDYVRSAHVCTLNPN
LFITGSYDHMVRVFDVRQPDAVLTLDHGFPVESVLAFPSEGLYASAGGRLVKVWDAVRGG
HLLACLRHHHKTVTALTLNGAGDRLLTASLDRHVKVLSTTTFKPVHSFDYPAAILSLGIS
PDDQTLVAGMTNGLLSVRNRKTEERQKPEPRRRRGATYRYYVRGKDYLPKKGDVKVSFQA
RTKQQTYDKLLRTFQHSRALDAVLEAQVASRHPQVTVSVMAELARRQALQSAIAGRDEQQ
LLVLLAFLLRNMLDPRFSSVLTTVADALIDIYGSTLHKSRAVAQRFEKLAELIEREVSFQ
QELLAAMGMMDALFAANTERKHAQGDALPAPAPAPAVPAVPATPAVATS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacgacgcacgagtaaagtcggtgtggtgacgcaaccacgcacggagagtgac
gtcgttacgcggtggtccacacgccgatcacacgtggagtcgcggagcccggaccccggc
ctcgtggggggcggcgtctcttaccaagctctgccggggacctctcatcgaatgcaaata
gccgccatgggttcctttcgtccaactcgcattcagagcatcccccaacttggtgagaaa
ataagcaacgagaccctctactggaaggcttatcggagtccggttcagatcaacgagtat
ggcgcagtcacgcacgtgcacttctctccgactgcgccgcaccacttcgccgtgtccgcc
tctaccagggtgcacgtgtacgcggcccactccgccgagcctcagcgcacgttcacgcgg
ttccgcgacgtggccttcggcgcgacgttccgcgccgacgggcgcctgctggtggccggc
agcgaggagggggtggtgcgagtgttcgaggcgcatggacgggtgccgctgcgcagcttt
gatgggcacaagcgtgcggttcgcgtgtcgtgcttcatgagcgacgggctgcgcgtgctc
tcggggtcggacgactgcacagcgcggctctgggacgtggcgactggcgcgcagctttcg
tccttcgcgagccacggagactacgtgcggtcggcgcatgtgtgcaccctcaaccccaac
ctcttcatcaccggctcgtacgatcacatggtgcgggtgttcgacgtgcggcagccggac
gcggtgctgacgctggaccacggcttccctgtcgagagcgtgctcgccttcccctctgag
gggctctacgcgtcggccggcggtcggctggtgaaagtgtgggacgccgtgcgtggaggg
cacctcctcgcctgcctgcggcaccaccacaagactgtgacagcgctcaccctcaacggc
gccggcgaccggctgctcaccgcctcgctcgacaggcacgtgaaggtgttgagcacgacc
acgttcaagccggttcacagcttcgactacccggctgccatcctcagcctcggcatctct
ccggatgaccagacgctggtggctgggatgaccaatgggcttttgagcgttcggaaccgc
aagacggaggagcgccaaaagccggagcctcgccgccgacgcggcgccacctaccgctac
tacgtccgcggaaaggactacctgcccaagaagggcgatgtcaaggtgagcttccaggcg
cggactaaacagcagacgtacgacaagctgctcaggaccttccagcactcgcgcgccctg
gacgccgtgctcgaggcccaggtggcgtcgcgacacccccaggtgacggtgagcgtgatg
gcggagctggcgcgcaggcaggcgttgcagagcgccatcgccgggcgcgacgagcagcaa
ctgctggttctgctcgcgttcctgctgcggaacatgctggaccctcgattctcctccgtc
ctcaccacggttgctgatgccctcatcgacatctacggctcgacgctgcacaagtcgcgg
gccgtggcgcagcgcttcgagaagctggcggagctcatcgagcgcgaggtctccttccag
caggagctgctcgccgccatgggcatgatggacgccctcttcgcggccaacaccgagcgc
aagcacgcgcagggcgacgcgctgccggccccggccccggccccggccgtgccggccgtg
ccggcgactcccgcggtcgcgacgtcgtag
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