Petromyzon marinus (sea lamprey): 116950725
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Entry
116950725 CDS
T09614
Name
(RefSeq) semaphorin-6A-like isoform X1
KO
K06842
semaphorin 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
LapA_dom
Motif
Other DBs
NCBI-GeneID:
116950725
NCBI-ProteinID:
XP_032824612
UniProt:
A0AAJ7TXP8
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Position
40:11961904..12115590
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AA seq
1238 aa
AA seq
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MGLGGAHLPVLPPTALILLALLRPTPLCCFPEDPKPISVLDAKYSSRYPVFLGHRVQEND
SIGETRSHRLDYQLMLKLDRLLLVAERDHIYGLDLDAPLSDEIYYDKRLTWRSSKQERET
CFMKGKQEAECRNYIKVLLRRGDNSMFVCGTNAFNPMCRNYLLDTLEVEGEDISGMAKCP
YDSRQSNVALFSDGMMYSGTVTDFLAIDAVVYRSMGGGPTLRTIKHDSKWLKEPHFVHAV
EYGEHVYFFFREIAVEYSVFGKVVVSRVARVCKDDAGGSQRVLDKHWTSFVKARLNCSVP
GDTHFYFNELQALTDIITINGRDVVLGVFTTPANSIPGSAVCAFDMEELLSVFRGRFKEQ
KSSDSGWTTVPEDKLPKPRPGCCAGSDFADEYKSSSDFPDDTLAFIKTHPLMEDAVGSIT
EQPWFIRTLVRYRVTRLAVDPSAGPHGRHTVLFLGSEMGLVLKVLSWPPPGPDSPGSLLL
EQIDVYNPKLCNRGDKEDRRILGIQLDVESHTLFVAFSACVVRLPLSRCERHARCRKNCI
AARDPYCGWQDDSCARIISHTTDLYEQDVDFGDTKGMADCQVTEVAHGAAAADTVGTEAP
LRPPHVGRVALGRSWSPDRRRLDADDLAEALPTGALPPDGVVRETRVAESSSLVPAALLA
ICVVSAFVLGAVLAVLVTYCYVGRRRRERHSKAPSDSPPGRLYGAPQPRDLHPAARGVPA
PPHKKNGVLVGAACEDKDGAAQRKKPKSELLLLQQQQQQHRQHLIAPVGTALLAVPGHDK
QARVPNGVRKPPEALTSPPPPPAPHPELPGLPTPESTPVLQLKSAAVGSNNNEYDAAAQG
YGVVVVQERDGHSGSSDSSGRGSNRHSLQRCPQRVPRALILPTERGRSFLYGDVCDSDSE
RGVRLGAIFPTVESPQGAVVGGHGSPGWALPRPPPAGGGSFSPHAKRPQDVLDVAAGGER
AESRGGEVAGLDGGGGVESPDSSHETPPRVPHRDVSLKRTPSQHTPSRRVDVPSSGGPML
ERRPSTTRSGSSSGSLSRSHNHNHSHHRQQQQQQQQGSSNYSGGNGGGGGLGVPSCTMIV
PATSCCSPRLAVGRPPPAPARTDSIRSRTDAALETALAYANARQHPVCRAESCRVRPVTR
AESMRAATYQQQQQQQQQQPHLASPSSASSPSASLIGTGLHMATTPNGGYHSLPRGTHGR
RGHVARVAKPDVPPKPFSNVASLTVASQAAGPSHQFEY
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcggaggggcccacctgccggtgctgcccccgacggccctcatcctcctggcc
ttgctccgcccgactccgctctgctgcttccctgaggaccccaagcccatcagcgtcttg
gacgccaaatatagcagtcgttacccggtgtttctgggccaccgggtgcaggagaacgac
agcattggggagacccgttcacaccgcctcgattaccagctcatgttaaagctcgatcgt
ttgctgctcgtcgctgagagagatcacatctatggcctcgacttggacgcgcccctatca
gatgagatatattacgacaagaggctaacttggaggtcaagtaaacaggagagggagacg
tgcttcatgaagggtaaacaggaggcggagtgccggaactacattaaagtgctgctcagg
agaggagacaacagcatgttcgtgtgtggcaccaacgccttcaaccccatgtgcaggaac
tacctgcttgacaccttggaggtggaaggagaagacatcagtggcatggcaaagtgtccc
tacgattcacggcagagcaacgtggcactcttttctgatggaatgatgtattctggaacg
gtcacggactttctggcgatagatgcagtcgtgtacagaagtatgggtgggggtcctaca
ctgagaactatcaagcacgactcaaagtggctcaaagagccccattttgtccacgccgtg
gagtacggggagcacgtctactttttcttccgtgagatcgccgtggagtacagcgtcttc
ggcaaggtggtggtgtcgcgcgtggcgcgcgtgtgcaaggacgacgccggcggctcgcag
cgcgtgctggacaagcattggacgtccttcgttaaagcgcgccttaattgctccgtcccc
ggcgacactcacttctactttaatgagctacaggccctgacggacattatcaccatcaac
ggcagagacgtagtgctgggcgtcttcaccacccctgccaacagcatcccaggctctgcc
gtgtgtgcgttcgacatggaggaactgctcagcgtcttccgcggccggtttaaggagcag
aaaagttccgattcgggctggaccacagtgcccgaggacaagcttcccaaacccagaccg
ggatgctgcgccggctctgattttgccgacgagtacaagagttcctcggacttccccgac
gacaccctggcctttataaaaacccacccgctgatggaggatgccgtgggctccatcaca
gagcagccttggttcatcagaaccctcgtcagataccgggtgacccgcctggcagtggac
ccctcggcaggcccgcacggccgccacacagtgctgttcctgggttctgagatgggcctg
gtgctgaaggtgttgtcatggccaccacctggacccgactcgcctggcagcctcctcctc
gagcagatcgacgtctataaccccaaactgtgcaacagaggggacaaggaagaccgccgc
atcctgggcatccagctggacgtcgagagccacacgctctttgtcgccttctccgcctgc
gtcgttcgcttgccgctgagtcgctgcgagcgccacgccaggtgtaggaagaactgcata
gcggcacgtgatccatactgcggctggcaggacgactcctgcgcccgaatcatctcgcac
acgacggatctctatgagcaggatgtggactttggtgacacgaaagggatggccgattgc
caagtgacagaggtggcccatggcgctgccgccgctgacaccgtcggaacggaggccccc
cttaggcccccgcatgtgggccgggtggcactcggtcggtcctggtcccctgaccggcgc
cggctcgacgccgatgaccttgcggaggcgctgcccacgggcgcgcttccccccgatggt
gtcgtgcgcgagacccgagtggcggagagcagctcgctggtgccagcggcgctgctcgcc
atctgcgtggtgtcggcgttcgtgttaggcgccgtcctcgccgtgctcgtcacctactgc
tacgtgggccgccggcgccgcgagcgccactccaaggcgccctcggacagcccgccgggg
cggctgtacggagcgccgcagccccgcgacctccaccccgccgcgcggggcgtgccggcg
ccgccgcacaagaaaaacggcgtcctcgtgggcgccgcctgcgaggacaaggacggcgcc
gcccagcgcaagaagcccaagtccgagctgctgctgctgcagcagcagcagcagcagcat
cgccagcacctgattgcgcccgtcggcacggccctgctggcggtgccgggacacgacaag
caggcgcgcgtgcccaacggggtgcgcaagccccccgaggcgttgacgtcgccgccgccg
ccgccggcgccgcacccggagctgccggggctgccgacgcccgagtcgacgcccgtgctg
cagctgaagagcgccgccgtgggcagcaacaataacgagtacgacgcggccgcgcagggc
tacggcgtcgtcgttgtccaggagagggacggccactcgggctccagcgactcgtcgggc
cgcggctccaaccgccactcgctgcagcgctgcccgcagcgggtgccgcgcgccctcatc
ctgcccacggagcgcgggcgcagcttcctgtacggcgacgtgtgcgacagcgactcggag
cgcggcgtccgcctcggcgcaatcttccccacggtcgagtctccccagggcgcggtggtg
gggggccacggctccccgggatgggcgttgccccggccgccgccggcggggggaggctcc
ttctcgccgcacgcaaagaggccccaggacgtcctggacgtggccgcgggcggcgagcgg
gcggagagcagagggggggaggtggccgggttggacggcggcggtggcgtcgagtcgccg
gactcctcgcacgagaccccgccgcgggtgcctcacagggacgtgtcgctcaagcgcacg
ccctcgcagcacacgccgagccggcgcgtcgacgtgccctcctctggaggcccgatgctc
gagcgccggcccagcacgacgcgctctgggagcagctcggggtcactgagccgcagccac
aaccacaaccacagccaccaccggcagcagcagcagcagcagcagcagggctccagcaac
tacagcggtgggaacgggggcggcggtggcttaggcgtgccgtcttgcacgatgattgtg
ccggcgacgtcttgctgcagtcctcggctggcggtcggccggccgccgccagcgccagcg
agaactgactcgatacggtcacggacggatgccgccctggagacggcgctggcgtacgcc
aacgcgcggcagcacccggtgtgccgcgccgagtcgtgccgcgtgcgcccggtaacgcgc
gccgaatcgatgcgcgccgccacctatcagcaacagcagcagcagcagcaacagcagcct
catttggcttctccctcatcggcctcttccccatcagcatcgctcatcggtactggcctg
cacatggccacgacgccgaacggaggataccattctctgccgaggggtacccacggtagg
agggggcacgtggccagggtcgccaagcctgatgtgccgcccaagcctttctccaacgtt
gcttccctgacagtggcaagccaggcggccgggccttcgcaccagtttgagtattaa
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