Petromyzon marinus (sea lamprey): 116950843 Help Entry 116950843         CDS       T09614                                  Symbol APTX Name (RefSeq) aprataxin isoform X1   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn03410   Base excision repair Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     116950843 (APTX)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pmrn03400]     116950843 (APTX) Enzymes [BR:pmrn01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      116950843 (APTX)     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      116950843 (APTX)     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      116950843 (APTX) DNA repair and recombination proteins [BR:pmrn03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      116950843 (APTX)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      116950843 (APTX) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C zf-C2HE HIT FHA_2 Motif Other DBs NCBI-GeneID:  116950843 NCBI-ProteinID:  XP_032824842 UniProt:  A0AAJ7X8E3 LinkDB All DBs Position 40:complement(3916377..3930518) Genome browser AA seq 398 aa AA seqDB search MWWWWRMMRMRRVGSVCVQAPPLMSRAPAALNRVPLKVKGLFHDIISVREARDFPSPLPT MVCHADLLAVSVQAMYSKRVVLIKQLGVNPTSIETVELGHHGEAELRPGQTLHVVNASYP MHVEFRGPASPPPSTLASASASASALAPAPTTSPSGRPSHLPKRAWHSPSGSDSQAGSIR KFLKFVGGKDRAKDNSPSVSPTKGNAQKSPTGQRGQPAHWSQSLRDAMDDPSVQIFRDDQ VVVILDKFPKARHHWLVLPWRFVANVGVLRADHLPLLRHMHDVAERLSRQVQPLGAATAP PTFRLGYHAIPSMSRIHMHVISQDFDSPRLKTKKHWNSFTTGYFIDSEVVMRMVEEDGRV VIPEDTAELLKKPLQCHMCHREISTIPKLKEHLGTHKL NT seq 1197 nt NT seq  +upstreamnt  +downstreamnt atgtggtggtggtggaggatgatgaggatgaggagagttggatccgtgtgcgtgcaggcc ccgccactgatgtcacgggccccggccgcgctgaaccgcgtaccattaaaagtgaagggt ttgtttcacgatataatttccgtccgtgaggcgagagatttcccctccccccttcccacc atggtgtgccatgcagacctgctggctgtttcagtgcaggcaatgtactccaaaagggtg gtgcttattaaacagctgggcgtgaatccgacgagcatcgagacggttgaactgggccac cacggcgaggccgaacttcggcccgggcagacgctgcacgtcgtcaacgcctcctacccg atgcatgtcgagttccgcggtccggcctcccccccgccctccaccctggcctccgcttcg gcctccgcctcggccctggccccggccccgaccacgtcgccatcagggcgaccgtcccat cttcccaagcgcgcctggcactccccgtcggggtcggacagccaggcgggatccatcagg aagttcctgaaattcgtcggcgggaaggaccgcgcgaaggacaactccccgagcgtctcg ccaaccaaggggaacgcgcagaagagtccgaccggccagcggggtcagccggcccactgg agtcagagcctgagggatgccatggatgacccaagtgtgcagatcttccgcgatgaccag gtggtggtgatcctcgacaagttccccaaggcgcgccaccactggctcgtgctgccctgg cggttcgtggcgaacgtgggcgtgctgcgcgccgaccacctgccgctgctgcgccacatg cacgacgtggccgagcggctgtcccgccaggtgcagccgctgggcgcggcgacggcgccg ccaacgttccgcctggggtaccacgccatccccagcatgagccgcattcacatgcacgtc atcagccaggacttcgactcgccgaggttgaaaactaagaagcactggaactctttcacc acggggtacttcatcgactcggaggtcgtgatgcgcatggtggaggaggacgggcgtgtg gtgatacccgaagacacggcggagctgctgaagaagcccctgcagtgccacatgtgccac cgtgagatctccaccatccccaaactcaaggagcacctgggcacacacaagctgtaa

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