KEGG   Petromyzon marinus (sea lamprey): 116950995
Entry
116950995         CDS       T09614                                 
Name
(RefSeq) protein transport protein Sec31A-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116950995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmrn04131]
    116950995
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmrn02044]
    116950995
Membrane trafficking [BR:pmrn04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    116950995
Secretion system [BR:pmrn02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   116950995
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EIPR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N TPR_Sec16 Beta-prop_HPS5 Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_DCAF4 Prp18
Other DBs
NCBI-GeneID: 116950995
NCBI-ProteinID: XP_032825143
UniProt: A0AAJ7X9L9
LinkDB
Position
41:complement(10595466..10640743)
AA seq 1277 aa
MKLKEIDRTANQAWSPAAQHPIYLATGTSAQQLDATFSTNAALEVFELDLADSSTDLKLR
GTLTTENRYHKLVWGAPLPGEEGAGVVVGGSDNGVLILYAADKVLSGDADAIIGENDRHT
GPVRALDFNPFQANLLASGANDSEIYIWDLNNFGTPMTPGSKSQMREPAEDVVCVAWNRQ
VQHILASASPSGKAVVWDLRKNEPIIKVSDHSNRMRCSGMAWHPDVATQLVVSSEDDRMP
VIQMWDLRFATSPLKVLESHSRGILAIAWCQADPELLLSCAKDNRILCWNPNTGEVVYEL
PTSTQWCFDIQWCPRNPALLSAASFDGRIGIYSVMGGSMAAQTQSQADKISSSFGNLDPF
GTGQPLPPLQLPPQSPTTQSTFIPPLKRPPRWIRRPVGACFAFGGKLVTFGSEKAAPAGS
VAGPRQVFVSQVVTETALLRRSDELQGALRSGRCLDYCVARAAAAHNDFERSVWNFLKVN
FEQEPRTHCLKLLGYSADELDAKISAILREETSPDPDQNATEGSVKSVDDLEDEALDKED
EVESFPPGIPAAPQEATATTTTSDGSFKVSTTADVDGLISQALLLGNFERAVELCLHDGR
MADAVILSISGGSELLASTQKKYFARSQNKISRLVSAVVSRDWEDIARSCDLDNWKEALA
ALLTYAKPHEFPALCDTLGSRMEQEGDETLCAQACLCYICAGNVEKLVACWDRTHDTSSG
LALQDLIEKVMVMRQSMEACGTREAATGQALADKLAHYAGLLAAQGSLAAAMSYLPESAT
ESQVVALRDRLYHAQQEVAGAQAAPPFPYTRAELTKPQQKQQQQYVQPGVQQPQQQQLQQ
QQLQQQQLQQQPQHHHHQQQHQPQPAMKHHYHPQVQPSGQGYAGHLAPHAGPGMPGMQAG
PGVASVAPNPPGPGLFTPISAPLPAVGPMQPPPLSSAVGPGAGPNAYSRAAGPNQAYPPH
PTITGFQQPMQQQPLPAPMPGPSPHGVPHFPGPSYHPAPAPAPPLGPQSSYPSAVPSDPH
GGGAMHAHHLPVGAAPGAVAGPQQHGFPGHPGQIFTPGAPYSSMAPVPPPAAAAAAATLQ
HAAGVQDGWNDPPPCVRQGGRRNKLPENYVPPAPITAPVFGVAPLEPQGGAAQASHAHEP
SQGPPGAPTEASVQPLQSLPAEKIVKKPIPEEHGVLKVVFDGLVQRCLSASTDPQTKRKL
DDATKRLEYLYDKLREQTLSPHILAGLHEIARRVEARDYPQGLAVHTQVVSSSNFSEISA
FMPVLKVVVTIAGKLNI
NT seq 3834 nt   +upstreamnt  +downstreamnt
atgaagctgaaggagatagacaggacggccaaccaggcgtggagccctgcggcccagcac
cccatctacctggccacaggaacctcggcgcagcagctcgacgccactttcagcaccaat
gcggctctcgaggtctttgagctggacctggcggactcctccacggatcttaagctgcgc
gggacgctcaccacggagaacaggtaccacaagctggtgtggggggcacccctgccaggc
gaggagggcgccggcgtggtggtgggcggcagcgacaacggtgtgctcatcctctacgcg
gccgacaaggtgctgagcggcgacgccgacgcaatcatcggggagaacgaccggcacacg
gggcccgtgcgcgccctcgacttcaaccccttccaggccaaccttctggcctctggtgca
aatgactcggaaatctacatctgggacctcaacaactttggcactcccatgacccctggc
tcaaagtcacagatgcgagagccggccgaggatgtggtgtgcgtggcgtggaaccggcag
gtgcagcacatcctggcgtcggccagccccagcggcaaggcggtggtatgggacctgcgt
aagaacgagcccatcatcaaagtcagcgaccacagcaaccgcatgcgctgctcgggcatg
gcgtggcacccggacgtggcgacgcaactcgtggtgtcgtccgaggacgaccgcatgccg
gtcatccaaatgtgggacctgcgcttcgccacgtcgcccctcaaggtgctcgagagtcac
tccaggggaattctggccatcgcctggtgccaggcggacccggagctgctgctcagctgt
gccaaagacaaccggatcctgtgctggaaccccaacaccggcgaggtggtgtacgagctg
cccaccagcacgcaatggtgcttcgacatccagtggtgtccgcgcaaccccgccctgctg
tcggccgcctccttcgacggccgcatcggcatctactcggtgatgggtggcagcatggcc
gcccagacacagagccaggcagacaagatctcgtcgtcgtttgggaacctggatccgttt
ggcacggggcaaccgctgccgccgctgcagctgccaccgcagtctccgacaacgcagagc
accttcatcccgccgctcaagaggcccccgcgttggatccgccgccctgtgggtgcctgc
ttcgcctttgggggaaagcttgtcacgttcggcagcgagaaggcagctccggccgggagc
gtggctgggccgcggcaggtgtttgtcagccaggtggtgaccgagacggctctgctgcgc
cgctccgacgagctgcagggggcgctgcgctccggccgctgcctcgactactgcgtggcg
cgtgccgccgcagcacacaacgactttgagaggagcgtctggaatttcctcaaggttaat
tttgagcaggagccacgcacgcactgcctgaagctgctggggtacagtgcggatgagctc
gacgccaagatttcagctatcctgagagaggagacgagccctgaccctgaccagaatgca
accgaaggtagcgtcaagagcgtggacgatctggaggacgaggccctcgacaaggaggac
gaggtggagagctttcccccaggcattccagctgcgccccaagaggccactgccaccacc
accaccagcgatggctccttcaaagtctccaccacggccgacgtggacggcctcatcagt
caggcgctgctgctgggaaactttgagcgagcggtggagctgtgcctgcacgacgggcgc
atggcggacgcagtcatcctgtccatctccggcgggtctgagctgctcgccagcacccag
aagaaatactttgcgcgcagccagaacaagatctctcggctggtgtctgcggtggtgtcg
cgcgactgggaggacattgctcgctcatgtgaccttgacaactggaaggaggccttggcc
gctctgctcacctatgccaaaccgcacgagttcccggccttgtgtgacacgctgggctcg
cgtatggagcaggaaggcgacgagacgttgtgcgcccaagcctgcctgtgctacatctgc
gccggcaatgtggagaagctggtggcgtgctgggaccgaacccacgacaccagctccggg
ctggcccttcaggacctgatcgagaaggtgatggtgatgcggcagtcgatggaggcgtgc
ggcactcgcgaggcggccacgggacaggcgctcgctgacaagctggcgcactacgcgggc
ctgctggcggcgcagggcagcctcgccgctgccatgagctacctgcccgagagtgccacc
gagagccaagtggtggcgctgcgggaccggctgtaccacgcccagcaggaggttgccggt
gcccaggcagcgccgccattcccttacacccgtgccgagctgaccaagccacagcaaaag
cagcagcagcagtatgttcagcctggggttcaacagccgcagcagcagcaactgcagcag
cagcaactgcagcagcagcaactgcagcagcagccacagcatcatcatcaccagcagcag
caccagccgcagccagctatgaaacaccactaccatccgcaggtgcaaccgtctggccaa
ggctacgctggccatttggccccacatgctggcccaggaatgccaggaatgcaggccggt
cccggcgtggcctccgtggccccaaatccgccgggcccaggcttgttcactccgatttcc
gcgccgctgccggccgtggggcccatgcagccgccaccactgtcatctgccgtggggcct
ggggcagggccgaacgcgtactcgcgtgccgccgggcccaaccaggcttacccaccacac
cccaccataaccggcttccagcagccgatgcagcagcaaccgctgccggcgccgatgccg
gggccgtcaccgcacggcgtcccccacttccccggcccgtcttaccacccggcccccgcg
ccggcgccccccctcggcccccagtcctcctacccctcggccgtgccgtcggacccccat
ggcggcggcgcgatgcacgcccaccacctgcccgtcggtgccgctcccggcgccgtggca
ggcccccagcagcacggcttccctggacacccaggccagattttcactccaggagctcct
tactctagcatggcccctgttcctcctcctgctgctgctgctgctgctgctactttgcag
catgcagcaggcgtacaggacggctggaacgatcctccgccctgcgtgaggcaaggcggc
cgccgcaacaagctgccggagaactacgtgccgccggcgcccatcactgcgcccgtgttc
ggcgtggccccgctggagccccagggtggcgctgcccaggcgtcccacgcgcacgagccg
agccagggcccgcccggggcccccactgaggcgtctgtgcagccgctgcagtcgctgcct
gcggagaagatcgtgaagaaacccatccccgaggagcacggggtgctcaaggtggtgttt
gacggcctcgtgcagcgctgcctgtccgcttccacggacccccaaacgaagaggaagctg
gacgatgcgacgaagcggctggaatacttgtacgacaaactccgagagcagacgctgtcg
ccgcacatcttggcgggcctgcacgagatagcgcggcgcgtggaggcgcgcgactaccca
cagggcctggccgtgcacacgcaggtggtgagcagcagcaacttcagcgagatctccgcc
ttcatgcccgtgctcaaggtcgtcgtgaccatcgccggcaagctcaacatttag

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