Petromyzon marinus (sea lamprey): 116951032
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Entry
116951032 CDS
T09614
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116951032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116951032
Membrane trafficking [BR:
pmrn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116951032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
116951032
NCBI-ProteinID:
XP_032825194
UniProt:
A0AAJ7TX42
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All DBs
Position
41:751247..787182
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AA seq
1206 aa
AA seq
DB search
MSAPGRELQRDNGSAHNWYPAIPQLGPYNAYPYQSQPAHSVDTNGLVFPPTSYHHHNHHP
PLSAQHPYGHHTMPPLTSGQPPGSLAPVVGQSPLPGHLTGAPRGLPPPMQHRMATPNVQA
GEPYGPRKPSQPYAAMPMSHERCPPPQLATTRGPPLEPNCYQKGPASSYGYQTHAGFFQQ
VPNVTATTPYALPPGHQAAATAAPTPRPPAAAAAAASATLRPPSSNAAAPHRSALATAAS
ASGTQQQQQQPRSEADMTTRRPLPAANFTTSAHPPRSQATPGVVPPAAPNAQNAPNAESM
GPAHSAEAAFTSHPTHLSAGYPTGMRAVSSSYCDGSGTATPLSSSSAADDDSDSDASCSS
DLQENCGYDALEDGGYSDLDATHTCLDRPPVSSAQGNPPQEYSPMKLNCQQSTYSNSPAH
IGKPAQQGGSSGLGELSARMQGLALQRSPRDTSGMPYDDTRPVDLLQERFVLPPTPTPAP
RPRIHSHLSKRNCSPEVLRSTLTNLPQSPALLAKAKLPLGLVLHPFKDLAQLPVITSSVI
VRCRSCRTYINPFVAFIDQRRWRCNICYRINDAPEEFMYNPITRSYGEPQKRPEVQNSTV
EFIAPSEYMLRPPQPAVYLFLFDVSYGAIDSGYLSMVCESLLENLDRLPGDSRTKIGFVT
FDSSVHFYQMHESLSQPHMLVVPDIDDVFIPTSEHLLVNLQDRKELVRELVRALPGRFRR
THETRSALGPALQAAHKLVAPTGGRVTVFQTQLPNLGHGALQSREDPNVRASTKNVQHLR
PGTDFYKKLALDCSGHQIAVDLFLLSGQYADLATLACVSRYSSGAVYFYPSFHRVHTPVQ
VERLEKDLQRYLTRKIGFEAVMRIRCSKGVSIHTFHGNFFVRSTDLLSLPNVNPDAGFAV
QMSIDETLTDTTLCSFQAALLYTSSKGDRRIRVHTLCLPVVNTLAEIYHGADVQAITGLL
ATMAVERSVTSSLPDARDALVNAVADSLSGFRSTVSNLQQGGLVAPRSLSLLPLYVHALL
KHTAFRLGTSTRLDERVFAMCQMKSQPLVHLMPMIHPHLYRIDNLMQQVTMNINDKSVPQ
PPILQLSSEHLNTDGAFLLDCGSVLYIWVGRNCSNRFIKDVLGFPNYISIPNTMVDLPEL
DNTTSERTRDFLSWIREPRPFHSTQHIIKDDSTNRMIFIEHLVEDRSESSMSYSEFLQHI
QRQICK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccaggacgcgagctgcagcgcgacaacggttctgcacataactggtaccca
gccatcccacagcttggcccctacaatgcttacccctaccagtcccagcctgctcactcg
gtggacacaaacggcctggtattccctcccacgtcctaccaccaccacaaccaccaccct
cccctttccgcacagcacccctacgggcatcacaccatgccaccactgaccagtgggcag
ccaccggggagcctagctcctgtggtggggcagtcgcccctcccgggacacctcactggt
gccccaagaggccttcctcctcccatgcagcaccggatggcgacgcccaatgtgcaggca
ggggaaccgtatggaccaagaaaaccctcacagccttacgcggccatgcctatgtctcat
gaacgttgtcctcctcctcaactggcgaccacacgtggcccacccctcgagccgaattgc
taccagaaagggcccgcctcaagttatggctatcagacgcatgctgggttcttccagcaa
gtcccgaatgtgacggcaacgaccccgtacgctttgccgcccggccaccaagcggcagca
acggcggcgcccaccccacggccgccggcagcagcagcagcagcagcttcggcgaccctg
cgacccccaagcagcaatgccgctgctcctcatcgctcagcgctggcaactgctgcttct
gcctcaggaacacagcagcagcagcagcagcccaggagcgaggccgacatgaccacgaga
cgaccgctgccagcagctaacttcaccaccagcgcgcatccaccacgatcacaggctaca
ccaggcgtggtgccgccggccgcgccgaacgcgcagaacgcgccgaatgcggagtccatg
gggcccgctcactcagccgaagcagcgtttacgagtcatccgacgcacctgagcgccggc
tatcctacagggatgagagccgtcagctcatcatactgtgacggctccggcaccgctacg
cctttatcctcctcgtctgcagctgacgacgactcagattcagacgcttcctgcagcagt
gaccttcaagagaactgtggctatgatgccctggaggatggtggctattctgacttggat
gctacacacacctgcctcgatcgccccccagtgtccagcgcccaagggaatccaccacaa
gaatacagccccatgaagctcaattgccagcagtctacctactctaattcgcctgcacac
attggaaagcctgctcaacagggcggctcctccgggctgggcgagctgagcgcacgtatg
cagggtctagcgctgcagcggtctccgcgagacacctcagggatgccctacgacgacacg
cgacccgttgacctgctgcaggagcgcttcgtgctgccgcccacgcccacgcccgccccg
aggccccgcatccactcgcacctcagcaagcgcaactgcagccccgaggttctgcggtcc
acgctcacgaacctgccccagtcgccggcgctgctggccaaggccaagcttcccctgggt
ctggtgctgcatcccttcaaagatctcgcgcagctgccggtcatcacgtcgagcgtcatc
gtgcggtgccgctcgtgcagaacgtacatcaacccattcgtcgcgttcatcgatcagcgg
cgatggcggtgcaacatctgctacaggatcaacgacgctcccgaggagttcatgtacaac
ccgataacgcgcagctacggggagccgcagaaacggcccgaagtgcaaaactccaccgtc
gaattcatcgctccctctgagtacatgctgcggccgccacagccggccgtctacctgttc
ctcttcgacgtatcgtatggcgccatcgactcgggatacctctccatggtctgcgagtct
ctgcttgaaaacctggacaggctgcctggagattcccgtaccaagatcggcttcgtcact
tttgacagcagcgttcacttctaccagatgcacgagagcctctcgcagccgcacatgctg
gtcgttcccgacatcgacgatgtgttcatcccaacgtcagaacatctgcttgtcaatctg
caggacaggaaggagctggtgcgggagctggtgcgagcgctgcccgggcggttccggcgc
acgcacgagactcgcagcgcgctggggcccgcgctgcaggccgcgcacaagctcgtggcg
ccgaccggcgggcgcgtcaccgtcttccaaacgcagctgcccaacctgggtcacggcgcc
ctccagtcacgcgaggaccccaacgtgcgcgccagcaccaagaatgtgcagcacctgcga
cctggaacggatttctacaagaagctggccctggactgctccggtcatcagattgctgtg
gaccttttcctgctcagtggacagtatgcagacctggctaccttagcgtgcgtctcaagg
tactcgtcgggcgcggtgtacttctacccgtcgttccaccgcgtgcacacgcctgtgcag
gtggaacggctggagaaggacctgcagcgatacctcacacgcaagatcggcttcgaggcc
gtcatgaggatacgctgcagcaaaggggtgtctatccacacgttccacgggaacttcttc
gtgcgctccaccgacctcctgtcgctgcccaacgtcaacccggatgctggcttcgccgta
cagatgtccatcgacgagaccctgacggacacgacgctctgctccttccaggccgcgctg
ctctacacatccagcaaaggcgatcgtcgaatccgggtgcacacgctgtgcctgcctgta
gtaaacactctggccgagatctaccacggagcagacgttcaggccatcacgggcctgctc
gccaccatggcggtggagcggtcggtgacgtccagcctgcccgacgcgcgagacgccctg
gtgaacgccgtggccgactccctgtccggcttccgctccacggtctccaacctgcagcag
ggcggcctcgtcgcgccgcgctcgctcagcctgctgccgctctacgtgcacgccctgctc
aaacacacggcgttccggctcggcacgagcacgcgcctggacgagcgggtgttcgccatg
tgccagatgaagagccagccgctcgtgcacctcatgcctatgatccacccacacctgtac
cgcatcgacaacctcatgcagcaggtaaccatgaacatcaacgacaagagcgtcccacag
cctcccatcctccagctgtcgtctgagcacctcaacacggacggggccttcctcctcgac
tgcggcagcgtgctgtacatttgggtcgggaggaactgcagcaaccgattcatcaaggac
gtccttggttttcccaactacatctccattccgaacacaatggtcgatttgcccgaactg
gacaacaccacgtcagagagaacgagagacttcttgtcgtggattcgagagccaaggccc
ttccattccacgcagcacatcatcaaggacgacagcaccaacaggatgatcttcatcgag
catcttgtggaagacaggtccgagtcttcgatgtcatactccgagttcctgcagcacata
cagcgacagatctgcaagtag
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integrated database retrieval system
