KEGG   Petromyzon marinus (sea lamprey): 116951041
Entry
116951041         CDS       T09614                                 
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmrn03009]
    116951041 (RRP12)
Ribosome biogenesis [BR:pmrn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    116951041 (RRP12)
  Pre-60S particles
   Other pre-60S particles
    116951041 (RRP12)
SSDB
Motif
Pfam: RRP12_HEAT DUF6031 MMS19_C
Other DBs
NCBI-GeneID: 116951041
NCBI-ProteinID: XP_032825258
UniProt: A0AAJ7TYY1
LinkDB
Position
41:complement(7205290..7238216)
AA seq 1314 aa
MARHGKLKAGVSSKVPRWKKGQSSSSNPATSRHRDAARSRFYGRSKGKSDLTVASLRLHD
DIQSDPTTSAGPASERTPTVGPAQDAASERTAGTFLSGLSDITNATFGRVQRYWQSSSAA
HKEICAVLAAVTEVIRSKGGTETETEYFAAFMTALETIESEESLAAVAYLLNMVIKRVPS
SVLKKKFSDISKVFVDLMSTHTNSATSTVLRWILSCTAVLLRKQDLSVWADASTMNTFHA
LLSFATHTKPKVRRAGQQAVSAVIRGSEFMFADEAPPHHPAAPSTAKFCVREIEENGGTG
DATATLHVLGLLKEVVPCLPTQSLKACCESVLRMLALGHVLVTARGMQALHALFAAQPKQ
HTLPAELNAQLITALYDYLPSMNDVQPMLAWLAVMESAHVNLARLNGKLCLSHLPRLVNS
SMNCMLSDRSEVAVAAAQAIKTVLEKCVAPQVEDLGVLLKGAAPGQNTPVLKMFRAVEDG
LKYRYHAAWKLVLQLLQTFFRVLGRQCHPIMSKCLVTLGELRASGHFAHVSELDEAIGAA
VESMGPCVLLQALPLGITGTEETPDLSHSWLLPVMRDHIRNTEIHFFTSYFLPLAATFKS
RALELRSTGKNLQAKLFDTLQWQVWSLLPGFFTNPVDLVPAFRGVARVLGTALTERPDLR
MLVCQALRTLVGKGCSSDDERAEVGRFSKNFLPIFFNIYTEGDSSQGAPDGARLAVLETV
KSFLSITDEQLICSFFEKASDKFQNPQTEHAVRLLVMDLVVVMTPFVDEAHLANIYATVL
PHLQSRDVGMQKKAYRVVQEACAGERPACQNFVLGHLASLQEALLTSLRSTASPAKRPRL
KCLALVVKQLSADREDFLTAIIPEVILCTKEVAVSARTSSLNLLAEIGHAFLRFQPDDKP
EALRRYLALVYAGLAGSVTMISCTVLALTRILFEFKDHLEGSVLSQLLSNVVLLLSSHTR
DVVKSALGFLKVVIFVTDVRTLAQHVQLIVEGIVNWRDDSRRHFRAKVKNIFTKLVRKFG
YEMIDSMVPETYHKVLVNIRKAEERARKNRALGHAGGDDDDDDQDDGDADDAKSRRSSVR
DNVDQLLADSDSEPEGGKGEESAGRGGKKAPKAAKAWLQEGEGDEPLDFLDPSVAQRVLA
TKPEQNQRSHVKHDFKFSSDGRLIIRDEEEEEEKMKKKKRGQVDEDEELADMMAEVGMRK
NSSNRKRKLAAKDDDGDDGADEPRYKAGGSGIHRAVRGKKEAPGFGAAYKSKRAAGDVKR
KGKPDPYAYVPLDKGQLNRRKRAKMQGQFKGLVKATKKGAAKGKRQNTRNKKHK
NT seq 3945 nt   +upstreamnt  +downstreamnt
atggcgagacacggcaaactcaaggcgggcgtgagcagcaaagtacctcgctggaagaag
ggacagagcagcagtagcaaccccgccacgagccgacatcgcgatgccgcccgcagtcgc
ttttacggtcgcagcaaaggcaagagcgacctcaccgtggcttcgctgcgcttgcacgat
gacattcagagcgaccccacgacgtctgctggaccggcgagcgagcggacgccgacagtg
gggccggcccaggatgccgccagcgagcggacggctggaaccttcctgagcggcctctcc
gacatcaccaacgccacgtttggccgcgtgcaacgctactggcagtccagctcggcagcg
cacaaggagatctgtgctgtgttggctgccgttacggaagtgattcgctcaaagggaggc
accgagaccgagacagagtactttgcggcatttatgaccgctctggagacgatcgagagc
gaagaatccttggcagctgtcgcttatctcctcaacatggtcatcaagagagtcccttcc
tcggtgctgaagaagaagttctccgacatctccaaggtgtttgtcgacctcatgtcgact
cacaccaactcggcaaccagcactgtgctccgctggattttgtcatgcacggccgtgctg
ctaaggaagcaggacctctccgtctgggccgatgcctccactatgaacacgttccacgcc
ctactcagcttcgcgacgcacaccaagcccaaggtgcggcgggctggccagcaggctgtg
agcgctgtgatcaggggctcggagttcatgttcgcagatgaagctcctccccaccaccca
gccgctccaagcaccgccaagttctgcgtgcgcgagatcgaggagaacggcgggacgggc
gacgcgacagccacgcttcacgtgctaggcctgctgaaggaggtggtgccctgcctgccc
acgcagagcctcaaggcgtgctgcgagagcgtgctgcgcatgctcgcgttgggccacgtg
ctggtgactgcacgcggcatgcaggcgttgcacgcgctgttcgcagcgcagcccaagcag
cacacgcttcccgcggagctcaacgcacagctcatcacggctctgtacgattacctgcca
agcatgaatgacgtgcagcccatgctggcctggctggctgtgatggagagtgcacacgtc
aatctggctcggctgaatggcaagctgtgcctgagccatctcccccgactggtcaacagc
tccatgaactgcatgctgtctgaccggtcagaggtcgctgtggcagctgcccaggctatc
aagacggtgctggagaagtgcgtggctccgcaagtcgaggacctgggcgtgctgctgaag
ggagctgctcctgggcagaacacacctgtgctaaagatgttccgggcggtggaggatggg
ctcaagtaccgctaccacgcggcctggaagcttgtgctgcagctgcttcagacgttcttc
cgcgtgctcggccggcagtgccaccccatcatgagcaagtgcctggtgacgctgggcgag
ctgcgtgcaagcggacactttgctcatgtctctgagctggatgaggccatcggggcagca
gtggagagcatgggtccctgcgtgctgctccaagcgctgccgctgggtatcacgggcacc
gaggagacaccggacttgtcacactcgtggctgctccccgtaatgcgagaccacatccgc
aacactgagattcacttcttcacttcctacttcttaccccttgctgccacgttcaagagc
agagccttggaactcaggagcactggaaagaacttgcaagccaaactgtttgatacactc
cagtggcaggtgtggtcgctgctgccaggcttcttcacgaaccccgtggacctggtgcca
gcgttccgtggtgtggcgcgcgtgctcggcacggcactcaccgagcgtcctgacctgcgc
atgctcgtgtgccaggcgctgcgtacgctcgtcggcaagggttgctcctccgacgacgag
cgagcagaggtcggccgtttctccaagaacttcctgcccatcttcttcaacatctacacg
gagggcgactcctcgcagggggcgcccgacggcgcacgtctcgccgtgctcgagacggtc
aaaagcttcctctccatcaccgatgagcagctcatctgcagcttcttcgagaaggcgagc
gacaagttccaaaatccccagacggagcacgcggtcaggctgctggtgatggacttggtg
gtcgtgatgacgccgttcgtggatgaggctcacctggcgaacatctacgccaccgtgctg
cctcacctgcagagccgagacgtgggcatgcagaagaaggcgtaccgcgtggtgcaggag
gcgtgcgcaggcgaacgtcccgcgtgccagaactttgtgctcggccacctcgcgtccctg
caggaggcgctgctcacctccctgcgctccaccgcctcccctgccaagcggccccgcttg
aagtgcctggccctggtggtgaaacagctctcggccgatcgggaggacttcctgacggcc
atcatccccgaggtcatcctgtgcaccaaggaggtggcggtgagcgcccgcaccagctcc
ctgaacttgcttgccgagataggccacgctttcctgcgcttccagcccgacgacaaacca
gaggctctgcggcgctacctggccctcgtctacgccggccttgctggctccgtcaccatg
atcagctgcaccgtgctcgccctgacgcgcatcctcttcgagttcaaagaccacctggag
ggcagcgtgctgtctcagctgctgtccaacgtggtactgctgctgtcgtcacacacgcgt
gacgtcgtcaagtcggcactcgggttcctcaaggtcgtcatctttgtgacggacgtgcgc
acgctggcacagcacgtgcagctcatcgtggagggcattgttaattggcgagacgacagc
aggagacatttccgcgccaaggtcaagaacatcttcacaaaactcgttcgcaagttcggc
tacgagatgatcgacagcatggtgccggagacgtaccacaaggtgctcgtcaacatccgc
aaggcagaggaacgagcgcgcaagaaccgtgctctggggcacgccggcggtgacgacgat
gacgacgatcaagatgacggagatgcggacgacgctaagtccaggcgcagcagcgtccgg
gacaatgtggatcagttgctggctgacagcgactcggagccggagggtggcaagggggag
gagtctgcaggccggggcggcaagaaggccccgaaagccgcaaaggcctggctgcaggaa
ggcgagggcgacgagccccttgacttcctcgacccgagcgtggcgcagagagtcctagcc
accaaacctgagcaaaaccagcgcagtcacgtaaagcacgacttcaagttctcttctgat
ggacgtctcatcatccgagatgaggaggaagaggaggaaaagatgaagaaaaagaaaaga
ggccaagtggacgaggacgaggagctcgcggatatgatggcggaggtcggcatgcgaaag
aattcgagcaacaggaagaggaagctggcggcgaaggacgatgacggagacgatggcgct
gatgaacccagatacaaagctggtggtagtggtatccaccgtgccgtgcgtgggaagaaa
gaggctcccggatttggagccgcgtataaatccaagagagcagccggagatgtgaagagg
aagggaaaaccggatccctatgcctacgtcccgcttgacaagggacagctgaaccgaaga
aaaagagcgaagatgcagggccagttcaagggcctggtgaaggccacgaagaagggagct
gccaagggcaaaaggcagaatacgagaaacaagaaacataaataa

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