Petromyzon marinus (sea lamprey): 116951041
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Entry
116951041 CDS
T09614
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116951041 (RRP12)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
90S particles
Other 90S particles
116951041 (RRP12)
Pre-60S particles
Other pre-60S particles
116951041 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
DUF6031
MMS19_C
Motif
Other DBs
NCBI-GeneID:
116951041
NCBI-ProteinID:
XP_032825258
UniProt:
A0AAJ7TYY1
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Position
41:complement(7205290..7238216)
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AA seq
1314 aa
AA seq
DB search
MARHGKLKAGVSSKVPRWKKGQSSSSNPATSRHRDAARSRFYGRSKGKSDLTVASLRLHD
DIQSDPTTSAGPASERTPTVGPAQDAASERTAGTFLSGLSDITNATFGRVQRYWQSSSAA
HKEICAVLAAVTEVIRSKGGTETETEYFAAFMTALETIESEESLAAVAYLLNMVIKRVPS
SVLKKKFSDISKVFVDLMSTHTNSATSTVLRWILSCTAVLLRKQDLSVWADASTMNTFHA
LLSFATHTKPKVRRAGQQAVSAVIRGSEFMFADEAPPHHPAAPSTAKFCVREIEENGGTG
DATATLHVLGLLKEVVPCLPTQSLKACCESVLRMLALGHVLVTARGMQALHALFAAQPKQ
HTLPAELNAQLITALYDYLPSMNDVQPMLAWLAVMESAHVNLARLNGKLCLSHLPRLVNS
SMNCMLSDRSEVAVAAAQAIKTVLEKCVAPQVEDLGVLLKGAAPGQNTPVLKMFRAVEDG
LKYRYHAAWKLVLQLLQTFFRVLGRQCHPIMSKCLVTLGELRASGHFAHVSELDEAIGAA
VESMGPCVLLQALPLGITGTEETPDLSHSWLLPVMRDHIRNTEIHFFTSYFLPLAATFKS
RALELRSTGKNLQAKLFDTLQWQVWSLLPGFFTNPVDLVPAFRGVARVLGTALTERPDLR
MLVCQALRTLVGKGCSSDDERAEVGRFSKNFLPIFFNIYTEGDSSQGAPDGARLAVLETV
KSFLSITDEQLICSFFEKASDKFQNPQTEHAVRLLVMDLVVVMTPFVDEAHLANIYATVL
PHLQSRDVGMQKKAYRVVQEACAGERPACQNFVLGHLASLQEALLTSLRSTASPAKRPRL
KCLALVVKQLSADREDFLTAIIPEVILCTKEVAVSARTSSLNLLAEIGHAFLRFQPDDKP
EALRRYLALVYAGLAGSVTMISCTVLALTRILFEFKDHLEGSVLSQLLSNVVLLLSSHTR
DVVKSALGFLKVVIFVTDVRTLAQHVQLIVEGIVNWRDDSRRHFRAKVKNIFTKLVRKFG
YEMIDSMVPETYHKVLVNIRKAEERARKNRALGHAGGDDDDDDQDDGDADDAKSRRSSVR
DNVDQLLADSDSEPEGGKGEESAGRGGKKAPKAAKAWLQEGEGDEPLDFLDPSVAQRVLA
TKPEQNQRSHVKHDFKFSSDGRLIIRDEEEEEEKMKKKKRGQVDEDEELADMMAEVGMRK
NSSNRKRKLAAKDDDGDDGADEPRYKAGGSGIHRAVRGKKEAPGFGAAYKSKRAAGDVKR
KGKPDPYAYVPLDKGQLNRRKRAKMQGQFKGLVKATKKGAAKGKRQNTRNKKHK
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacacggcaaactcaaggcgggcgtgagcagcaaagtacctcgctggaagaag
ggacagagcagcagtagcaaccccgccacgagccgacatcgcgatgccgcccgcagtcgc
ttttacggtcgcagcaaaggcaagagcgacctcaccgtggcttcgctgcgcttgcacgat
gacattcagagcgaccccacgacgtctgctggaccggcgagcgagcggacgccgacagtg
gggccggcccaggatgccgccagcgagcggacggctggaaccttcctgagcggcctctcc
gacatcaccaacgccacgtttggccgcgtgcaacgctactggcagtccagctcggcagcg
cacaaggagatctgtgctgtgttggctgccgttacggaagtgattcgctcaaagggaggc
accgagaccgagacagagtactttgcggcatttatgaccgctctggagacgatcgagagc
gaagaatccttggcagctgtcgcttatctcctcaacatggtcatcaagagagtcccttcc
tcggtgctgaagaagaagttctccgacatctccaaggtgtttgtcgacctcatgtcgact
cacaccaactcggcaaccagcactgtgctccgctggattttgtcatgcacggccgtgctg
ctaaggaagcaggacctctccgtctgggccgatgcctccactatgaacacgttccacgcc
ctactcagcttcgcgacgcacaccaagcccaaggtgcggcgggctggccagcaggctgtg
agcgctgtgatcaggggctcggagttcatgttcgcagatgaagctcctccccaccaccca
gccgctccaagcaccgccaagttctgcgtgcgcgagatcgaggagaacggcgggacgggc
gacgcgacagccacgcttcacgtgctaggcctgctgaaggaggtggtgccctgcctgccc
acgcagagcctcaaggcgtgctgcgagagcgtgctgcgcatgctcgcgttgggccacgtg
ctggtgactgcacgcggcatgcaggcgttgcacgcgctgttcgcagcgcagcccaagcag
cacacgcttcccgcggagctcaacgcacagctcatcacggctctgtacgattacctgcca
agcatgaatgacgtgcagcccatgctggcctggctggctgtgatggagagtgcacacgtc
aatctggctcggctgaatggcaagctgtgcctgagccatctcccccgactggtcaacagc
tccatgaactgcatgctgtctgaccggtcagaggtcgctgtggcagctgcccaggctatc
aagacggtgctggagaagtgcgtggctccgcaagtcgaggacctgggcgtgctgctgaag
ggagctgctcctgggcagaacacacctgtgctaaagatgttccgggcggtggaggatggg
ctcaagtaccgctaccacgcggcctggaagcttgtgctgcagctgcttcagacgttcttc
cgcgtgctcggccggcagtgccaccccatcatgagcaagtgcctggtgacgctgggcgag
ctgcgtgcaagcggacactttgctcatgtctctgagctggatgaggccatcggggcagca
gtggagagcatgggtccctgcgtgctgctccaagcgctgccgctgggtatcacgggcacc
gaggagacaccggacttgtcacactcgtggctgctccccgtaatgcgagaccacatccgc
aacactgagattcacttcttcacttcctacttcttaccccttgctgccacgttcaagagc
agagccttggaactcaggagcactggaaagaacttgcaagccaaactgtttgatacactc
cagtggcaggtgtggtcgctgctgccaggcttcttcacgaaccccgtggacctggtgcca
gcgttccgtggtgtggcgcgcgtgctcggcacggcactcaccgagcgtcctgacctgcgc
atgctcgtgtgccaggcgctgcgtacgctcgtcggcaagggttgctcctccgacgacgag
cgagcagaggtcggccgtttctccaagaacttcctgcccatcttcttcaacatctacacg
gagggcgactcctcgcagggggcgcccgacggcgcacgtctcgccgtgctcgagacggtc
aaaagcttcctctccatcaccgatgagcagctcatctgcagcttcttcgagaaggcgagc
gacaagttccaaaatccccagacggagcacgcggtcaggctgctggtgatggacttggtg
gtcgtgatgacgccgttcgtggatgaggctcacctggcgaacatctacgccaccgtgctg
cctcacctgcagagccgagacgtgggcatgcagaagaaggcgtaccgcgtggtgcaggag
gcgtgcgcaggcgaacgtcccgcgtgccagaactttgtgctcggccacctcgcgtccctg
caggaggcgctgctcacctccctgcgctccaccgcctcccctgccaagcggccccgcttg
aagtgcctggccctggtggtgaaacagctctcggccgatcgggaggacttcctgacggcc
atcatccccgaggtcatcctgtgcaccaaggaggtggcggtgagcgcccgcaccagctcc
ctgaacttgcttgccgagataggccacgctttcctgcgcttccagcccgacgacaaacca
gaggctctgcggcgctacctggccctcgtctacgccggccttgctggctccgtcaccatg
atcagctgcaccgtgctcgccctgacgcgcatcctcttcgagttcaaagaccacctggag
ggcagcgtgctgtctcagctgctgtccaacgtggtactgctgctgtcgtcacacacgcgt
gacgtcgtcaagtcggcactcgggttcctcaaggtcgtcatctttgtgacggacgtgcgc
acgctggcacagcacgtgcagctcatcgtggagggcattgttaattggcgagacgacagc
aggagacatttccgcgccaaggtcaagaacatcttcacaaaactcgttcgcaagttcggc
tacgagatgatcgacagcatggtgccggagacgtaccacaaggtgctcgtcaacatccgc
aaggcagaggaacgagcgcgcaagaaccgtgctctggggcacgccggcggtgacgacgat
gacgacgatcaagatgacggagatgcggacgacgctaagtccaggcgcagcagcgtccgg
gacaatgtggatcagttgctggctgacagcgactcggagccggagggtggcaagggggag
gagtctgcaggccggggcggcaagaaggccccgaaagccgcaaaggcctggctgcaggaa
ggcgagggcgacgagccccttgacttcctcgacccgagcgtggcgcagagagtcctagcc
accaaacctgagcaaaaccagcgcagtcacgtaaagcacgacttcaagttctcttctgat
ggacgtctcatcatccgagatgaggaggaagaggaggaaaagatgaagaaaaagaaaaga
ggccaagtggacgaggacgaggagctcgcggatatgatggcggaggtcggcatgcgaaag
aattcgagcaacaggaagaggaagctggcggcgaaggacgatgacggagacgatggcgct
gatgaacccagatacaaagctggtggtagtggtatccaccgtgccgtgcgtgggaagaaa
gaggctcccggatttggagccgcgtataaatccaagagagcagccggagatgtgaagagg
aagggaaaaccggatccctatgcctacgtcccgcttgacaagggacagctgaaccgaaga
aaaagagcgaagatgcagggccagttcaagggcctggtgaaggccacgaagaagggagct
gccaagggcaaaaggcagaatacgagaaacaagaaacataaataa
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