Petromyzon marinus (sea lamprey): 116951115
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Entry
116951115 CDS
T09614
Name
(RefSeq) contactin-4-like
KO
K06762
contactin 4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116951115
Cell adhesion molecules [BR:
pmrn04515
]
Immunoglobulin superfamily
Contactins
116951115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Sp38
C2-set_2
Pur_ac_phosph_N
Izumo-Ig
fn3_2
Motif
Other DBs
NCBI-GeneID:
116951115
NCBI-ProteinID:
XP_032825419
EnsemblRapid:
ENSPMAG00000004631
LinkDB
All DBs
Position
42:complement(7593466..7742348)
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AA seq
1033 aa
AA seq
DB search
MMPQTELPFLLAFISQLVAQDNRQHGPVFVEEPSDVMYSVESTERKVVFSCQAQGNPSPT
YRWMRNGTEVSVGGRYGVVSGGLVISHPAEGKDAGTYYCLASNAVGTVRSREASLQFAYL
ESFRTKHRGTVAVRQGQGVVLICAPPPHSAELAFDWVFNDFPITVQSDGRRFVSQATGNL
YIAKVENSDVGSYTCAVTNVVTSTRALSPATPLVLKSGGIMGEYEPRIEVSFPSKTHVLR
GDMARLECFALGNPVPRISWRKIDGDLPTKVVLSKSNAVLELPNVQPEDTGSYECKAANS
AGRNTAQGKITVYAPPQWLEPISDVEQGLGDTLQWECKATGKPQPAYKWMKDGVLVGAEG
RVRVLESGDLIVGNVKPSDRGMFQCVAENKHGRIYSSAELRVRASLPDFKNNPVPRITPA
ARGGQAVIKCEPRAWPKPTFSWTKGNALVRLGERISILDNGSLWIERVLEGDEGGYTCTA
ENQLGKASSTGYLDLKESTRITVPPLPKMVTVGQSAVMPCRAAHDPSLDIMFLWSLNGQP
IELDKTSDHYHRSEVWQKQNFGDLTIKKIQLRHGGNYTCWAQTVVDQAVATAELMVRGPP
SPPEGVLADDVTDTTVVLSWSPGLNNHSPITAYKVRGRTPFTADWQDVKTDPENIAGDSE
MVMVVGLTPWMDYEFQTIATNLLGDSDPSAPSRRVRTLASAPRTPPSNIGGGGGHAHELV
ITWTPVERTHRYGPDFGYIVAFRENGTMPWRKVTIPLAESFRYIYRNESTKPYTAFQVQI
RAYNMNGESAFSDITIVHSAENEPNVPPSSVTARSLSSKEVEVMWRPVPLNASLERVQGY
EIVFWKSGEREDMAERIRVAGSDTAARISGLKCNTQYEVAARAYNSAGVGPPSEVTTVTT
KKSPPSRPPSGLQLRRDGGKVTLDWENVVAREDESAVTGYRITYHSLEGTAQKEIVTNQT
YVELTFPDSETYVIQVRAHSEDGEGPASPQLRIRTNPDANADNSSTSKRGPSLPAHVLFI
ILAIVLATQGPLP
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgatgccacagactgaactccctttcctgctggccttcattagtcaacttgtagcccag
gacaaccggcagcatgggccggtgttcgtggaagagcccagcgacgtgatgtattcggtg
gaatcaacggaaaggaaggtggtcttcagctgccaggcacaggggaacccttcccccacg
tacaggtggatgagaaacggcacggaggtgtctgtggggggtcgctacggcgtcgtgagc
ggggggctcgtgatctcgcacccggccgaagggaaagacgccggcacctactactgcctc
gcctccaatgccgtggggaccgtgcggagcagagaggcttccctgcagtttgcttatctg
gagagctttcgcaccaagcatcgcggtacggtggccgtgcgacaaggccagggagtggtg
ctcatctgtgcccctccgccgcactctgcagagctcgctttcgactgggtattcaacgac
ttcccgatcaccgtgcagtcagacggacgccgcttcgtgtcgcaggccacggggaacctg
tacatcgccaaggtggagaactcggacgtcggcagctacacgtgcgccgtaaccaacgtg
gtgacgagcacgcgagcgctgagcccggccacaccgctcgtcctcaagtccggtggaatc
atgggtgagtatgagccccggatcgaggtcagcttcccttcgaagacgcacgtcttgaga
ggggatatggctcgcctggaatgcttcgccctcggaaaccccgttccccggatatcctgg
agaaagatcgacggagatctgcccaccaaggtcgtgctgtccaagtcgaacgctgtcctt
gaactcccgaacgttcagccagaggacactggctcctacgagtgcaaggcggcgaactcc
gccggaaggaacacggctcaaggcaagataaccgtctacgctcctccacaatggcttgag
ccaattagcgatgtggagcaaggcctgggagacacgctgcagtgggaatgcaaggccaca
ggcaaaccgcagcctgcatacaagtggatgaaagatggggtgcttgtgggcgcagaggga
agggtgcgcgtcttggaaagcggcgatctcatcgtcggcaacgtgaagccgtcggacaga
ggaatgttccagtgcgtcgcagagaataaacacggacgcatttactccagcgccgaacta
agggtcagagcgtcgctgccagatttcaaaaacaatcccgtgcccagaatcactccggcg
gctcggggcggacaggctgttattaagtgcgagccaagagcgtggcccaagcccaccttc
tcgtggaccaaaggaaacgctctcgtccgcctcggagaaaggataagcatactggacaat
ggaagcctctggatcgagagagtcctggagggtgacgaaggtggatacacgtgcacagct
gaaaaccaacttggaaaagccagcagcaccggctacctggatctgaaagagtcgacacgg
atcacggtgccgccgctccccaaaatggtgacggtgggacagagcgcggtgatgccctgc
agagccgctcacgacccttcgcttgacatcatgttcctctggtcactcaacgggcagccc
attgaactggacaagacgagcgaccactatcaccgctccgaagtgtggcagaagcagaat
ttcggtgacctgacgataaagaagatccagctgaggcacggcggtaattacacgtgctgg
gcgcaaacggtcgtggaccaggccgtggcgacagcggagctaatggtgcgaggtcctcca
agccctccagaaggggtgctcgctgacgatgtgaccgacacaactgtcgtgctgtcctgg
agccccgggctaaacaaccacagccccatcactgcctataaagtgcgcggccgaacgccc
tttactgctgattggcaagacgtcaagacggatccagaaaatatcgcaggcgactcagaa
atggtgatggtggtgggactgacgccctggatggattacgaattccagacaatcgccacc
aatctcctgggagacagcgaccccagcgcgccatccaggcgcgtccggacgttggcatct
gcccccagaacacctccaagtaacatcggcggcggtggtggacacgctcatgagcttgtt
atcacgtggacgcccgtggagagaacgcatcgctacgggcccgattttggctacatcgtg
gccttcagggagaacgggacgatgccctggaggaaagtcaccattccgctggccgagtcc
ttccgatacatataccgcaacgagagcaccaagccgtacacggccttccaggtccagatc
agggcgtacaacatgaacggagagagcgccttcagcgacatcaccatcgtgcactcagcg
gaaaacgaacctaacgtgcctccgtcaagcgtgactgcaaggagcctgtcatccaaggaa
gtagaggtgatgtggagaccagttccactcaatgcaagcttggaacgtgtgcaaggatat
gaaatcgtgttctggaaaagtggcgagagggaggacatggcggagaggatcagggtggcc
ggctcggacacggctgctcgcatctcggggctcaagtgcaacacgcaatacgaggttgcg
gcgcgcgcctacaacagcgcaggggtcggacccccgagtgaagtaacgacggtcaccacc
aagaaatcaccacccagccgaccgccatctggccttcagttacgtcgcgacggtggaaaa
gtgaccctcgactgggagaacgtcgtcgcgagagaagatgagtctgcggttacgggatac
aggatcacgtatcactcgctcgaagggaccgcgcagaaggagatcgtgacaaaccagacg
tatgtggagctgaccttccctgacagcgaaacgtacgtcatccaagtgagggcccacagc
gaggacggagagggccccgccagtccccagcttcgtatccggactaaccccgacgcaaac
gcggacaactctagcacatcgaagagaggcccgtcattgccggcgcacgtcttgttcatt
atcctggctatcgtcctcgcgacacagggtcctctcccgtga
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