Petromyzon marinus (sea lamprey): 116951175
Help
Entry
116951175 CDS
T09614
Name
(RefSeq) transcription factor SOX-4-like
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116951175
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116951175
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116951175
NCBI-ProteinID:
XP_032825541
EnsemblRapid:
ENSPMAG00000037174
LinkDB
All DBs
Position
3:1433741..1437849
Genome browser
AA seq
383 aa
AA seq
DB search
MVQQAGGRSIMDRPEHAAASRSDSEAEGSDPGSVAPGPLVGVLGTESGAPGPGWCKTASG
HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGRRWKQLKESEKVPFIREAERLRL
KHMADYPDYKYRPRKKAKLAQQQQQQGSPKGTPAGRSSSSKKSSGKVKAQQQQPKMGSSL
LKEAAGGRVRVAKRSPKGAAGERGKASASASSASSHAAAGAAVPSSPTLSIPGEAVDRLS
FYEECGVPEGPAAAAAAATVGGSSSNLSSAIIKRVTSPPLSTTSSSSSRSLSTSTVSSSS
CSSDEDDMFDLELELGSSPASPSSVDLILGSLGALDREADALSTGSSGGGSHFEFPDYCT
PEVSEMISGEWMESSIANLVFTC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaggcgggcggccggagcatcatggatcgccccgagcatgcggcggcttcg
cgctccgactccgaagccgagggctcggaccccggctccgtggccccggggccgctggtg
ggggtcctcgggacggagagcggcgcgccgggccccgggtggtgcaagacggcgagcggg
cacatcaagcggccaatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatc
atggagcagtcgcccgacatgcacaacgcggagatctccaagcggctgggccgccgctgg
aagcagctgaaggagagcgagaaggtgcccttcatccgagaggcggagcgcttgcgcctc
aagcacatggccgactacccggactacaagtaccggccgcgcaagaaagccaagctcgcc
cagcagcagcagcagcagggcagccccaagggcacccccgcgggcaggagctccagcagc
aagaagagcagcggcaaggtgaaggcacagcagcagcagccaaagatgggctcctcgctg
ctgaaggaggcggcgggaggcagagtgagggtggccaagcggagccccaagggcgcggcg
ggcgagcggggcaaggcgagcgcctccgcctcctccgcctcgtctcacgccgccgccggc
gccgccgtgccctcgagcccgaccctcagcatccccggcgaggctgtggatcgcctcagc
ttctacgaggagtgtggagtcccagagggtcccgccgctgctgctgccgccgccaccgtc
ggcggcagcagcagcaacttgagttcagccatcatcaagagggtcacctccccgccttta
tccaccacgtcgtcgtcgtcgtcgaggtccttgtccacctccacggtgtcgtcttcgtct
tgctccagcgacgaggacgacatgttcgacctggagctggagctgggctcgtcgcccgcc
tccccgtccagcgtggatctcatcctgggcagcctgggcgcgctcgaccgcgaggcggac
gcgctgagcacgggcagctccggggggggctcccacttcgagttcccagactactgcacg
cccgaggtgagcgagatgatctccggggagtggatggaatcgagcatcgccaacctcgtg
ttcacctgctga
DBGET
integrated database retrieval system