Petromyzon marinus (sea lamprey): 116951267
Help
Entry
116951267 CDS
T09614
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116951267 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116951267 (XPC)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116951267 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
116951267
NCBI-ProteinID:
XP_032825668
UniProt:
A0AAJ7XA42
LinkDB
All DBs
Position
42:10945768..10966741
Genome browser
AA seq
1006 aa
AA seq
DB search
MAKRKADSGTRGSRARGCNNADGPAQERASKRISRKARGRRGGARGGRVEPADNGEARDS
VATTSQRGAAEGGPATKGEACGASKERAASRDEGQREPARAVERVTAEGSGRKRAASESD
SEENDLEGKSDEEDSSSDSESEGEWQEVDELPAEEEVGATSSAAGIVSIGQAVQIEIETP
EMAKLRARKEKRKKLFEGWVRRMANRYKKEVQLDLHKVHLLCLLANGMHRSAVCSSPALR
ALALSLLPTQLASSPSTNHDLTFLARLLTWFNFTFRVDEEEEVQGGTAQGALMTEVLTAR
FSSRTARSAEELSHLFLVVVRALGITSRLVLSLQPLPLKSAAAEPKVGRFAQTKTRKGIS
KQQKSTRQGPGDFVGDGEDEKTRGGGDGSAKVERGKRGEARKKSSSATSQSGDVSKAERF
KEEGKGEKVEEEEDGEIRKCQGAGENEGKRRSPRVSAQQSSKPQAGRYRVAASDSDGSGS
DEDSEFSPNSGDSSDEVSDSDKGGGRRSGKSRKRPSSQQRGAAGKRPTGEKEPELGGDSD
SDDFVATTTTGLGKHKRAKMQRKSPSHPKAAWKPGATSTALAPCNAWVEVLLVAEGPHGR
APVGAAAAGGRWVCVEVAGAEADRPEACVRRAARPLAYVVAFDDDGCMKDITRRYDPAWL
TSTRRLRVDAEWWQAALFPFESPHTHREQQEDEQLEAGLLSRPMPSSVSEFKSHPLYALP
RHLLKYEAIFPPGAAVLGTCRGEPVYARECVHTLHSCDTWLKQARVVRLGEVPYKMVKGQ
SNRSRKLRMADPESRDKPDLALFGLWQTEEYQPPVAVDGKVPRNDYGNVYLFRPSMLPVG
CVHLHAPGLNRVARSIGVDCAPAVTGFDFHAGYSHPVTDGFVVCEEVKDTLLAAWERAQE
EVEKKEREKRENRAFGNWKLLTRGLLIRERLKLRYSANEPGSTQTTQGEEGTSQVAKNPG
VTPADDLAVAWPDFKERTRSSVKRNQGVGRRDRQGQNSHLFPFEKL
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagaaaggcggacagtggcacgcgtggcagcagggcccgcggctgcaacaat
gctgacggtcccgcgcaggagcgggcgagcaagaggatctcgcgcaaagcgaggggccga
cgcggcggagcgcgagggggccgcgttgagcccgccgataatggagaggcccgagactcg
gtggcgaccacgagccaacggggagcagcggagggcggcccggcgaccaagggcgaggcg
tgcggcgcgtcgaaggagagggcagcctctcgggacgaggggcagcgcgagccggcaagg
gccgtcgaacgcgtgacggcagagggctcgggcaggaaaagagccgcgagtgagagcgac
agcgaggagaatgacctggaaggaaagtccgacgaagaggactcctcgtccgactcggag
agtgaaggagagtggcaggaagtggacgagcttccggcagaagaagaggtgggcgccaca
agctcagcagccggcatcgtgagcatcgggcaggccgtgcagattgagatagagacaccg
gagatggcaaaactgcgtgcgcgcaaagagaagcgcaaaaagctgtttgagggctgggtg
cgccgcatggcgaatcgctacaagaaggaagtgcagctcgacttgcacaaggtgcacctg
ctgtgcctgctggcaaacgggatgcaccgcagcgccgtctgcagttcccccgccctgcga
gcgctggcgctgtcgctgctgcccacgcagttggcgtcttcaccatccaccaatcacgac
ctcaccttcctcgctcgactcctcacgtggttcaacttcacgttccgggtggacgaggag
gaggaggtgcagggagggacggcgcagggggccctgatgacggaggtcctcaccgcgagg
ttcagttcgcgaacggcacgctcggctgaggagctatcgcatttgttcctggtcgtggtg
cgagcgctgggcatcacctcgcgcctggtgctgtccctgcagccgctgccgctcaagagc
gccgccgccgaacccaaggttggcaggtttgcccaaaccaagacacgcaagggaatctcg
aaacagcaaaaatccactcgccaggggcccggcgacttcgtaggcgatggtgaggacgag
aagacgcggggcggtggtgatggaagtgcgaaggtggagcgagggaagcgtggagaggct
cggaagaagtcctcctccgccacctcccagagtggagacgtctccaaggcggagaggttt
aaggaggaagggaagggcgagaaggtggaggaagaggaggatggcgagattagaaagtgt
caaggtgctggagagaacgagggaaagagacggtctccgagagtatccgcccaacaaagc
tcgaagccgcaagcagggcgctaccgagtcgcggcgagcgacagcgatggcagcggcagt
gacgaggactcggaattctccccgaactccggtgactcatccgacgaggtctcagattca
gacaagggtggagggaggaggtcagggaagtcgaggaagaggccatcctcgcagcagcgt
ggagcggccgggaagaggcctacgggagagaaggagccggagcttgggggcgacagcgac
agcgatgattttgtcgccaccacgacgaccggactcgggaaacacaagcgtgccaagatg
cagagaaagtcaccgagccatcctaaagctgcgtggaagcctggggcaacgtcgacggcg
ttggccccttgcaacgcgtgggtggaggttctcttggtggccgagggcccgcacggacgg
gcgccggtaggtgccgctgccgccggcgggcgctgggtgtgcgtggaggtcgccggcgcg
gaggccgaccggccggaggcgtgcgtgcgacgggccgcacggcccctggcgtacgttgtg
gccttcgatgacgatgggtgcatgaaggacatcactcgcaggtacgaccccgcttggctc
acgtccacgcggcggctgcgcgtggacgccgagtggtggcaggcggcgctcttcccgttc
gagagcccccacacgcaccgcgagcagcaggaggacgagcagttagaggcggggctgctg
agccgccctatgccaagctccgtgtcggaatttaagagccatccgctgtacgcgctgcca
cgccacctgctcaagtacgaggccatcttcccgcccggtgccgcggtgctgggcacctgc
cgcggagaaccggtctacgccagggagtgcgtccacaccctgcattcgtgcgacacgtgg
ctcaagcaggcgcgcgtggtgcggctgggagaggtcccctataagatggtgaagggtcag
tccaaccgctcgcgcaagctgcgcatggcggacccggagagccgcgacaaacctgacctg
gcgctgtttggcctgtggcaaaccgaagaataccagccacccgtggcggtggacggcaag
gttccccggaatgactatggcaacgtgtacctgttccggccgagcatgctgccggtgggc
tgcgtgcacctccacgcgccggggctgaaccgtgtggcgcggtcaatcggcgtggactgc
gcacccgcggtcacgggattcgacttccacgcaggatactcgcaccccgtcaccgacggc
tttgtggtgtgcgaggaggtgaaggacaccctgctggccgcttgggagagagcgcaagag
gaggtggaaaagaaagagagagagaagagagagaaccgcgcttttggaaactggaagctg
ctgaccaggggactgctcatcagggagcggttaaagctgcgttactcggctaacgagccc
ggctccacacagacaacgcagggcgaggaaggcacgagccaggtggccaaaaacccgggg
gtcacccccgccgacgacctggcagtggcctggccagacttcaaagagcggacgcggtcg
tctgtgaaacgaaaccagggggtggggcggcgtgatcgccagggccagaactctcacttg
tttcccttcgagaagctctag
DBGET
integrated database retrieval system
