Petromyzon marinus (sea lamprey): 116951347
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Entry
116951347 CDS
T09614
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116951347
04020 Calcium signaling pathway
116951347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116951347
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116951347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF2630
Motif
Other DBs
NCBI-GeneID:
116951347
NCBI-ProteinID:
XP_032825766
UniProt:
A0AAJ7TZC2
LinkDB
All DBs
Position
43:complement(158264..206353)
Genome browser
AA seq
2522 aa
AA seq
DB search
MAEEAATSEQVPGPEGPQEEDVPGDASGSSPLPYPGLAPVAFFCMRQTSGPRRWCLRLVC
DPWFERASMLVILLNCATLGMFQPCAEGQCRAQRCSVLQAFDDFIFTFFAVEMILKMMAL
GIWGRAGYLGDTWNRLDFFIVLAGMLEYSLDMESVSLSAIRTIRVLRPLRAINRVPSMRI
LVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLREANATLDVDGSSLPL
SPVFRTEDESDRPFICSLPRDNGVRSCRDLPRSRLAGGPCTSGGALGEAQRSSGARNGSG
PQGPPGPYSPHSPYGHYSPYSPHGGHSAQAMVSIPENQSAAGRAICVDWSRYYSECRPGK
RNPHGGSVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMI
NLCLVVIATQFSETKQRENQLMHEQRARLGSRGSSIDSAGGYQEPGSCYQELLRYSARAC
RRLRRRALHLWGACSSACSSSRNSTSSSRPRSAMRGSCLERGGCLHVVKRRPRCSCRRHR
SSSLLHHHYQQQSHRRRHVSHHHHHHRHHHHHHNHHHRRDGGAARGTLTGGGGGGGSRRR
RTCKSVHHHMIHHHHHHHHHYHIGNGSGQQQQQSAAAAPGILQLEAGEAGAPLGPGGSSG
ALVVRGRGGRTASVHSVFHADCVRLDCPPTGTKQPLSSPTQHVVPPISYPTIIASGPPRN
EDVAKAKAAPGRGGSIAPYRGLRRFSRTYSSMCVRMCACVRWCGGGRHCTYSLGKSSAII
QRTPCPSRNYTHSMVASGLYGDRCICMHASPCMCQADRCCLDPLHSHLPGPTATTNHHHH
HHNQNHHHHNHYQASPVTTTNTTTISDPWVRAAGSRRDSGRSRGSPSLLLERELQRCPHC
PSDSSDCDCSDSDSGSDTGSGLGAEGPPDPRESRDLRRPSGHRDQDRPEEGSPRRVAGPP
ARARRWGPAGPRWARAWGTAGPRWARVSRWFRAIVESKYFTRGIMVAILINSLSMGIEYH
EQPEELTNLLEISNMVFTSIFALEMLIKLLAFGLLGYIRNQYNIFDGIIVIISVCEIVGQ
SGGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMRTMDNVATFCMLLMLFIFIFSILGMH
LFGCKFSVKTESGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYHGMASSSPWAALYF
IALMTFGNYVLFNLLVAILVEGFQAEGDASRSDSDDDVGGSAIDEEGDPAKGLPVLASNG
HADPKGVGGLAPTDAASTPSPVGEPWHHVVLDASACIVGEGISGGPGVLVGAAVLVAGPG
PRAARRSSGSRGGAGSPRRQGERRSLLSPDDGDDHEFIDAPGTASGRDEGAGAKEGAREG
AREGTARPPPSPPPPPTLLLPLASPPAVPGSAPHDLAAVRVALHRPALPLPLLMPVALHV
SLPDCNGKTPPYGSAKHAPPDPLDDIDDRWWFRLGRRLQRYRPRCCVVRADWSLYVFHPH
NRFRWVCRKIIAHKVFDHVVLLFIFLNCITIALERPDIPSYSAERVFLTVSNYIFTAAFV
TEMAIKVTALGLALGDGAYLRSSWNLLDGLLVLVSAVDIVVSLASSGGARILGILRVLRL
LRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCE
GTDTRNITSRADCARAHYRWVRRKYNFDNLGQALMSLFVLASKDGWVNIMYDGLDAVGED
LQPVRNHNPWMLLYFISFLLLVSFFVLNMFVGVVVENFHKCRQHQEAEETRLREEKRLRR
AEKRRRNGKDAGGRRAKQGAHKNPKEAQQKPYYADYSRTRMLVHGACTSSYLDLFITVVI
GLNVVTMAMEHYDQPRSLEEALKYCNYFFTTVFVLEAAFKLVAFGIRRYFKDRWNQLDLG
IVLLSIMGITLEEIEMNASLPINPTIMRIMRVLRIARVLKLLKTATGMRSLIDTVVQALP
QVGNLGLLFLLLFFIYAALGVELFGRLICDDETPCEGLTRHATFENFGMAFLTLFRVSTG
DNWNGIMKDTLRECGAGLPAEPPACVAHLPLISPVYFVTFVLTAQFVLVNVVVAVLMKHL
EESNQDDDDDDVDGDTTEGEGGPLGPERDLRRETPSPTPRGTGSRSPRRHSADTGWSQWG
QGAEGERVSLGGSPSWRPGTRLRFSSDLSLVMVDAVDAELLLMDNLSGSVCRSYGLSSTP
GPPGSPKIPLAEMEALSVTSDLSERSWSPEPQRRCSAPSPPSSSSSPSASSPPPAPSPLL
PRGPTRRPLNAGETPVARGGDLVPVANAEQGESRPASHGDSHRRTRHGAPGAPCPATATG
PPTFSVSEPSPEGACPPRPSERPDPMVTCRSSFHRQEAAETGSQENVGMRSLSSYLWGRG
SRQPTSRDPTAPPSLPPRHCCLPLRVRAGRAAVGPTGPRGTRPGPAEAAAADMEPGEEED
GGAVRAGTRGSYGRRGAAVGGSEERERHGGPRARGHLRSGATEQTVGPGSDPPCLSAPRR
PR
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaggcggctacctcggaacaggtcccgggccccgagggaccccaggaggag
gatgttcccggcgatgcctcggggtcctccccgctgccgtaccccgggttggcccccgtc
gccttcttctgcatgcggcagacgagcggcccgcgcaggtggtgtctccgcctcgtgtgc
gacccgtggttcgagcgcgccagcatgctcgtgatcctgctcaactgcgccacgctcggc
atgttccagccgtgcgccgaggggcagtgccgcgcccagcgctgcagcgtgctgcaggca
ttcgatgacttcatcttcacgttcttcgcggtggagatgatcctcaaaatgatggcgctg
gggatctggggccgcgcggggtacctgggggacacgtggaaccgcctcgacttcttcatc
gtgctggcgggcatgctggagtactcgctggacatggagagcgtcagcctctctgctatc
cgcacgatccgcgtgctgcgcccactgcgagcgatcaaccgcgtccccagcatgcgcatc
ctggtgacgctgctgctcgacacgctgcccatgctgggaaacgtgctgctcctctgcttc
ttcgtcttcttcatcttcggcatcgttggggttcagctgtgggccggcctgctgcgcaac
cgctgcttcctgcgcgaggcgaacgccaccctggacgtggacggctcctcgctaccgctc
tcgcccgtgttccgcactgaggacgagagcgatcggccattcatctgctcgctgccccgc
gacaacggcgtgcgcagctgccgcgaccttccaaggtcgcgcctcgcggggggaccttgc
acctcggggggcgccctcggcgaggcgcagcgaagcagcggggcgcggaacggttcgggg
ccgcaggggcccccgggcccgtacagcccacacagcccctatggtcactacagtccctac
agtccgcatggaggccacagcgcgcaagccatggtgtctattcctgagaaccagagcgcg
gcggggcgcgccatatgcgtggactggagccgctactacagcgagtgccgccccgggaag
aggaatccgcacggaggctctgtgaactttgacaacatcggctacgcgtggatcgccatc
ttccaggtgatcacgctggagggatgggtggacatcatgtattacgtcatggacgcgcac
tccttctacaacttcatctacttcatcctcctcatcattgtcgggtcgttcttcatgatc
aacctgtgcctcgtggtcatcgccacgcagttctccgaaaccaagcagcgtgagaaccag
ctgatgcacgagcagcgggcgcgcctcggatcgcgcggtagctccatcgacagcgcgggg
ggctatcaggagccgggcagctgctaccaggagctgctgcgctacagcgcgcgcgcctgc
cggaggctgcggcggcgcgcgctgcacctgtggggcgcctgctcctccgcctgctcctcc
tcccgcaactccacctcctcgtcgcgcccgcgctctgccatgcgtggctcctgcttggag
cgcggcggctgcctccacgtggtcaagcggcgcccgcgctgctcctgccggcggcaccgc
tcgtcctccctcctccatcaccactaccagcagcaaagccaccgccggcggcacgtcagc
caccaccaccaccatcaccgccaccaccaccatcaccacaaccaccaccaccggcgggac
ggcggcgcggcccggggcaccctcactggcggcggtggcggcggcggcagcaggaggagg
agaacgtgcaagtcggtccaccaccacatgatccaccaccaccaccatcaccaccaccac
tatcacatcggcaacggcagcggccagcagcagcagcagtcggcagcggcggcgcccggg
atcctgcagctggaggcaggagaggcgggggcccccctgggtcctggggggtctagtggg
gccttggtggtgcgtgggcgcgggggacgtaccgcctccgtgcacagcgtcttccacgcc
gactgcgtgcgcctcgactgcccccccacggggaccaagcagccgctgtcttcccccacg
caacacgtcgtgccccccatcagctacccgaccatcatcgcatcgggccccccacggaac
gaggatgtggcgaaagcaaaggcggcgccagggagggggggctccattgctccctacagg
gggctgcggcgtttctcacgcacctacagcagtatgtgtgttcgtatgtgtgcgtgtgtg
cggtggtgcggtggtggccggcactgcacttacagcctggggaaatccagcgctattatc
cagcgcacaccgtgcccctctaggaactatacccacagcatggtggcatccgggttatac
ggggatcgttgtatttgtatgcacgcgagtccgtgcatgtgccaggctgaccgctgttgt
ttagatcccctacacagccatttgccaggtccaacagcgaccactaaccaccaccatcat
catcacaatcaaaaccaccaccatcacaatcactaccaagcatcaccagtcaccaccacc
aacaccaccactataagtgacccatgggtccgcgctgcaggttcgcgccgggactcgggt
cgctcccgcgggtctccctcgcttctactggagcgggagctgcagcgctgcccgcactgc
ccgtccgacagctccgactgtgattgcagtgacagcgatagtgggagtgacacggggtcg
gggctcggggcagagggacccccggacccccgagaatcccgggacctccggcgtccgagc
ggccatcgggaccaggatcggcccgaggaggggtcacctcgccgggtggccgggcccccc
gcgcgagcgcgcaggtgggggcccgcagggcctcgctgggcgcgtgcgtggggaaccgcg
ggccctcgatgggcgcgcgtgagccgctggttccgcgcgatcgtggagagcaagtacttc
acccgtggcatcatggtggccatcctcatcaacagcctgagcatgggcatcgaataccac
gagcagcccgaggagctcacaaatctcctggagatcagcaacatggtgttcaccagcatc
tttgcgctggagatgctcatcaagctgctggcgttcgggctcctgggctacatccgcaac
cagtacaacatctttgatggcatcatcgtcattattagcgtgtgcgagatcgtggggcag
tcgggtggggggctttcggtgctgcgaacgttccgactgctgcgcgtgctcaagctggtg
cgcttcatgcccgcgctgcggcgccagctcgtggtgctcatgagaaccatggacaacgtc
gccaccttctgtatgctgctcatgctctttatcttcatattcagcatccttgggatgcat
ctcttcggctgcaagttcagcgtgaagacagagagtggggacacggtccccgaccgcaag
aacttcgactcgctcctttgggccatcgtgaccgtcttccagatcctgacgcaggaggac
tggaacgtggtgctataccacggcatggcctcctcctcaccctgggccgcgctctacttc
atcgcgctcatgacattcggaaactacgtcctcttcaacctcctcgtggccatcctggtg
gagggctttcaggccgagggagacgcgagccgctccgactcggacgacgacgtgggcggc
tcggcgatcgacgaggagggggacccagccaaagggctcccagtgttggcctcaaatggt
cacgcggaccccaaaggggtggggggtctggcccccacggacgccgcctccacgccctct
cccgtgggggagccgtggcaccatgtcgtcctcgacgcttccgcgtgcattgtcggcgaa
ggaatctcggggggccccggggttcttgtgggggcggctgtcctcgtcgcaggcccgggg
ccccgagcagcccgcaggtcgagtgggtcgcgaggaggggccgggtccccccgccgccag
ggggagcgccgctcgctgctctcgccggacgacggagacgaccacgagttcatcgacgcg
ccaggaacggcgagcggcagggacgagggcgcgggggcgaaggaaggggcgagggaggga
gcgagggaggggacggcacggccgcctccctcgccccctcccccgcccacgctgctgctg
cccttggcctcgccccccgcggtgcccggatcggcgccccacgacctcgcggcggtgcgc
gtggccctgcaccggcccgcactgccgctgcccctgctcatgcccgtggcgctgcacgtg
tctctgcccgactgcaatgggaagacacccccctatggctcggccaaacatgcgccgcca
gacccactggatgatattgacgatcgctggtggtttcggctgggccgccgcctccagcgc
taccggccgcgctgctgcgtggtgcgcgcggattggtcgctctacgtgttccacccgcac
aatcggttccgctgggtgtgccgcaagataatcgcgcacaaggtgtttgaccacgtggtg
ctgctattcatcttcctcaactgcatcaccatcgcgctggagcggcccgatatccccagc
tacagcgccgagcgcgtcttcctcactgtctccaactacatcttcaccgccgccttcgtc
accgagatggctattaaggtgacagcgctgggcctggcgctgggggatggcgcgtacctg
cgcagctcgtggaacctgctggacgggctcctggtcctcgtctccgccgtggacattgtc
gtgtccctcgcctcgtccggaggcgcgcgcatcctgggtatcctgcgcgtgctccggctc
ttgcgcaccctgcggcccctgcgagtgatcagccgcgcgccgggcctgaagctcgtggtg
gagacgctgatcacgtcattgaagccgattgggaacatcgtcctcatctgctgcgccttt
ttcatcatcttcggcatcctgggggtacagctcttcaaggggaagttctattactgcgag
gggacggacacccggaacatcacgagccgtgctgactgcgcgcgtgcgcactaccgttgg
gtgcgccgcaagtacaactttgacaacctggggcaggcgctcatgtcccttttcgtgctg
gcctctaaggatggctgggtgaacatcatgtacgatggcctggatgccgtgggtgaggat
ttgcagcccgtgcggaaccacaacccgtggatgctgctctacttcatctccttcttgctg
ctcgtcagcttcttcgtgctcaacatgttcgtgggcgttgtggtggagaacttccacaag
tgccggcagcaccaggaggctgaggagacgcggctccgcgaggagaagcgactccgccgg
gcagagaaacggaggcgcaacggaaaggacgcgggggggagacgcgctaagcagggcgct
cacaaaaaccctaaagaagcgcagcagaagccgtactacgctgactactctcgcactcgc
atgctcgtccacggcgcgtgcacgtccagctacctggacctcttcatcaccgtggtcatc
ggcctcaacgtcgtcaccatggccatggagcactacgaccagcccaggtcgctggaggag
gcgctcaagtactgcaactatttcttcacaacggtgttcgtgctggaggcggccttcaag
cttgtggcgtttggcatacgaagatacttcaaggacaggtggaaccagctggatctcggc
atcgtgctgctgtccatcatgggcatcacgctggaggagatcgagatgaatgcatcgctg
cccatcaacccgaccatcatgcgcatcatgcgcgtactgcgcatcgcccgcgtgctcaaa
ctcttgaagacagccacagggatgcgctccctcatcgacaccgtggtgcaggcgctgcca
caggtggggaacctgggcctcctcttcctgttgctctttttcatctacgcggccctgggg
gtagagctgttcggccgcctgatctgtgacgatgagaccccctgcgagggccttacccgt
cacgcgaccttcgaaaacttcggcatggccttcctcacgctgttccgcgtgtccacgggc
gacaactggaatggcatcatgaaggacacgctgcgagagtgcggggccgggctccccgcg
gaacccccggcctgcgtggcgcacctcccgctcatctcgcccgtctacttcgtgacgttc
gtgctcacagcgcagttcgtgctcgtgaacgtggtggtggccgtgctcatgaagcacctg
gaggagagcaaccaggacgatgacgatgacgatgtggatggagacaccacggagggcgag
ggggggcccctagggcccgaaagggatcttcgcagggagaccccctccccgacaccgcgg
ggaacaggaagtcggtccccccggcggcacagcgctgacaccgggtggtcccagtggggg
cagggggccgagggggaacgcgtctccctgggcgggtccccctcgtggcggccggggacc
cggctgcggttctcgtcggacctgtcgctggtgatggtggacgcagtggatgctgagttg
ctgctcatggacaacctgtcgggctccgtgtgccgctcctacggcctgagctccaccccg
ggaccgcccggctccccgaagatcccattggccgagatggaggcgctgtccgtgacctcc
gacctgtcggagcgatcatggtccccggagccgcagcgccgctgctcggcgccgtcccct
ccatcgtcatcgtcgtcgccctccgcgtcctcgccgccccctgccccctcgcccctcctt
ccccgggggcccacacggcggcctctcaacgctggagagaccccggtggcacggggaggt
gacttggtccctgtggccaacgctgagcaaggggagagtcggcccgcgagtcacggcgac
tcacatcggcgaacgcgacacggggcccctggggccccctgcccagccacagctacaggc
cctcccacattttctgtgtctgagccaagcccggagggggcgtgccccccacgtccatca
gagaggccagaccccatggtgacctgtcgttccagcttccacagacaggaggccgccgaa
acggggtcccaggagaacgtggggatgaggtccctttcttcgtatttgtggggacgcggg
tcacgccagcctacctcccgcgaccccaccgcgcccccctcgctacccccacgccactgc
tgcctcccgctaagagtccgtgccggtcgggctgccgtgggccccacgggtcccagaggg
acgcggccaggtccagcggaggctgcagctgctgacatggagcccggggaagaggaggat
ggaggcgcggttcgtgccggcaccaggggatcgtacggacggcgaggggcagcagtgggg
ggcagcgaggagagggagcggcatgggggcccgagggcccgggggcatttgagatcaggc
gccacagagcagacagtggggccggggtcagatccaccatgcctgtcggcacccaggcgg
ccgagatga
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integrated database retrieval system
