Petromyzon marinus (sea lamprey): 116951359
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Entry
116951359 CDS
T09614
Symbol
FBXL16
Name
(RefSeq) F-box/LRR-repeat protein 16
KO
K10282
F-box and leucine-rich repeat protein 16
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116951359 (FBXL16)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
116951359 (FBXL16)
BRITE hierarchy
Motif
Pfam:
LRR_6
LRR_4
LRR_8
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
116951359
NCBI-ProteinID:
XP_032825780
EnsemblRapid:
ENSPMAG00000032803
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All DBs
Position
43:complement(2604176..2622387)
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AA seq
830 aa
AA seq
DB search
MFEQEDLEAKLSCSGVGVRNGLLRIGPPQPTGPAPSPAQPTQGNGQTQGRQTAAAPPSSQ
TPAQTESQSEAPAQGPSLQGHSHVQAQPAAHGKAKDQSRNPAQGRSRLGQTLGPAQQAQT
QDPLPSQARAADKAPLLPASGEPAAKAHASVWGQGPEQPQGSRPHGLAQAEIKGQAQPQT
PSQSQGLVQAQVQSLEQQLQQQQQQQQKSSANSGHSSAQLEGPKQSNGVTATAEEAVGAP
SAASITKGTPVTRASRPCCSQSITTGVSTSSSSSSSSSPSSSPTSSPLSPAAAAAPPLSL
LSSSSSSSSSSSLAPPTPPVSSCSLSSLSPTSSSSPSSPSSLLSLSSPARGCDDSTSSPA
AAAAAVMCAAPPERRGASWPGPPGGAADGAGGGAAGAGGGMGDGPWDGEEVATGAGHGGP
ADTHALLDHRVLARLFLYFTIAERRVLAQVCRTWRRALYQPRLWEGVTPVLHCAELYRSL
EANGNGEAAPGGSGDKEFVSLLGFAARGFDSFCLVGVSDLDVCEFIDNYPLAKAGVRAMG
LRRSTITDAGLEVMLEQMQGLVKLELSGCNDFTEAGLWSSLNGRLQVLGLSDCINVADDA
LAAIARLLPDLCELSLQAYHVTDVGLAYLTARPGLHKLCCLHLHSCWEVTDRGVATLARG
LPALTHLSLSGCSKLTDEGVEMVVACPPAGVAGAAGSGLLALDLSWCPRITDAALEAIAC
ELHRLQELVLDRCVRVTDLGLGYLSTMPSLRSLNLRWCCQIQDFGLQHLYGMRSLRVLSL
AGCPLLTMAGLSGLARLASLEELELTNCPGASQELFRYLNQRLPRCVIVE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagcaggaagacctggaggccaagctctcgtgcagcggagtcggcgtgaggaat
gggctgctgaggatcgggcccccacagcccacggggcccgcgccgagcccggcgcagccg
acgcaagggaacggacagacgcagggcaggcagacggcggcggcaccaccgtcctcgcag
acgcccgcgcagaccgagagccaaagtgaggcccccgcgcagggcccgtcgctgcagggt
cactcgcacgttcaggcgcagcccgccgcacacggcaaggccaaagaccagagccggaac
ccggcacagggccggtcccgactgggtcagacgctcgggccagcccagcaggctcagacg
caagatcctcttccgagtcaggcgcgcgcggccgacaaagcgccgctcttgccggcgagc
ggcgagcccgcggcaaaggcgcacgcttcggtttggggacagggtccggagcaaccccag
ggctctcgcccgcacggcctcgcgcaggcggagataaagggccaagcgcagccccagact
ccgagccaaagccaaggcctggtgcaggcccaggtgcagagtctcgagcagcagctgcag
cagcagcagcagcagcagcagaagtcgagcgccaactcgggccactcgtcggcccagctg
gagggtccgaagcaaagcaacggcgtcaccgccaccgccgaggaggcggtgggggctccg
tcggcagcgagcatcaccaagggcacgccggtgacgcgcgcctcgcggccgtgctgctcg
cagtctatcaccacgggcgtctccacatcctcctcctcctcctcctcctcgtcgccatcg
tcctccccgacctcgtcccccctgtccccggcggcggcggcggcgccgccgctgtcgctg
ctctcctcctcgtcgtcctcgtcgtcctcgtcgtcgctggcgcccccgacgccccccgtg
tcctcgtgctccctgtcgtccctttcccccacctcctcctcgtcaccctcctccccctcc
tcgctgctgtcgctgtcctcgcccgccaggggctgcgacgactccacgtcctcgcccgcg
gcggccgccgcggcggtgatgtgcgcggcgccgcccgagcgccgcggcgcctcctggccg
gggcccccgggcggcgcggcggacggtgccggcggtggcgcggcgggcgccggcggaggg
atgggcgacgggccctgggacggggaagaggtcgcgaccggcgcgggccacggcggcccg
gccgatacgcacgcccttctcgaccaccgcgtgctggcccgcctcttcctctacttcacc
atcgccgagcgccgcgtcctggcacaggtgtgccgcacctggcgccgggcgctgtaccag
ccgcggctctgggagggcgtcacgccggtgctgcactgcgcggagctctaccgcagcctg
gaggccaacggcaacggagaggcggcaccgggcggcagcggcgacaaggagtttgtgagt
ctgctgggcttcgcggcgcgagggttcgactccttctgcctcgtcggcgtgtccgatctg
gacgtctgcgagttcatcgacaactacccgctggcgaaggccggcgtgcgcgcgatgggg
ctgcggaggtccaccatcaccgatgcggggctggaggtgatgctggagcagatgcagggc
ctcgtgaagctcgaactgtccggctgcaacgacttcacggaggccgggctctggtccagc
ctcaacggccgcctgcaggtgctgggcctcagcgactgcatcaacgttgcggacgacgcc
ctcgccgccatcgcgcgcctccttcccgacctctgcgagctgagccttcaggcgtaccac
gtgacggacgtgggcctggcctacctgacggcgcggccgggcctccacaagctctgctgc
ctgcacctccactcctgctgggaggtgacggaccggggcgtggccacgctggcacggggc
ttgccggcgctcacgcacctcagcctctccggctgctcgaagctgacggacgagggcgtc
gaaatggtggtggcgtgccccccggccggcgtggcgggcgcggcggggagcggcctgctg
gccctcgacctgtcgtggtgcccgcgcatcaccgacgccgccctcgaggccatcgcctgc
gagctgcaccgcctgcaggagctcgtgctcgacaggtgtgtccgcgtgactgaccttggc
ctaggatacctgtccaccatgccctctctgcgctccctcaacctgcgctggtgctgccag
atccaggatttcgggttgcaacacttgtatggaatgcgcagcctccgggtcctctcgttg
gcaggctgcccgctgctcaccatggccggcctctcgggcctggctcgcctggcctcgctc
gaggagctggagctcaccaactgccccggcgcgtcgcaggagctcttccgctacctgaac
caacggctgccgcgctgcgtcatcgtcgagtga
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