Petromyzon marinus (sea lamprey): 116951489
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Entry
116951489 CDS
T09614
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116951489 (VPS35L)
Membrane trafficking [BR:
pmrn04131
]
Protein recycling
Others
Retriever complex
116951489 (VPS35L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
116951489
NCBI-ProteinID:
XP_032826028
UniProt:
A0AAJ7XAG1
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Position
43:4711197..4734460
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AA seq
983 aa
AA seq
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MAAVQWHARNRDYARERERAGLEALPVEPGEYHPLKPITVTESKGRAAKAGARKGSTSSL
STSASTPSSAAPAGAAVLLDPLMSALEGSDPLTQIAMASAEPLGAVGDPNRDGEQRKRGA
STGLGSDFQSWAQKRPEILARYTTVEKLSLRLSMGADKDSGRHGAGAAVPEKVRSRLEEL
DDLEEGSQREMLNLSTQEYVGRVEEQGQALREAWATDQKVKALKIVIQCSKLLSDTSVIS
FYPSKFVLITDILDTFGRLVHDRIWAMCNEGRPPGAPALSPDSIRPELVPDSARETCLNW
FYKIASIRELVPRLYVEAAILRCSRFVKASGFEEVLPRLAAMLRGVGDPLVAMFARAYIC
RVGVEGAPHLRELLTCNFFDFLLTFKQLQSNSVQNLLATQGLDMPMYLTLYSPAVDWVLQ
CLAYRAPEAVLVEMMERCRKVGNSGLLLNSIMSAFRAEFIAARTTALIPMIKECDDSGFP
KHLLFRSLGRSLASADPPESDRLHVLNEAWKVITKLRSPQDYIGCAEAWMEYTCRHFTQR
EVNTVLADIIKHMTPDRAFEEAYPQLQSIVSRVLKYFQDFSTLFAMDKFLPFLDMFQKEL
VKVEVCKMVTEAFIKHQREETRDPVIVNALMSVCKTMHDSVNALSLDDERRVISAFTCGF
IRMISFGRDFEQQLSFYVEARATFTNLEPVLVALMHSVNRLAMETCRLVRGNHTRKTAAF
VRACAAYCFITIPSLTSVFAQLILYLLSGQVALANQCLSQADGFFKAAIALLVEVPRSVM
VDGKARPTEPMLLEFLSSFLSTLLVVPDHPEHSVLYLVRGLLNVLQDYTWEEGSDGRARA
YLSVMHLLAAASQETYLYSISKVDSNDSLYGSDPKFLGEVDRLCETILGQVLDQLKLLGK
QEQYKRQSVLALALLDTLLLQADLRNNKLNQLAVSLWGLAQKHGQADSRALARVLELVRR
QSARPELAHFAELALRMSPQGRP
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgcagtggcacgcacgaaaccgtgactacgcgcgggagcgtgagcgcgca
gggctggaggcgctgcccgtggagcctggcgagtaccacccgctcaagcccatcacggtg
accgagtcaaagggcagagcggcaaaggctggggcacgcaagggcagcacgtcttcgctg
tccacgtcggcgtccactccatcgtcagcggcgcccgccggggctgctgtgctgctggac
ccgctgatgtccgccctggagggcagcgaccccctcacacagattgccatggcgtccgct
gagcctttgggggcagtgggggaccccaacagggacggggagcagaggaagcgcggtgcc
agcacgggcttggggagcgacttccagagctgggcccagaagcggcctgagatcctggca
cgctacaccacagtcgagaagctctccctgaggctttccatgggagcagacaaggattca
gggaggcatggtgcaggagctgctgttcccgagaaggtgaggagccgcctggaggaactc
gatgacctggaggaggggtcacagagggagatgctgaacctgagcacgcaggaatacgtg
ggccgcgtggaggagcagggccaggcccttcgcgaggcctgggccactgaccagaaggtc
aaggccctgaagatcgtcatccagtgctccaaactcctctccgacaccagcgtcatcagc
ttctaccccagcaagttcgtcctcatcacggacatcctcgacaccttcggccgcctggtg
cacgaccgcatttgggccatgtgcaacgagggtcgaccgccaggtgcccctgccctctct
ccagactccatacgcccggagttggtcccggactccgcacgtgagacctgcctcaactgg
ttctacaagatcgcctccatccgcgagctggtgccgcggctctacgtggaggcggccata
ctgaggtgcagccgcttcgtcaaagcgagtggtttcgaggaggtgctcccacggctggcg
gccatgctgcgcggcgtgggcgaccctctcgtcgccatgtttgcacgcgcgtacatttgc
cgggtgggcgtggagggggcgccgcacctacgtgagctgctcacttgcaacttcttcgac
ttcctgctcaccttcaagcagctgcaaagtaacagcgtacagaacctcctggccacgcag
ggcctggacatgcccatgtacctcaccctgtactcacctgctgtcgactgggtgctgcag
tgcctggcctaccgagcgccagaggctgtgctcgtggagatgatggagagatgcagaaaa
gttggaaacagtgggctgctgctcaactccatcatgtcggcgttccgagcagagttcatc
gccgctcgcacgaccgccctcatccccatgatcaaggaatgtgacgattctggcttccct
aagcatcttttgttccggtcgctggggcgaagcctggcgtcagccgacccccccgagtcg
gaccgcctgcacgtgctcaacgaggcgtggaaagtcatcacgaagctgcgcagcccccag
gattacatcggttgcgccgaggcgtggatggaatacacctgccgtcacttcacgcaacgc
gaagtaaacaccgttttggccgacattatcaagcacatgactcctgaccgcgcgtttgag
gaggcttacccacagttgcagtccatcgtgtccagggtcttgaaatatttccaggacttc
tccacgctgttcgccatggacaagtttctgccatttctggacatgttccaaaaggagctt
gtcaaggtggaggtgtgcaagatggtaacggaggcctttatcaagcatcagcgggaggag
acgcgggaccccgtgatcgtgaatgccttgatgagcgtgtgcaagaccatgcacgactct
gtcaacgcgctctccctggacgatgagaggagagtcatctcggcgttcacttgcggcttc
atccgcatgatctcatttggccgggactttgagcagcagctgagcttctacgtggaggca
cgtgccaccttcaccaacctggagccagtgctcgtcgcgctcatgcatagtgtgaaccgc
ctggccatggagacgtgccgtctggtgcggggaaaccacacgcgcaaaacggcggcgttc
gtgcgggcatgcgccgcctactgcttcatcacgatcccgtcgctaaccagcgtgttcgcg
cagctcatcctctacctgctgtcgggacaggtggcgctcgccaatcagtgcctctcgcaa
gcggacgggtttttcaaggcggcgatcgcgctgctggtggaggtgccgcgctcggtgatg
gtggacgggaaggcacgccccacggagcccatgctgcttgagttcctctcctccttcctg
tccacgctgctcgtcgtgcccgatcaccccgagcacagcgtactgtacctggttcggggg
ctgctcaacgtgctgcaggactacacctgggaggagggcagcgatgggcgcgcacgtgcc
tacctctctgtcatgcacctgctggccgccgccagccaggagacatacctgtactccatc
agcaaggtggattcgaatgacagcctctatgggagcgaccccaagttcctgggggaggtg
gaccggctctgcgagacgatcctggggcaggtgttggaccagctgaaactgctgggcaag
caggagcaatacaagcggcagagcgtgctcgcgctggcgctgctggatacgctgctgctg
caggccgacctgcgcaacaacaagctcaaccagctcgccgtcagcctgtgggggctggcg
cagaagcacggccaagctgactcgcgtgccctggcgcgggtgctggagctggtgcggcgg
cagagcgcgcgccccgagttggctcactttgccgagctggcgctgcggatgtccccgcag
ggccggccttga
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