Petromyzon marinus (sea lamprey): 116951492
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Entry
116951492 CDS
T09614
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03440
Homologous recombination
pmrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116951492 (TOP3A)
03460 Fanconi anemia pathway
116951492 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmrn03032
]
116951492 (TOP3A)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116951492 (TOP3A)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116951492 (TOP3A)
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Topoisomerases
116951492 (TOP3A)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116951492 (TOP3A)
FA (Fanconi anemia) pathway
116951492 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
116951492
NCBI-ProteinID:
XP_032826044
UniProt:
A0AAJ7TXT1
LinkDB
All DBs
Position
3:complement(2564042..2580577)
Genome browser
AA seq
1006 aa
AA seq
DB search
MLGLVRARVAPPSPLLLLVREVGREVGRGGGHGRCWARCLMASRAGRAPGHVPAGGLERG
VKRALCVAEKNDAAKGIANIMSRGGFTRREGLSKFNKIYEYNYSFSGQQNVNVVMTSVSG
HLLGLEFIAGFKNWRGCHPVDLFDAEIEKICLNDLVAIKRTLEREVRQCQALIIWTDCDR
EGENIGFEIIDVCKAVKPNLQVFRARFSEITQQSIHNACRNLTLPDENTSKAVDVRQELD
LRIGAAFTRFQTLRLQKIFPASLAHQLVSYGSCQFPTLGFVVERFKAIQAFIPEAFHQIK
VTHQNEDGLVEFHWKRNRLFNHTACLILYQLCIENPTAEVLEVTCKPKSKWRPQPLDTVE
MEKLASRKLKINAKETMKIAEKLYTKGFISYPRTETNVFPKGMNLAELVDMQTQDRNWGA
FAQRLLEAGPNPRNGTKSDQAHPPIHPTKYTADLNGNDQRLYEFIVRHFLACCSQDAQGQ
ETTVEIEIAGERFFANGLMITARNYLDVYPYDKWNAKVIPVYTTGVKFQPSNIEMTDGET
SPPQLLSEADLISLMEKHGIGTDATHADHIETIKSRMYVGLTPAQRFLPGELGMGLVEGY
DAMGYEMSKPDLRAELEADLKLICEGKKNNTTVLQQQIQKYKQVFLEAVSKAEKLDEALS
CYLGEPQQSIANEETIPRRLEPVRKCPQCKSNMVLKQTKDGKFMLTCLGFPNCRAAVFFP
DFVLEATRDESICQFCQPNAIHRLKFKFKKNSVIPCTPLDYVGCVGGCDDVINDIADLKY
LRPATTPNQSRQNQPSSVARQRGTCQPSNAYVQRPPQQAPPPMAMLQIPPGRNEESAVVC
NCGIEATLLTVKKEGINKGRMFYKCSSSVCNFFLWADQQDSGLRSAQSNQSSFHSSAVSR
GGHDEVMCSCNNPAVMRTIVKDGPNKGRQFYTCSKPRDEQCGFFLWMADEPSNSAHSVTR
PSPRPDNARPTSNNRTAGEHTTVRAKRTCGICHQPGHIRTTCPMNK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcctcgttagagcgcgggtcgcgccgccgtcgccgctgctgctgctggtccgc
gaagtaggtcgcgaagtaggacgaggaggaggccacggccgctgctgggcgcgctgcctc
atggcctcacgggcgggcagggcgccggggcacgtgccggcgggcgggctggagcgcggc
gtcaagcgggcgctgtgcgtggccgagaagaacgacgcggcgaaaggcatcgccaacatc
atgtctcgcggcgggttcacgcggagggaaggcctgtcgaagttcaacaagatatatgag
tacaactactcctttagtggacagcagaatgtcaatgttgtaatgacctcggtgtctgga
catttattggggttggaattcattgcaggtttcaaaaactggcgaggctgccacccggtg
gatctctttgatgccgaaatcgaaaaaatttgtctcaacgacttggttgccatcaagaga
acattggaaagagaagtgaggcaatgccaagctttgattatttggacggattgtgacaga
gagggagagaacattggttttgaaataatcgatgtctgcaaagcagtgaagccaaacttg
caagttttccgagcaagattttctgagattactcaacagtctattcacaacgcatgtaga
aacctgacactgcccgacgagaacacgagcaaagctgtggacgttcgtcaggagctggat
ctgcgtataggtgcagcgttcactagatttcagacgctacggttacaaaagatttttcca
gcatctcttgctcaccaactggtcagctatggaagttgccagtttccaacacttggtttt
gtcgtagaaagattcaaagcaattcaagcattcattccagaagccttccatcagattaag
gttacacaccagaatgaggatggactggtggagtttcattggaagagaaaccgactgttt
aaccacactgcttgtctcattctctaccagttgtgtattgagaatcccactgctgaagtt
ttagaagtgacgtgcaagccaaagagcaagtggaggccacagcctttggacacagtggaa
atggagaaactggcatctcgaaagctgaaaatcaatgcgaaagaaactatgaagattgct
gaaaagctttacaccaaagggttcattagctacccgcgaacagaaaccaacgttttccca
aaaggcatgaaccttgccgaattagttgacatgcaaacacaagatcgaaactggggtgca
tttgcccaaaggctccttgaagctgggccaaatccaagaaatggcacaaagtctgatcaa
gcccatcctccaatccacccaactaaatacactgcagacctgaatgggaatgatcagcgc
ttgtatgaattcattgttcgtcatttcctggcctgttgctcccaagatgcacaaggacag
gaaaccacagtggaaattgaaattgctggagagaggttttttgcaaatggactcatgatc
acagctcggaattatctggatgtttatccttatgacaaatggaacgctaaggtcatccct
gtttacactacaggagtgaaattccaacccagcaatattgaaatgacggacggggaaacc
agtcccccgcagcttttgtctgaagctgatttaatttccctcatggaaaaacatggaatt
ggtacagatgccacgcatgcagatcacattgaaaccatcaagtccagaatgtacgttggg
ctgacgcctgcacaaagattcctaccaggagagcttggaatggggttggtggaaggctat
gatgcaatggggtatgaaatgtccaagcctgaccttcgtgccgagttggaagctgacctt
aagctaatatgtgaaggaaaaaagaacaacaccacagttttgcaacagcaaatccaaaag
tataagcaggtgtttttggaagctgtttctaaagctgaaaagttggatgaagccctgtca
tgttaccttggagagcctcaacagtctattgcgaatgaagaaactatccccaggagattg
gaacctgtgagaaagtgcccacagtgtaaaagcaacatggtgctgaagcaaaccaaggat
ggcaagttcatgttgacctgcctgggttttccaaactgtagagcagcagtcttttttcct
gattttgttttagaagcaaccagagatgaaagcatttgtcagttttgccagccaaatgca
atacacaggttaaaatttaagttcaagaaaaactctgtaattccttgcacacctttggat
tatgttggatgcgttggtggctgcgatgatgtcataaacgacatagcggatttgaaatac
ctgcgtcctgctacaactcccaaccagtcccgtcaaaatcaaccctcttcagttgcgcga
caaaggggtacatgccagccttcaaacgcatacgtacaacggccaccacagcaggcacct
ccacctatggctatgttacaaatccctcctggaagaaacgaagaaagtgctgtcgtctgc
aactgtggaattgaggctaccctccttaccgtcaaaaaggaaggcatcaacaaagggcga
atgttctacaagtgttcgtcaagtgtatgcaactttttcctttgggcagatcaacaagac
agtggactcagatctgcacagagcaaccaaagttcttttcattcaagcgcagtatctcgt
ggaggccacgatgaagtgatgtgctcttgtaacaatccagccgtaatgcgcactattgta
aaagacggaccgaacaagggtcgccagttttacacttgctccaaacctagagatgagcaa
tgtggatttttcctgtggatggctgatgaaccctcaaattcagctcattccgttacaaga
ccttcaccgcggcctgacaatgcaagacccacgtcaaacaatcgaacagctggcgagcac
accacagtgagagccaaaagaacttgtggaatctgccatcaacccggacacattaggaca
acttgtcctatgaacaaatga
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