Petromyzon marinus (sea lamprey): 116951596
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Entry
116951596 CDS
T09614
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pmrn04054
]
116951596
Pattern recognition receptors [BR:
pmrn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
116951596
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GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRR_1
ThsB_TIR
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
116951596
NCBI-ProteinID:
XP_032826243
UniProt:
A0AAJ7TY03
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Position
43:complement(5790102..5795507)
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AA seq
922 aa
AA seq
DB search
MPITTANCVHRNIHELEEAISDLRGAPVILNLSNNALTVIRNNSFIRLGSLIHLRMDINH
IYVIEAGAFNGLSQLQHLNLSFNNISRLIPGAFNGLIDLKQLIIDNNRLEPTLEMFKPLK
NVIQLSLTNNELSNFSRVVEAIYELPLLQSLNLESNRLTKIIVGKDLRLQETVELMFLSN
NSIESLSLERNFLNHITSLDLFNSSLTNVSELAGLNMSSLLQLRLSMRNLNVSKLQTLNN
MFPKTLTFAYFPLGSLPNLHLVCRLNVTRQVMSLTLTNSYISNVSESFCNCREIQSLDLS
FNRIKSVEKYNFLSPNNTLHNLTLNKNQIEVLESCVKKDNSISVICTPLPYLENVFIKYN
NIFQLESYAFVHMKNLRKLDLTGNDILRLSKRPFHGLHNLSHLVLANNVIRSLNVQSPFS
PLENLKSLMLRNNRLKILNRSVFSNLTNLEILDLGGNALSYLHGETFSELSNLKNLYLDR
NVIRSLDNRAVFAGLHSLRVLDLVKNMIVYNSPTIRNPPFVELNNLINLKLSAQQPYGMK
SIPKNLFKGLYALEKLQLGGNKLLFHGGHPFDGMHNLKYLDIHDVCSGLQIMNKTMFYKL
KKLSSLDLGNDGLGSINNQQFQNLTHLETLYLNDNAIRYVTEELITPMTNLQYLDLRNNP
IDCTCDNAWFKNWSFASNIQVTGLYTLQCEVGHGFTFSFFVDFDTSVCHEKLGKVMFIST
TTTILLTILIPLVYAKVRWHIIYGYYMFRAWFRDYRRNAADKQVYTYDAFISYNSMNEDW
VMSEMVPQLEKEGPPFFKLCVHHRDFVLGKYIVDNIVDAIYNSRKTICVVSESYLLSEWC
SMEIQMASYRLFNEHKDILIMVFLETIPSYKLSAYYRMRRIVNNKTYIVWPDDDIGRELF
WAKLRTALGRPTPSGREQHELP
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcccataacgactgccaactgtgtgcatagaaatatccacgaactggaagaagccata
tccgacctccgtggagctcccgtgatactaaacctatccaacaatgccttgaccgtgata
aggaacaacagcttcataagactgggcagcctgatccacctgaggatggacatcaaccac
atttatgtcattgaggcgggagcattcaacggccttagccaacttcaacatctcaacctg
tcgtttaataacatcagtaggctaatacctggtgccttcaatgggttaatagatctcaaa
caattgatcattgataacaacaggcttgagcccacacttgaaatgttcaagcccttgaaa
aatgtaattcaactgagtctcaccaacaacgaattgtcgaacttctcgcgggtcgtggag
gccatatacgagttgccgttgttgcaatcactcaatctagagagcaacaggctcacaaag
ataattgtcggaaaggatctgagacttcaagagaccgtggaattgatgtttctttcaaac
aactctattgagagcctttcccttgagcgcaacttcttaaatcacattacttcactcgat
ttgttcaacagcagcctcacgaatgtttcagaactcgcgggcctcaacatgagtagcctc
ttacagctgagactcagcatgagaaacctgaacgtctctaagcttcaaacgttaaataac
atgtttccaaaaacactcacatttgcatatttcccattgggcagtttgccaaatctacat
ttagtttgtcggttgaacgtaaccaggcaggtaatgtctctcactctgacgaatagctac
atctcaaacgtgagtgaatctttttgcaactgtcgtgagattcaaagtttggacctttca
ttcaacagaatcaagtcagtcgagaagtacaacttcctgagccccaacaacacgttgcat
aatttaactttgaacaagaaccaaattgaggtgttagagtcttgtgtaaaaaaggataac
tccatatctgtgatatgcacgcctcttccttacttagaaaacgtatttattaagtacaac
aatatatttcaattggaatcttacgccttcgttcatatgaaaaaccttcgcaagctagac
ctcaccggaaatgacattttacgactgagcaaaagacccttccacggtttgcacaacctc
agtcacctggtgctggcaaacaacgtcatccgcagcttgaacgtccagtcgccgttttcc
ccgctcgaaaatctaaaaagccttatgctacgaaacaatcgattgaaaattctgaatcga
agtgtattttccaatttaacaaacctggagattttggacttgggtggcaacgctctctca
tatcttcatggagagacattttctgaactttcaaatttgaaaaatctctacctggacagg
aatgtaatccgcagcctggacaaccgagctgtgtttgctgggctacattctctgcgtgtc
ctcgacctggtcaagaacatgattgtatacaactctccaaccattagaaacccacccttt
gttgaactcaacaatctaattaaccttaaactgagtgcccaacagccatatggtatgaag
agcattcctaaaaacctcttcaaggggctttatgctttggaaaaacttcaactaggtggc
aacaaacttttgttccacggagggcacccttttgatggcatgcataacctcaaataccta
gatattcacgatgtgtgcagtggcttacaaataatgaacaagacaatgttctacaaactt
aaaaaattatccagcctagaccttggcaacgatggactgggttccatcaacaaccaacag
tttcagaacctgacacacttggaaacattatatctcaatgataatgctattcgttatgta
acagaggagttaattacacccatgacaaaccttcaatatttagacttgagaaataatcct
atagattgcacttgcgacaatgcctggtttaaaaactggtcattcgccagcaatatacag
gtgaccggcctttacacgttgcaatgtgaagtgggacatggattcacgttttcctttttc
gtcgactttgacacgtccgtctgtcatgagaagttgggaaaagtcatgttcatctcgacg
accacgaccatcttgctcaccatcctcatcccgctggtgtacgcaaaggtgcgctggcac
attatctacggctactacatgttccgagcctggttccgcgactaccgccgcaacgccgcg
gacaaacaggtgtacacctacgacgcgttcatctcgtacaactcgatgaacgaggactgg
gtcatgtctgagatggtcccccagttggagaaagagggcccgccctttttcaagctctgc
gtccatcaccgcgacttcgtgctgggcaagtacatcgttgacaacatcgtggacgcgatc
tacaacagccgcaagaccatctgcgtggtgagcgagagctacctgctcagcgagtggtgc
tccatggagatccagatggcctcttaccgcctcttcaacgagcacaaggacattctcatc
atggttttcctcgaaacgatccccagctacaagctgtcggcctactaccgcatgcgcagg
attgtcaacaacaagacgtacatcgtgtggcccgacgatgacatcgggcgggagctgttt
tgggccaagctgcgtacggccctcgggaggccgaccccgagtggccgtgagcagcacgag
cttccgtga
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