Petromyzon marinus (sea lamprey): 116951627
Help
Entry
116951627 CDS
T09614
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
pmrn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116951627
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116951627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116951627
Spliceosome [BR:
pmrn03041
]
Common components
Common spliceosomal components
SR proteins
116951627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116951627
NCBI-ProteinID:
XP_032826300
UniProt:
A0AAJ7TY88
LinkDB
All DBs
Position
43:complement(9056578..9065546)
Genome browser
AA seq
415 aa
AA seq
DB search
MARVYIGKLSYQARERDVERFFKGFGRLVDITVKNGFGFVEFEDARDADEAVYELNGKDM
MGMRVIVERARDSSRDGRWGGAPPSRFCRYNPTLQPRGHGRRFGPPVRTEYRLVVENLSS
RCSWQDLKDHMRQAGEVTYADTNRGRANEGVIEFRTLADMRRALDKLDNSELYGRRIRLT
RQRASRSGSRSRSRSRSRSRRRSPSRSPRRRSGSRSPRRRSGSRSPRRRSGSRSPRRRSG
SRSPRRRSGSRSPRRRSGSRSPRKRSASRSPRKRSASPSPRKRSASRSPRKRSVSPSPRK
RSASPLPRKRSASPLPRKRSPSRSPRKRSASPSLRKRSASPLPRKRSASPSPRKRSASPL
PRKRSASPVSRKRSTSPALRKGSRSQSPRKRARSASGSRSRSPSPRAASPTAAAP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagtttacatcggcaagctgagctaccaggcgcgcgaacgggacgtggagaga
ttcttcaagggctttggccgtctcgtcgacatcaccgtcaagaatggctttggctttgtg
gagtttgaggatgcccgcgacgcggatgaagccgtctatgaactcaacgggaaggacatg
atgggcatgcgcgtgatcgtagagcgcgcgcgtgactcctcccgcgacggccgctggggg
ggggcccccccctcgcgattctgcaggtacaaccctacactccagcccagaggccatggg
cgccggttcgggccacctgtacgcaccgagtaccgtctcgttgtggagaatctatctagc
cgctgcagctggcaagacctgaaggaccacatgcggcaggcgggcgaggtgacgtacgcg
gacactaaccgtgggcgagccaacgagggcgtcatcgagttccgcacgctcgccgacatg
cgccgcgcgcttgacaagctcgacaactcggagctgtacgggcgccgcattcgcctgacg
cggcagcgcgcctcaagatctggctcgcgtagccgctcccgctcgcgaagcaggagccgc
cgtcgctcgccctcccgttcgccacggagacgctccgggtctcgctcgccacggagacgc
tccgggtctcgctcgccacggagacgctccgggtctcggtctccacggagacgctccggg
tctcggtctccccgaagacgctctggctctaggtctccgcggagacgctccgggtctcgc
tcgccgcgtaagcgttcggcttcccgatcgccgcgtaagcggtcggcttccccgtcgcca
cggaaacggtctgcttcccggtctccacgcaaacgctccgtttccccatccccacggaaa
cgctcggcttctccgttgccgcgaaagcgatccgcttccccgttgccacggaaacgatcc
ccttctcggtcaccgcggaaacgatcggcttccccgtcactgcggaagcgatccgcttcc
ccgttgccaaggaagcggtccgcttctccgtcaccacgtaaacggtccgcttccccgttg
ccacgtaagcgatcggcgtccccggtgtcacggaaacgctccacctcccccgctttgcgc
aagggctcccgatctcagtcgccacggaaacgcgcccgctctgcttccggcagccgctcg
cgttccccatccccccgcgcggcctcacccacagccgcagccccgtga
DBGET
integrated database retrieval system
