Petromyzon marinus (sea lamprey): 116951848
Help
Entry
116951848 CDS
T09614
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116951848
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116951848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
116951848
NCBI-ProteinID:
XP_032826523
UniProt:
A0AAJ7XAX8
LinkDB
All DBs
Position
44:1832236..1887950
Genome browser
AA seq
1315 aa
AA seq
DB search
MGQLGFGCVGDMAAAQSSYLGQNSMGGCHMQSTANADPLGLDDLEDIDLDGLQEFLQEGT
FGQLSHGALDPALFMSQPPPSLDSVSVRQTNDLISDQAFANSSAYQGYGSSQLQASFQAS
QDMFPQPLPLVVEKEEEVEEDDADGEDLGHAATYADYTPAKLSIGRNHPDRVVETSTLSS
VPLPDITYHLHMPDYAISSGKLSALQLEAITYSCQRHESILPNGQRAGFLIGDGAGVGKG
RTVAGIILENYCCGRKKALWFSVSNDLKYDAERDLNDIGARSIPVHSLNKIKYGSTDRRM
REGVLFATYSALIGESFATGTMRTRIKQVLDWCGPEFDGVVVFDECHKAKNLCPVGAAKP
TKTGKAVLDLQNKLPHARVVYASATGASEPKNMAYMSRLGIWGKDTPFNTFDEFLQSIER
RGVGGMEIVAMDMKLSGMYIARQLSFHGVTFRVVEIPLPEQFRNVYDRAVKLWLEMMDKF
DRAASVCPDVSRKSLWGQFWSSHQRFFKYMCIAGKVQQAVTLAHEALKQGKCVVIGLQST
GEARTREELELGNGTIDKFVSAAGGVLKALIKKNFPSGKARVRAAPKRIIRQECADACSK
ADMKRRRLNERCGRKGKLARLKEGASATTVTPAMAALLGCPQARDSDDSGLEFRSEGESD
DGGATASPLPLGAAPPPPLAMPPFGSATSAAAAMMNAFRTASAQQENGGRTIKVEEEEDD
DDDDVIIITPEDPARAMTSAAAVPIDYTGMLFEMKQDLLRKVEELTKDLPLNTLDELIEK
LGGPSIVAEMTGRKGRIVQKADGKVAYESRAEPGVHIDIVNIKEKQRFMTGEKHVAIISE
AASSGISLQADRRAENKRRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYLFLISELA
GERRFASIVAKRLESLGALTHGDRRATESRDMSRFNFDNKYGREAMEKVLKSLINQIDFH
YMVPPPASYEGDFFEDMRQGLVGVGLITKDYKGNYSIEKGMNQYSHNGVQLGPNQAELGL
AKFLNRILGMEVTKQNAIFQYFIDTFEVTIDAAKKEGKYDMGILDLAPGVEEINEEKKHT
FKIPSSMGSGQVVLYTVKVDRGISWDHALERRKKMTGLNDGFYVMKLMRSGRQMAILAEE
FDKEKKLFVIYRPNTGKQRHQEELRDLSRKYDKVTEEEAEDVWKYQYDWSFDSCSHAFWS
GRCRNVAALGSCSHGGRLCLHHVLCGTLLSVWRGVEDAIQQVTNSTSMQIVRLQTKDKRR
QVGIKIPENCLSKVMKVLANQDQALLLARESVIVPYPSSPSALFIDETFPDGLNG
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgggccagctgggttttggctgcgtcggtgacatggcggcggcccagtcgagttacctg
ggacagaactccatgggcggctgccacatgcagtcgacggcgaatgcggacccgctaggc
ctcgacgatttggaagacatcgacttggatgggctccaggaattcctgcaagaaggaacg
tttggacagctgtctcatggagccctggaccctgcgcttttcatgtcgcagcctccgccc
tctctggactccgtgtcggttcgtcaaacaaacgacctcatctcagaccaggctttcgct
aacagctctgcgtaccaaggatatggttcaagtcagctccaagcgtcatttcaggcttct
caagatatgttcccccagcctttaccactggtggtggaaaaggaggaagaggtggaggag
gatgacgctgacggggaggatctgggccacgcggcgacgtacgccgattacacgccggcc
aaactgtccatcgggcgcaaccatccggaccgcgtggtggagacgagcacgctgtccagc
gtgccgctccccgacatcacctaccacctgcacatgcccgactacgccatctccagcggc
aagctctccgccctgcagctcgaggccatcacctactcctgccagcggcatgagagcatc
cttcccaatgggcagcgtgcgggcttcctgatcggagacggagccggagttggtaaaggc
cgcaccgtcgctggaatcatcctggaaaactactgctgcgggcggaagaaagcgctctgg
ttcagtgtctccaacgacctcaagtacgacgccgagagagatctgaacgacatcggagct
cgcagcatccccgtgcacagcctcaacaagataaagtacggcagcacggatcggcggatg
cgggagggcgtcctcttcgccacgtactcggcgctcatcggcgagagcttcgccacgggc
accatgcgcacgcgcatcaagcaggtgcttgactggtgcgggcccgagtttgacggagtc
gtggtgttcgacgagtgtcacaaggcgaagaacctgtgccccgtgggagccgccaagccc
accaagacgggcaaggccgtgctggacctgcagaacaagctgccgcacgcccgcgtcgtc
tacgccagcgccacaggtgcatctgagccgaagaacatggcgtacatgagccgtctcgga
atctgggggaaggacactcccttcaacaccttcgatgagttcctgcagtcgattgagagg
aggggcgtcggcgggatggagatcgtggcgatggacatgaagctgagcgggatgtacatc
gcccgtcagctcagcttccacggcgtcaccttccgcgtggtggagattccgctgccagag
cagttccgaaacgtgtacgaccgtgcggtcaagctgtggctggagatgatggacaagttt
gaccgcgcggccagcgtctgcccggacgtgtcgcgcaagtcgctgtggggtcagttctgg
tcgtcgcaccagcggttcttcaagtacatgtgcatcgcgggcaaagttcagcaagcggtc
accctggcgcatgaggcgctcaagcagggcaagtgcgtggtgatcggactgcagtcgacc
ggtgaggcacgcacccgggaggagttggagctcggaaacgggacgatcgacaagttcgtt
tcggcagctggtggagtcctcaaggctctgatcaagaagaatttcccgagcggaaaagcc
agagtacgagccgcacccaagaggataataagacaggagtgtgcagatgcgtgcagcaag
gcagacatgaaacgaagacggctcaatgagcggtgcggcaggaaggggaagctggcgcgg
ctgaaggagggcgcctcggccaccaccgtcacgccggccatggcggccctgctgggctgc
ccgcaggcccgggacagcgacgacagcggcctggagttccgcagcgagggcgagagcgac
gacggcggcgccaccgcgtctccgctgccgctgggcgcggcgccgccgcccccgctggcg
atgccgccgttcggctcggcgacgtccgcggcggcggccatgatgaacgcgttccgtacg
gcgtccgcgcagcaggagaacggggggcggaccatcaaggtggaggaggaggaggacgac
gacgacgacgacgtcatcatcatcacgccggaagaccccgcgcgagccatgacgtccgcg
gctgccgtccccattgactacacggggatgctgtttgagatgaagcaggatctgctgagg
aaggtggaggagctgaccaaggatcttcccctgaacactctcgacgagctcatcgagaag
ctgggagggccttccatagtggccgagatgaccgggaggaaggggcgcatcgtgcagaag
gcggacggcaaggtcgcgtacgagtcgcgtgcggagcccggcgtccacatcgacatcgtc
aacatcaaggagaagcagcggttcatgaccggcgagaagcatgtcgccatcatttcggag
gcggccagctcgggcatctccctgcaggccgaccggcgagccgagaacaagaggcggcgc
gttcacatgacgctcgaactcccgtggagcgccgaccgcgccattcagcagttcggtcgc
acgcaccgctccaaccaggtgtcggctcctgagtatctcttcctcatctcggagctcgcc
ggagagaggaggtttgcctcgatcgtggccaagcgactggaaagcctgggagcgctgacg
cacggagatcggcgagcgacggagtcgcgagacatgagccgattcaacttcgacaacaag
tacggcagggaggccatggagaaggtcctcaaatcgctcatcaaccagatcgacttccac
tacatggtcccaccgccggctagctacgagggtgacttcttcgaagatatgaggcaaggt
ctggtgggagtggggctgattacgaaggattacaaaggaaactactccattgagaaaggc
atgaaccagtactcgcacaatggcgtgcagttgggaccgaatcaagcagagctgggcctc
gccaagttcctcaaccggattctgggcatggaggtgacgaagcagaacgccatcttccag
tacttcatcgacacgtttgaagtcactatcgacgcggccaagaaggagggcaagtacgac
atggggattttggacctcgcgcctggcgtggaggagatcaacgaggagaagaagcacacg
ttcaagatcccctcgtccatgggcagtgggcaggtggtgctctacacggtgaaggtcgac
cgaggaattagctgggaccacgcgttggaaaggagaaaaaagatgacgggactgaacgac
ggattctacgtcatgaaactgatgcgctcgggccggcagatggcgatactcgccgaggag
tttgacaaggagaagaagctgttcgtcatctaccgaccaaacacaggaaagcagcgtcac
caggaggagctccgtgacctcagcaggaaatacgacaaggtcacggaagaggaggcggag
gatgtctggaagtaccagtacgactggtcgttcgacagttgcagccacgccttctggagc
ggccgctgccggaacgtggcggcgctcggctcttgctcgcacggcggccggctgtgcctg
caccacgtgctctgcggcacgctgctgagcgtgtggcgcggggtggaggacgccatccag
caggtcaccaactccaccagcatgcagatcgtgcggctgcagaccaaggataagcggcgg
caagtgggaatcaaaatcccggagaactgcctgagcaaggtgatgaaggtgctggccaac
caggaccaggcgctgctgctggcacgcgagtcggtcatcgtgccgtaccccagcagcccg
tcggcgttgttcatcgacgagacctttcccgacggcctcaacggctaa
DBGET
integrated database retrieval system
