Petromyzon marinus (sea lamprey): 116951885
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Entry
116951885 CDS
T09614
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04137
Mitophagy - animal
pmrn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116951885
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116951885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116951885
03009 Ribosome biogenesis [BR:
pmrn03009
]
116951885
04131 Membrane trafficking [BR:
pmrn04131
]
116951885
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116951885
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116951885
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116951885
Membrane trafficking [BR:
pmrn04131
]
SNARE
SNARE associated proteins
Others
116951885
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116951885
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116951885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
NPHP3_N
AAA_14
RNA_helicase
Mg_chelatase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
AAA_17
ATPase_2
AAA_18
IstB_IS21
AAA_7
DUF815
ABC_tran
AAA_24
NACHT
NB-ARC
TsaE
ResIII
AAA_lid_PRS2_C
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
bpMoxR
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
116951885
NCBI-ProteinID:
XP_032826593
UniProt:
A0AAJ7X9K8
LinkDB
All DBs
Position
44:377805..452980
Genome browser
AA seq
805 aa
AA seq
DB search
MASADPNDVATAILKQKVRPNRLVVDEAINEDNSVVSLSQVKMDELQLFRGDTVMLKGKK
RRETVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVVSIQACPDVKYGKRVHVLPLDDTV
EGITGNLFEVYLKPYFLEAYRPVRKGDIFLVRGGMRAVEFKVVETDPNPFCIVAPDTVIH
CEGEPIKREDEEEALNEVGYDDIGGCRRQLAMIKEMVELPLRHPALFKAIGVKPPRGILL
YGPPGTGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFI
DELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRTHVIVMAATNRPNSIDPALRRFGRF
DREVDIGIPDSTGRLEILQIHTKNMKLSSDVDLEQVGNETHGHVGADLAALCSEAALQAI
RKKMDVIDLEDETIDAEIMNSLAVTMDDFRWALGQSNPSALRETVVEVPNVTWEDIGGLE
SVKRELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK
GPELLTMWFGESEANVRDVFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQ
ILTEMDGMGTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRSAILKANVRK
SPIAKDVDLEYLAKTTNGFSGADLTEICQRACKLAIRESIESEIRRERDRQSNPDGAMDV
EDEDAVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPGASQGGSA
PNQGPSGSGGSGNLYHEDADDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcagatcccaacgatgtggcgaccgcgatcctaaagcagaaggtgcgaccc
aaccggctggtggtggatgaggccatcaacgaggataacagcgtggtgtctctctcccag
gtgaagatggacgagctgcagctgttccgtggagacacggtgatgctcaagggcaagaag
cgccgcgagacggtgtgcatcgtgctctctgacgacacgtgctcggacgagaagatccgc
atgaaccgtgtcgtgcgcaacaacctgcgcgtgcgcctgggcgacgtggtcagcatccag
gcgtgtccggatgtgaagtacggcaagcgcgtgcacgtgctcccgctagacgacaccgtg
gagggcatcacggggaacctgtttgaggtctacctcaagccgtactttctggaggcgtac
cggccagtccgcaaaggggacatcttccttgtgcgtggcgggatgcgcgcggtggagttc
aaggtggtggagaccgacccgaaccccttctgtatcgtggcgccagacaccgtgatccac
tgcgagggcgagcccatcaagagagaggacgaggaggaggcattgaacgaggtcggctac
gacgacatcggcgggtgccgccgccagctcgccatgatcaaggagatggtggagttgccc
ctgcgccacccggcactcttcaaggcgattggcgtgaagcccccgcgtggcattctgctt
tatggaccccctggcaccggcaaaaccatgatcgctcgtgccgtggcaaacgagactggc
gccttcttcttcctcatcaacggtcccgagatcatgagcaagctcgcgggcgagtcggag
agcaacctgcgcaaggcgttcgaggaggccgagaagaactccccggccatcatcttcatc
gacgagcttgatgccatcgcacccaagagggagaagacgcacggtgaggtggagcgccgc
atcgtctcccagctgctcacgctcatggacggcctcaagcagcgcacgcacgtcattgtc
atggcggccaccaaccggcccaacagcatcgaccccgcgctgcgccgattcggccgcttt
gaccgagaggtggacatcggcatcccggactcgacgggacggctggagattctgcagatc
cacaccaagaacatgaagctctcgtcggatgtggatcttgagcaggttgggaatgaaact
cacggccacgtgggtgccgacttggctgcgctgtgctcggaggccgccctgcaggcgatc
cgcaagaagatggacgtcatcgacctcgaggacgaaaccattgacgccgagatcatgaac
tcgctcgccgtaaccatggatgacttccggtgggcgctgggccagagcaacccgtcggcg
ctgcgcgagacggtggtggaggtgcccaacgtgacgtgggaggacatcggtggcctggag
agcgtcaagcgtgagctgcaggagcttgtgcagtacccggtggagcacccggagaagttc
ctcaagttcggcatgacgccctccaagggcgtgctgttctacgggccgccgggctgcggc
aaaacgctgctggccaaggccatcgccaacgagtgccaggccaacttcatctccatcaag
gggcccgagctgctcaccatgtggttcggcgagtccgaggccaacgtgcgcgacgtcttc
gacaaggcccggcaagcggctccgtgtgtgctcttctttgacgagctggactccatagcg
aaggcacgcgggggcaacgtcggcgacggtggcggtgcggccgaccgtgtcatcaaccag
atcctcaccgagatggacggcatgggcaccaagaagaacgttttcatcatcggcgccacc
aaccgaccggacatcattgaccctgccatcctgcgtcccggtcgcctggatcagctgatc
tacatcccgctacccgacgagaaatcccgcagcgccatcctcaaggccaacgtgcgcaag
tctcccatcgccaaggacgtggacctcgagtacttggccaagaccaccaatggcttctcg
ggcgccgacctcacggagatctgccagcgtgcctgcaagctggcgatccgcgagagcatc
gagtcggagatccggcgcgagcgcgaccgccagagcaacccggacggtgccatggacgtg
gaagacgaagacgcggtgcctgagatccgccgcgaccactttgaagaggccatgcgcttc
gcccgacgctccgtcagcgacaacgacatccgcaaatatgagatgttcgctcagacgctg
cagcagagccgcggctttggcagcttccggttcccgggagcatctcagggtggctcggcc
cccaaccagggtcccagcggaagcggtggcagcggcaatctgtaccacgaggatgcggac
gatgacctctacggctag
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