Petromyzon marinus (sea lamprey): 116952032
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Entry
116952032 CDS
T09614
Symbol
RPP40
Name
(RefSeq) ribonuclease P protein subunit p40 isoform X1
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116952032 (RPP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116952032 (RPP40)
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116952032 (RPP40)
03029 Mitochondrial biogenesis [BR:
pmrn03029
]
116952032 (RPP40)
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
116952032 (RPP40)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
116952032 (RPP40)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
116952032 (RPP40)
Mitochondrial biogenesis [BR:
pmrn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
116952032 (RPP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
116952032
NCBI-ProteinID:
XP_032826902
UniProt:
A0AAJ7TZG3
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All DBs
Position
45:7701163..7712535
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AA seq
359 aa
AA seq
DB search
MLPAISKHPGFKLVCEKSHFGNEKSKHDRHLKDHHFVYKVEVFIPECQLLPEPIAALCKE
VNPYLRVRGVPAAAFLRQDFIQQFVSQGAFYALSYNTRIDQDNTLALLPTGTLILSVTKD
TYEELGLQGQPSQYTGRKPLQYVIKLQLTEPTMAPGRKCYERAVWALSEKVPLRFDVLVS
WQPPEGKAAKAPAKFFAEWDCREVRADVTVRPVAARACPALDSLSLQPEDGAACGAQDFF
DWLGAVSCDIDCSSDSSASMRCPEPSLPMGPSLLCSITGLIRPDIVIQLLSALRRYFEEP
KLACWATLTAHGFADSPVSWASLEHGFHKGGENLQTLLAFANGNYWLLRAVGTNDRCPS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagccatctccaagcacccgggcttcaagctcgtctgcgagaagtcccacttt
ggcaacgagaagtcaaagcatgaccggcatctcaaagaccatcacttcgtctacaaggtg
gaggtattcataccagagtgccaactgctacccgagcccatcgccgccctgtgcaaggag
gtcaacccttacctccgggttcggggcgtcccagcggctgccttcctgcgacaagatttc
attcagcaattcgtctcccaaggggcgttttacgcattgtcttacaacactcggatagac
caggacaacacactggccctgctgccaacaggaacgttaatactgagtgtgaccaaagac
acgtatgaggagcttgggctgcagggtcagccgtcgcagtacaccggccggaagcctctc
caatatgtgatcaagctgcagctcacggaacccacgatggccccgggacggaaatgctac
gagcgagctgtgtgggccctctccgaaaaggtgcccttgcgcttcgatgtcctcgtcagc
tggcagccgcctgaagggaaggcggcaaaggcacccgcaaagttctttgccgaatgggac
tgcagggaggtgcgcgcggacgtgacggtgaggcctgtggccgcgcgggcatgccctgcg
ctcgacagcctcagcctccagccagaagacggggcggcctgtggggcccaagacttcttt
gattggctgggagctgtgtcatgtgacattgactgctccagtgacagctccgcgtcgatg
aggtgcccggagccaagcctgcccatgggcccgagcctgctgtgctccatcacgggtctg
attcggcccgacatcgtcatccagctcctgtccgctctcaggcgttactttgaggagcca
aagctggcgtgctgggcgacgttgacagcgcacggcttcgccgactcgcccgtgtcatgg
gcaagcttggagcacggattccacaagggcggagagaacctgcagaccctgctcgccttc
gccaacggaaactactggctgctccgcgccgtcggcaccaacgatagatgcccgtcctga
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