Petromyzon marinus (sea lamprey): 116952156
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Entry
116952156 CDS
T09614
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116952156 (CARMIL1)
Membrane trafficking [BR:
pmrn04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
116952156 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
116952156
NCBI-ProteinID:
XP_032827155
UniProt:
A0AAJ7TZV8
LinkDB
All DBs
Position
45:10671944..10732313
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AA seq
1474 aa
AA seq
DB search
MADEATDIPPELADSVKEVMGRVKIGLKRRVKLELRADRVEHRVLILTACRTFLLTARVP
SKVETSFHFLDIESLTSVKPCQLLIDTDRQSFPFKLASQEETDQIVGYVGCSLKKLFPGA
SPMRLMQRVVVEPQERLARLQAVWESHLPPEPGPCGGFSQMYACLCDYYNLPYREEVQWD
VDTIYLSQDTHELNLQDFSHLDNRDLVPIVAVLEFNQWFTKLLAQDLKLGSEVSEQVLRA
VARSTQLQELLLENAGLKTDFAQKLGVALAQNGGTALHSISLAGNALEDRGAACLSGALG
KLGKGLALLNLSRTALTAKGVNTLAQALSSAPVTASTLTHLDLSGNALRGDDLTHLHSFL
AVPNALEHLDLSATDCAVDSLFGPFLRGCCHHLAHINLSRNVFSQRRTRDIAPSCKQFFC
SSLALRHLGLSGTKLPAEAVKALLLGLTCNQHARDVSLDISSTELGHCLRSAGAQVLEGC
IADVHNISSLDVSDNGLESDLATLTVWLCKNRSIKHLALGRNFSNMKPKNVAPVLDNIVQ
MIQDEDSPLQSLSLADSKLKADLTIVINALGSNTSLTRVDLSGNSMGDIGAKMLAKALQI
NTKLRTVIWDKNNTTAQGFQDVAGALEKNYTLRYMPTPVNDASVALKANPEKTEEALQKI
ENVLLRNHESRRFSPEQAYRLQQGIVTSTSQQMVDRMCVKVRDHLNSLRNVQAESVRDDV
RTAESLVRDAKNARTLLPNLYHVGAEAWYGESGARGSPIQAKLELMAGEITVVVEKQLET
LLDSMLDAAQALCPHVMRPGGEMREELRASSAGKVSVPQDFVRKVLLTQAAADILNKISE
VKLATASHLSDRLMDEILGSLSTSQHRLGEHVHRSGRPVPRAQRRDSEELDAPEEGTRER
RGDERERRGDERERRGDEAAGTHDAERHEDADSCTTLCCPSLTPKSKRKSIYSRKLRPVS
KLFEFEIDPVAMTSTTETTLTPTPTSLLDEAATPESPGGGGGGSGTDRSPHAALAELPSE
ECRKLEHVTKGRPRRAKKQPLGRLASCTGGIAESQEGEQNGIMGRVDEGVDEFFSKKVSR
VSSKRGSLRRAESTDADASERRRDSKKGSFFGFMRPRGSYKASPSPGPTAGAAAPGPAAE
PAAEAPRTEAPRTEVKAAEMEAPAIAAKPDEEERSPHPFAEDTVRSVEPARAGGAAIEPG
KVAAVAEPSKPSPPGARRVPPGYPVMGGSLLAEMKAKQERRAIIQQRNQKSAEAEGLGLG
VAVPRDAAAKVAPLCPAGPTSPRGPLSPSPPSKPSPLGKPAFSPRPKPSWTSEESGDSVS
LGQGRSPSESSATPGHSSRSATPEGELSGDDLRTDTDNELEQMSQRNNNLTNPAHEQLSP
LPGTHEKRGAPGPGAELALSSGGGGGAHRSHSESGGGDGDELAAASRARKKVVQRRKASQ
DGSGGGTPHGAMMGTGAGGGPTHRDKSSDSTDEG
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaggcgacggacatccctcccgagctcgcagacagcgtcaaggaggtgatg
ggccgcgtgaagatcggcctgaagaggagggtgaagctggaactgcgtgccgaccgcgtg
gagcaccgcgtgctgatcctgaccgcgtgccgcacgtttctgctgactgcccgcgtccct
tccaaggtggagacttctttccacttcctggacatagaatcgctgacgagtgtgaagccg
tgccagctgctgatcgacacggatcggcagtccttccccttcaagctggcgtcgcaggag
gagaccgatcaaatcgtcggctacgtcggctgctccctcaagaagctcttccccggggcg
tcccccatgaggttgatgcagagggtggtggtggagccgcaggagcggctggcgcggctg
caggccgtgtgggagagccacttgccccccgagccaggcccgtgcggcggcttctcccag
atgtacgcgtgtctgtgcgattactacaacctgccttaccgcgaggaggtgcagtgggac
gtggacaccatctacctctcccaggacacccacgagcttaacctgcaggacttcagccac
ctggacaatcgggacttggtaccgattgtggctgtgctggagtttaaccagtggttcacc
aaactattggcacaggacctgaagttgggctcggaagtgagcgagcaagtcctccgggcc
gttgcgcgctccacgcaactccaggaacttctgttggagaatgccggcctcaagacggac
tttgctcagaagctgggagtggccctggcgcagaatggcggcacggccctgcacagcatc
agcctcgcgggcaacgcgctcgaggacagaggtgccgcctgcttgagtggagccctgggg
aagctgggaaaaggactcgccctgctcaacctctcccgcaccgccctcaccgccaagggc
gtcaacaccctggcccaggcgctgtccagcgcgccggtgaccgcctccacgctcactcac
ctggacctgtcggggaacgctctgcggggagacgacctcacccatctgcacagtttcctg
gcggtgcccaatgccctcgaacacctcgacctatcggcgaccgactgcgccgtggactcg
ctgttcggtcccttcctgcgtggctgttgccatcacctggcgcacatcaacctctctagg
aacgtgttttcacagagacgaacgagagacatcgccccgtcgtgcaagcagttcttctgc
agctcccttgcgctgcgtcacctcggcctctccggcaccaagctgccagccgaggccgtc
aaggcgctgctgctgggcctcacctgcaaccagcacgcgcgcgacgtctcgctcgacatc
agcagcaccgagctgggtcactgtctaaggtcagcgggtgcgcaagttttggaagggtgc
atcgcagatgtacacaacatcagcagcctggacgtgtccgacaatggcctggagtccgac
ctggccacgctaaccgtttggctgtgcaagaaccgctccatcaagcatttggcgctgggc
aggaatttcagcaacatgaagcccaagaacgtggcaccggttctggataacatcgtgcag
atgatccaggacgaagactcgcctctgcagtcgttgtccttggcggactccaagctcaag
gcggacctcaccatcgtgatcaacgccctgggaagtaacacgtcgctgacgcgcgtcgac
ctcagcgggaacagcatgggcgacatcggggccaagatgctggccaaggccctgcagatc
aacaccaagctgaggactgtgatctgggataaaaacaacacgaccgcacaaggcttccag
gatgtggcgggagccctggagaagaactacacgctgcggtacatgccgaccccggtgaac
gacgcctccgtggccctgaaagcgaatcccgagaaaacggaagaggccctccagaagatc
gagaacgtgttgctgcggaaccacgagagtcggcgcttctcccccgagcaagcgtaccgg
ctgcagcagggcatcgtgacgagcacgtcgcagcagatggtggaccgcatgtgcgtcaag
gtgagggatcacctcaactccctgcgcaacgttcaggcggagagcgttcgcgacgacgtc
aggaccgctgagtctctcgtacgcgatgccaagaacgctcgcacattgctgcccaacctg
taccacgtgggtgccgaggcgtggtacggagagagcggcgcccgcgggtcgcccattcag
gccaagctggagctcatggccggagagatcaccgtggtcgtcgagaagcagctggagacg
ctgctggactcgatgctggacgcggcgcaggcgctgtgcccgcacgtgatgaggccgggc
ggggagatgcgggaggagctgcgtgcgtccagcgccggaaaggtctccgtgccgcaagac
ttcgtccgcaaggtcctcctcacgcaggccgccgccgacatcctcaataaaatcagcgag
gtgaaactcgccacggcgtcgcacctctccgaccgtctcatggacgagatcctgggcagc
ctctccacgtcgcagcatcggctgggtgagcacgtgcaccgctcggggcgccccgtcccc
cgcgcccagcggcgagactcggaggagcttgacgcgccggaggagggaacgcgcgagcgg
cgcggcgacgagagagagcggcgcggcgacgagagagagcggcgcggcgacgaggccgcg
gggacgcacgatgccgagcggcacgaggacgcggacagctgcacgacgctctgttgcccg
agtctcaccccaaaaagtaaacggaaaagcatctacagccggaaactacgccccgtgtcc
aagttgtttgagtttgagatcgacccggtcgccatgacgagcacgacggagacaaccctg
accccgaccccgacgtcgctcctggatgaggccgcgactccggagagtcctggcggcggc
ggcggcggcagcggcacggaccgcagccctcacgccgcgttggccgagctaccgtccgag
gagtgccgcaagctggagcacgtgaccaaggggcggcctcgcagggccaagaagcaaccg
ctggggcggctggcgtcctgcacgggcggcatcgcggagtctcaggagggcgaacagaac
ggcatcatgggacgcgtggatgagggagtcgatgagtttttctccaagaaggtgtcacga
gtctcctccaagaggggttcgctgcggagggccgagtccacggacgccgatgcctccgag
aggcggcgcgactctaagaaggggagcttcttcgggttcatgcggccacggggcagctac
aaggcctcccccagccccgggcccacggccggcgccgcggccccaggtccggccgcggag
cccgcagcggaggccccgaggacggaggccccgaggacggaggtgaaggccgcggagatg
gaagcgccggcaatcgccgctaagcccgacgaggaagagcggtcgccgcacccgttcgcc
gaggacaccgtgagaagcgtggagcctgccagggccgggggagcggccatcgagcctggc
aaagtcgcggcggtggcggagccaagcaagccgagccccccgggagcgcgacgtgtcccg
ccaggctacccggtgatggggggcagcctcctggccgagatgaaggccaagcaggagaga
cgcgccatcatccagcagcggaaccagaagtcagcggaggccgagggcctgggtctcggc
gtcgccgtcccgcgcgatgccgccgcgaaggtcgcgccgttgtgtcccgcgggtcccacc
agtccccgcgggcccctgtcgccctcgccgccaagcaagccgtcgcccctcggcaagccg
gccttctcgccacggcccaagcccagctggacctcagaggagagcggggactccgtgtct
ctgggccagggacggtctccgtcggagagcagcgccactccgggccacagcagtcgctct
gccacccccgagggtgagctctccggtgatgatctgaggacggataccgacaacgagctt
gagcagatgtcccaacgtaacaacaacctcaccaacccagcccacgagcagctatccccc
ctgccgggcacgcacgagaagcggggagcgccgggccctggcgccgaacttgctttgagc
agcggcggcggcggcggcgcgcaccgcagccactccgagtcggggggcggtgatggcgac
gagctggcagcggcctcccgcgccagaaagaaggtggtacaacggcggaaggcgagccaa
gacggatcggggggtggcacgccgcacggggcgatgatgggcaccggggcggggggaggg
cccacgcaccgcgacaagtccagcgactcgacggacgaaggctga
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