Petromyzon marinus (sea lamprey): 116952218
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Entry
116952218 CDS
T09614
Name
(RefSeq) F-box/WD repeat-containing protein 12-like
KO
K10267
F-box and WD-40 domain protein 12/13/14/15/16/17/19
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116952218
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116952218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
F-box
WD40
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
EIF3I
PQQ_2
Beta-prop_EML
Beta-prop_WDR75_1st
WDR55
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Sema4F_C
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
116952218
NCBI-ProteinID:
XP_032827262
UniProt:
A0AAJ7U058
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All DBs
Position
46:5756686..5774407
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AA seq
627 aa
AA seq
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MKASSPEPSPPLTILQCDFLKIRPAHAPSPSLHLLGFTRKQTSPPRDSADIFEPLTEPGP
PEGGFVAAQGASRRFESYPRRGRAAMECEQQQQLPFDCLAHVFTFLQAEQLLRAAAVNRL
WNAVANSPALWRCLCRRRWAFCRVERASEWKRYYLRRQGLERALGCGRPGADYTCTTLRG
HAGAISAVCYLTDGEPHIDTAQGDDDYDDDGQENTERGKSGASAPRPEKTRPLTCVCSAS
NDGSVRAWDVHTGQQLWVAGQVGGTAVECLVAVPTLGLVVSGSRVGEVTVWDAAGGHEVA
TRADPTPGVMVLATCALEDGHFLLAGGNMGTLRVLALPSLAPVRSLLLAEDHTLNLLSPA
PVGTVILVGATHSPDVPVQLLGVRALCTVDEEEAPPDPRRPLPPRPANWRPNPMAAMVTA
TLPEIAGLGVLAAAWFPANPARLAAAVELADGQHEVRCFDVALDKARGRARAKEHIAVSE
VAVRFTIPKEQWATQAPFLRTASHNIVLTTLGQQLSVWDAATGGRLATFSDHKQQITGIH
VDPFRVVSCSLDLSLRVYTWAQAAEGMEVAAAAAAAGQQLVSKYTLLGGSLTCSRGFRNV
VSDCSSVVGVVQANNGRDVLKAYNFGL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcctcctcccccgagccgtcgccacctctcacgatcctgcaatgtgatttttta
aaaatccgccccgcacacgcgccgagtccatcgctccatctcctcgggttcacgcggaag
caaacgagccccccccgtgactccgctgatattttcgagccgctcacggagccggggcca
cctgagggaggcttcgtggccgcgcagggtgcgagccgacggttcgagtcctatccccgg
cgcggcagggcagcaatggagtgcgagcagcagcagcagctgccgtttgactgcctggcg
cacgtgttcaccttcctgcaagcagagcagctgctgagggcagcggccgtcaaccggttg
tggaatgctgtggccaactcacccgcgctgtggaggtgcctgtgccggcgccgctgggcg
ttctgccgtgtggagcgagcgagcgagtggaagcgctactacctgcggcgccaggggctc
gagagggcgctgggctgcgggcgaccgggcgccgactacacctgcaccacgctgaggggc
cacgccggcgcgatctcggccgtgtgctacctcacggacggagaaccacacatcgacacg
gcacagggcgacgacgattacgacgacgatggtcaggagaacacggagagaggaaagagc
ggagcgagcgcgccgcggccagagaaaactcgacccttgacctgcgtgtgcagcgccagc
aatgacggcagcgtgcgagcgtgggacgtgcacacgggccagcagctgtgggtggctggg
caagtgggcggcacggccgtggagtgcctggtggctgtgccgacgctgggactcgtggtg
tcggggagccgggtcggagaagtcacggtgtgggatgcggccggaggtcacgaggtcgcg
acccgagctgaccccacgcccggggtcatggtgctcgcgacgtgcgcgttggaggacggc
cacttcctgcttgcgggcggcaacatgggcaccttgcgggtactggcgctgccctccctc
gcccccgtgcgcagccttctcctggccgaggaccacactcttaacctgctgtcgccggcg
ccggtcggcaccgtgatcctggtgggtgccacccacagccctgacgtgccagtgcagctg
ctgggcgtgcgagcgctgtgcacggtggacgaggaggaggcacctcccgacccccgccgg
cctctgcccccgcgccccgccaactggcgccccaatcccatggcggcgatggtgacggcg
acgctcccggagatcgccggtctcggcgtgctggcggcggcgtggttccccgccaatcca
gcgcgcctcgccgccgccgtcgagctggccgatgggcagcacgaggtgcgctgcttcgac
gtggcgctggacaaggccaggggcagggccagggccaaggagcacatcgccgtgagcgag
gtggcggtgcggttcacgattcccaaggagcagtgggcgacgcaagcgccgttcctgcgc
acagcgagccacaacatcgtcctcacgacgctcgggcagcagctgagcgtgtgggacgcg
gccaccgggggtcgcctcgcgacgttcagcgaccacaagcagcagatcaccggcatccac
gtggacccgttccgcgtggtgagctgctcgcttgacctgtccctgcgcgtctacacctgg
gcgcaagcggcggagggaatggaggtggcagcggcggcagcggcggcgggacaacagctg
gtcagcaagtacaccctgctgggggggtcgctgacctgctcgcggggcttcaggaacgtg
gtcagcgactgcagcagcgtggttggcgtggtgcaggccaacaatggacgggacgttctc
aaggcttacaacttcggcttgtga
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