KEGG   Petromyzon marinus (sea lamprey): 116952290
Entry
116952290         CDS       T09614                                 
Symbol
RBM17
Name
(RefSeq) splicing factor 45 isoform X1
  KO
K12840  splicing factor 45
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116952290 (RBM17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmrn03041]
    116952290 (RBM17)
Spliceosome [BR:pmrn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116952290 (RBM17)
 Complex B
    116952290 (RBM17)
SSDB
Motif
Pfam: G-patch RRM_1 RBM39linker
Other DBs
NCBI-GeneID: 116952290
NCBI-ProteinID: XP_032827391
UniProt: A0AAJ7XAL8
LinkDB
Position
46:5665226..5680061
AA seq 423 aa
MSLYDDLRVERSDSKTEGWSKNFKLLQSQLQVKKAALTQAKNQRGKQSTVLAPVVDLKRN
SGPEERTSFPEPPPPPPVATTPKVESGAAQMAFMGEMLIPVADEYDPMYPNDYDKVVKRQ
REDRQRQREHERQKEIDDREKRRKERHEASGMSRRPESDDEEEYEVEKRKRGTMGAAIAP
PSSLMERDKDLAPDDEIKRGRMSGKAAIPPPNYEDSGERPRSPPGGSSSFISNMGGTVAH
KIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIVIGDNVPKEAEAATVVAAAAAAA
ASASPSPASAKKQEPNPLTEILKNPTKVVLLRNMVGPGEVDEDLESETKEECEKYGKVIK
CVIFEMPGAPEDDAVRIFLEFERMESAIKAVVDLNGRYFGGRIVKAGFYNLDKFRRLDLA
TSV
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgtcgctgtacgatgatcttcgcgtggagaggagcgactccaagacagagggatggtcc
aagaacttcaagctcctgcagtcgcagctgcaggttaagaaggcggcgctcacacaggcc
aagaaccagaggggcaagcagagcacagtgctggcacctgtggttgacctcaagcgcaac
tcgggtccagaggagcggacgagtttccctgagccgccgccgcctccgccagtcgccacc
acacccaaggtggagtccggcgccgcacagatggccttcatgggggagatgctgatcccc
gtggcggatgagtacgacccgatgtaccccaacgactacgacaaggtggtgaagcggcag
cgggaggaccgacaacgtcagcgtgagcacgagcggcagaaggagatagacgacagggag
aagaggcggaaggagcgtcacgaggcgagcggcatgtcacggcgacccgagtcggacgac
gaggaggagtacgaggtggagaaacgcaaacgaggcacaatgggagctgccatcgcgcca
ccatcatcgctcatggagagggacaaagacttggctcctgacgatgagatcaaacgcggg
cggatgtcgggtaaagcggccatccctccccccaactacgaggactcgggcgagaggccg
cgctccccacctggtggctccagctccttcatctccaacatgggaggcacggtggcgcac
aagatcatgcagaagtacggcttccgcgaggggcagggcctgggcaagcacgagcagggc
ctgagcacggcgctgtccgtcgagaagacgagcaagcgcggcggcaagatcgtcatcgga
gacaacgtgcccaaggaggccgaagctgcgacggtggtggctgctgcggcggcagcggcg
gcatcggcgtcgccatcgccagcatcggccaaaaaacaggagccaaaccccctgacggag
attctgaagaacccgaccaaagtggtgctgctgcggaacatggttggccccggcgaggtt
gacgaggacctagagagcgagaccaaggaggagtgcgagaagtacggcaaggtgatcaag
tgtgtcatcttcgagatgccgggcgcccccgaggatgatgcggtgcggattttcctcgag
tttgagcggatggagtcggcgatcaaagctgtcgttgacctgaacggacgctactttggc
ggtcgcatcgttaaagccggcttctacaacctcgacaagttccgccgtcttgacctggcc
acctcagtgtga

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