Petromyzon marinus (sea lamprey): 116952306
Help
Entry
116952306 CDS
T09614
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04510
Focal adhesion
pmrn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116952306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
116952306
NCBI-ProteinID:
XP_032827419
UniProt:
A0AAJ7XAP6
LinkDB
All DBs
Position
46:complement(6973785..7030881)
Genome browser
AA seq
1816 aa
AA seq
DB search
MGVSAAILAASALLALLGPVSGEPEMPHGCAQGSCYPATGDLLVGRSDRLGASSTCGLAQ
PQPYCIVSHLQDEKKCFTCDSREEVGGGGNGALSHRVHNVITAFALDRKKAWWQSENGVE
NVTLRLDLEAEFHFTHLIMTFKTFRPASLLIERSADFGRTWQIYRYFAYDCSAAFPGVAM
GPLRRVDDVICESRYSDIEPSTEGEVIFRVLDPAIKITDPYSPAIQSLLKITNLRINFTR
LHTLGDNLLDSRVEIKEKYYYALYELVVRGNCFCYGHASECAPIDGVRGDVDGMVHGRCV
CKHNTEGLNCERCEDFYNDMPWRPAEGRNTNACKRCNCNNHAVRCHFDGAVFAATGNASG
GVCEDCQHNTAGRSCELCKPFFYQDPLRDIRDAAVCVPCDCDPDGSLNGGMCDGHTDPSA
GLESGQCRCKAHVEGPRCDQCRAGFYGLDAEQPDGCQPCHCNPLGTVGGAAACDAITGDC
YCKRLVTGRSCDQCLAEHWGLSHDGSGCRPCECDVGGAVDNRCSVESGQCRCRGHMGGRP
CSRPDSGFFCMALDHYTHEAETALPVDSNGTPGGLAESLLTPSLCEERERVKQGLPTGRG
LALVPRAPTPGRAPTWTGPGFVRVPEGGRLEFRVSDVPHSMDYELLIRYEPQLPEEWEVV
LVTVLRPSEIPTHSPCGNTIPADDHLAVSLPPGSRYVVLPQAVCLEKGVSYVIRADFTRY
TTHEHAESAHVLIDSLVLLPLYTSLEMFSGDDRESTRRRENFDRYLCQESGKAVMKQPVT
EVCAGLICSLSALLHDGALPCQCDPQGSLSSECDPNGGQCHCRPNVVGRRCDACAPGTYG
FGPSGCLSCECSDEGSHHAFCDARTGQCRCRHGAYGRRCDHCQPGYWGFPACRPCRCNGH
AEECHPVTGTCHTCREHTAGESCERCADGYYGNPVLGSGEQCRPCPCPGGPGSGRHFASS
CHEDPHSQRVVCSCRPGYTGSSCEECAPGHHGNPHEAGGSCRPCRCHGNIDPTDPGSCDR
RSGVCLRCLHHSHGPDCGACLPGFYGNATQQSCQRCACSPYGVDPRRCPPGAVCECDAAS
GQCPCRQHALGRACEHCAPGHWGLAEGEGCRACACDRTKALGDACNEFTGQCECQPGFGG
RSCTECMENFWGNPSVECIACQCDARGISTAQCERATGHCVCRAGVAGVRCDACARGFSG
SFPHCEPCHQCFGDWDRIVQSLAERSRGLAERAARLAESGAVGAFGEQFGALEEKLAEAR
RIVDGRVATALSVTALIGSMEDIRKMIDELTNRLTPLEIDLTESQDRNANATGRIAELER
DVRRLNRTAGGLEHQLDLIKNSNYRGAYDSVRQLHADSLAAESRANASVTGSGSPLGRSA
DARSRARALLDASRDEFRRKSAAGRDALETLADDVRSLSLRTVSEKVCGSPGDEPCSDSP
CGGPGCRDEDGSPRCGGLGCNGAATAAAEALERARNADLEIQQAAAQVEELNKQVQDARA
RSHQARGQAEAALDRANGTRERAQRANAQLRALIQQIKDFLQQDSASPDDIELVSNRVLE
LSVPASAEQTHELAAEIKRRVADLANVDAILEQTSGDIADANRLLQEARDAKTRADDVLA
TAEGVKGALEDAEMAQKAAQEAINQAKGDIQGAQNTLASIASETDSAEQRLREAAERAAR
IDDAVAALKIKSSQAAMASTRADKAAGNAKLRADEAKQILGGELREKFGLLETQARSKAD
GATTARQRAEALRDQARKLLTGAQDKLQRLMDLEEQYERNEQALEEKARSLDGLEEKMQA
ILHAINRQITVYNTCQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgggggtctctgccgccatcctggcggcgtccgcgctcctggccctgctgggccccgtc
tccggcgagccggagatgccccacggctgcgcgcagggcagctgctacccggccacgggc
gacctgttggtggggcgcagcgaccgcctcggggcctcctccacgtgcggcctcgcgcag
ccgcagccgtactgcatcgtgagccacctgcaggatgagaagaagtgcttcacgtgcgac
tcgcgcgaggaggtgggcggcggcggcaacggcgccctgagccaccgcgtccacaacgtc
atcaccgccttcgccctcgaccgcaagaaggcctggtggcagagcgagaacggcgtggag
aacgtgaccctgcgtctcgacctggaggctgagttccacttcacccacctcatcatgacc
tttaagacgttccgcccggcgtcgctgctcatcgagcgctccgccgactttggccgcacg
tggcagatctaccgctacttcgcctacgactgctccgccgccttccccggcgtggccatg
gggccgctgcgccgcgtggacgacgtcatctgcgagtcgcgatactcggacatcgagccg
tctaccgagggggaggtcatcttccgagtgctggacccggccatcaagatcaccgacccc
tacagcccggccatccagagcctgctgaagatcacgaacctgcgcatcaacttcacgcgg
ctgcacacgctgggggacaacctgctggactcgcgcgtcgagatcaaggagaagtactac
tacgcgctgtacgagctcgtcgtgcgcggcaactgcttctgctacggccacgcgagcgag
tgcgcgcccatcgacggcgtgcgtggggacgtcgacggcatggtgcacgggcgctgcgtg
tgcaagcacaacaccgaggggctcaactgcgagcgctgcgaggatttctacaacgacatg
ccgtggcgcccggccgaggggcgcaacaccaacgcctgcaagcgctgcaactgcaacaac
cacgcggtgcggtgccactttgatggcgcggtgtttgccgcgacggggaacgccagcggc
ggcgtgtgcgaggactgccagcacaacacggccgggcgcagctgcgagctctgcaaaccc
ttcttctaccaggacccgctgcgcgacatccgcgacgccgctgtctgcgttccgtgcgac
tgcgaccccgacggctcgctgaacggggggatgtgtgacggacacaccgacccgtcggcg
gggctcgagtccgggcagtgccgctgcaaggcgcacgtggagggaccccggtgcgaccag
tgccgggcgggattctatggactcgacgccgagcagcccgacggatgccagccctgccac
tgtaacccgctgggcacggtgggtggcgccgcggcatgcgacgccatcacgggcgactgc
tactgcaagcgtctcgtcacggggcgcagctgcgaccagtgcctggcggagcactgggga
ctgagccacgacgggagcgggtgccgcccgtgcgagtgcgacgtgggaggcgccgtcgac
aaccggtgctccgtggagtcggggcagtgccgctgccgcggccacatgggcgggcggccg
tgctcgcggccggactcgggcttcttctgcatggcgctcgaccactacacgcacgaggcc
gagaccgcgctgcccgtcgactccaacggcacccccggggggctggcggagtccctgctg
accccctcgttgtgtgaggagcgagagcgcgtcaagcaaggcctcccgacaggccgggga
ctggcgctggtgccgcgggcccccacgcccgggcgcgcgcccacgtggacggggccgggc
ttcgtgcgggtgcccgagggcggccgcctcgagttccgcgtctccgacgtgccccactcc
atggactacgagctgctcatccgctacgagccgcagctgccggaggagtgggaggtggtg
ctggtgacggtgcttcgccccagcgaaatccccacgcactcaccgtgcgggaacaccatc
ccggccgacgaccacctcgccgtgtcgctgccgcccgggtcacgctacgtggtgctgccc
caggccgtgtgcctggagaagggagtgagctacgtgatccgcgcggacttcacgcgctac
acgacgcacgagcacgcggagagcgcccacgtgctcatcgactcgctggtgctgctgccg
ctctacacgtcgctggagatgttctccggggacgatcgcgagtcgactcggcggcgcgag
aactttgatcgctacctctgccaggagagcggcaaggccgtgatgaagcagccggtgacg
gaggtgtgcgccggcctcatctgcagcctgtcggcgctgctgcacgacggcgccctgccg
tgccagtgcgacccgcagggttcgctgagctcggagtgcgaccctaacgggggtcagtgt
cattgccgccccaacgtggtggggcggcgctgtgacgcgtgcgcgcctgggacctacggc
ttcgggcccagcggctgcctctcgtgcgagtgcagcgacgagggctcccaccacgcgttc
tgcgacgcgcgcaccgggcagtgccgctgccggcacggcgcgtacggccggcgctgcgac
cactgccagccgggctactggggcttcccggcgtgccggccgtgccggtgcaacggccac
gccgaggagtgccacccggtcaccgggacgtgccacacgtgccgcgagcacaccgccggg
gagagctgcgagcgctgtgcggatggttactatggaaacccagtgctgggctcgggcgag
cagtgccggccttgcccgtgtcctggcggccccggatccgggcgtcacttcgccagctcg
tgccacgaggacccgcactcgcagcgcgtcgtctgcagctgccgtccaggatacaccggc
tcgagctgcgaggagtgcgcccccggtcaccacggcaacccgcacgaggcgggcggctcg
tgccggccctgccgctgccacggcaacatcgacccgaccgacccggggtcttgcgaccgg
cgctcgggcgtctgcctccgctgcctgcaccactcgcacgggcccgactgcggcgcctgc
ctgcccggtttctacggcaacgccacgcagcagagctgccaacgctgcgcctgcagccca
tacggcgtggacccgcgccgctgcccgccgggcgccgtgtgcgagtgcgacgcggcgtcg
gggcagtgcccgtgtcggcagcacgcgctgggacgcgcgtgcgagcactgcgcgcccggc
cactggggcctggccgagggcgaggggtgccgtgcgtgcgcctgcgaccgcaccaaggcg
ctcggcgacgcctgcaacgagttcacagggcagtgcgagtgtcagccgggcttcgggggc
cgctcctgcaccgaatgcatggagaacttctggggcaatcccagcgtcgagtgcatcgcg
tgccagtgcgacgcgcgcgggatctccacggcgcagtgcgagcgggcgacggggcactgc
gtgtgccgcgccggcgtggcgggggtgcgctgcgacgcgtgcgcgcgcggcttctccggg
agcttcccgcactgcgagccctgccaccagtgcttcggggactgggaccgcatcgtgcag
tcgctggcggagcggtcgcgcggcctggcggagcgcgccgctcgcctcgccgagtcggga
gctgtcggcgccttcggggagcagtttggcgccctggaggagaagctggcggaggcgcgg
aggatcgtggatgggcgcgtcgccacggccctctccgtcaccgccctcatcggctccatg
gaggacatccggaaaatgatcgatgagctgacgaaccggctgacgccgctggagatcgac
ctcacggaaagccaggaccggaacgccaacgccacggggcggatcgcggagctggagcgg
gacgtgcggcgcctcaaccgcaccgccggcggcctggagcaccaactggatctcatcaag
aactccaactaccgcggcgcgtacgacagcgtgcgccagctgcacgccgactcgctggcg
gcggagtcgcgagccaacgcctccgtgacgggctccgggagcccgctgggccgctcggcc
gacgcccgctcgcgagcccgggcgctgctcgacgcctcgcgcgacgagttccgccgcaag
agcgcggccgggcgcgacgcgctggagacgctcgccgacgacgtgcgttcgctcagcctg
cgcaccgtcagcgagaaggtgtgcggctccccaggtgacgagccgtgctcggactccccg
tgcggggggcccgggtgccgggacgaggacggctccccgcgctgcgggggcctggggtgc
aacggcgccgccacggccgccgcggaggcgctggagcgagcgcgcaacgccgacctggag
atccagcaggccgcggcgcaggtggaggagctcaacaagcaggtccaagatgcgcgtgcg
aggtcgcaccaggcccgggggcaggcggaggcggcgctggacagagccaacgggacgcgg
gagcgcgcacagcgcgccaacgcccagctccgcgccctcatccagcagatcaaggacttc
ctgcagcaggacagcgccagccccgacgacatcgagctggtgtcgaaccgcgtgctggag
ctgagcgtgccggcgtcggccgagcagacgcacgagctggcggccgagatcaagcggcgc
gtcgccgacctcgccaacgtcgacgccatcctggagcagacaagcggcgacatcgccgac
gccaacaggctcctgcaggaggcgcgcgatgccaagacgcgtgccgatgacgtgctggcg
acggcggagggagtgaagggggcactggaggacgcggagatggcgcagaaagcggcgcaa
gaggcgatcaatcaggcgaagggagacatccaaggggcgcagaacacactcgcatcgatc
gcgtcggagacggactccgcagagcagcgtctgcgcgaggcggcggagcgagcggcgcgg
atcgacgacgccgtcgcggcgctcaagatcaagagcagccaggccgccatggccagcacg
cgcgccgacaaggccgcggggaacgccaagctccgcgccgacgaagccaagcagatcctg
ggcggggagctgagggagaagttcggcttgctggagacgcaggctcgcagcaaggctgac
ggcgccaccacggcgcgccaacgagccgaggccctgcgcgatcaggcccgcaaactcctc
accggtgcacaggacaagctgcagaggctcatggacctggaagagcagtacgagaggaac
gagcaggcgctggaggagaaggctcgctcgctggacggactcgaggagaagatgcaagcc
atcctgcacgccatcaaccgccagatcaccgtctacaacacgtgccagtga
DBGET
integrated database retrieval system
