Petromyzon marinus (sea lamprey): 116952535
Help
Entry
116952535 CDS
T09614
Name
(RefSeq) transcription factor Sox-1-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116952535
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116952535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Zip
SOXp
Motif
Other DBs
NCBI-GeneID:
116952535
NCBI-ProteinID:
XP_032827849
UniProt:
A0AAJ7U275
LinkDB
All DBs
Position
47:2694942..2737742
Genome browser
AA seq
347 aa
AA seq
DB search
MTTKPGGATAVLGDAHVKRPMNAFMVWSKGERRKLAQDNPKMHNSEISKRLGAEWKLLSE
AEKRPFIDEAKRLRAQHMKEHPDYKYRPRRKPKSMLALKKDRFAFPFPYFAADADHVAKL
HHQQHHHHHHQQHQQHQQHHQHHQQQQAAAAILCPRSPSGVDHPLQQCLQGVDDHHKIRA
LLPHYSLLPRGVADLSPAAPGSGAAGGAAAAGGGGGGGGGGGGGGAATATAAAAAAAAAA
AFAYQHHFGHHHHQQQQQEQQQQQHHVLAGHAHSPHHHPHHPHHPHHHVPAPPGYLVPYS
WAAAAAMAGGAAMQNSPHLAYLLFPPAPPASLAKPTAIEPLRASPYP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaaccaggcggggccacggcggtcctgggcgacgctcacgtgaagcgcccc
atgaacgcgttcatggtctggtcgaagggcgaacgccgcaagttggcgcaggacaacccc
aagatgcacaactcggagatctccaagcggctcggcgccgagtggaagctcctgagcgag
gccgagaagaggcccttcatcgacgaggccaagcggctgcgcgcgcagcacatgaaggag
cacccggactataaataccgaccacgccgcaaacccaagtccatgctggcgctcaaaaag
gaccgcttcgctttcccgttcccttacttcgcggccgacgctgaccacgtggcgaagttg
catcaccagcagcaccaccaccaccaccaccagcagcaccagcagcatcagcagcaccat
cagcaccatcagcagcagcaggcggcagcggcgatcctttgtccgaggtcgccctccgga
gtggaccatcctctgcagcagtgtctgcagggcgtggatgatcaccacaagatccgcgcc
ctgctgccccactactcgctgctgccccgcggcgtcgcggacctctcccctgcggcgcct
ggatccggggcagcgggaggagcagcagcagcaggaggtggtggtggtggtggtggtggc
ggtggtggtggtggagctgccactgcaactgccgcggctgccgccgcagcagcagcagca
gcgttcgcctaccagcatcacttcggacatcaccatcatcagcagcaacagcaagagcag
cagcagcagcagcaccacgtgctggcgggacatgcccactcgcctcaccaccaccctcac
caccctcaccaccctcaccaccacgtccccgctccccccgggtatctcgtgccttacagt
tgggcagcagcagcagcgatggccgggggagcggcgatgcaaaacagcccccacctcgcc
tatcttctcttccctccggcgccgccggcgagcctggctaagcccaccgccatcgagccg
ctccgggcctccccctacccgtga
DBGET
integrated database retrieval system
