Petromyzon marinus (sea lamprey): 116952561
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Entry
116952561 CDS
T09614
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25837
SLIT and NTRK-like protein 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04514
Cell adhesion molecules
pmrn04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116952561
04517 IgSF CAM signaling
116952561
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_5
LRRNT
LRR_14
LRRCT
Motif
Other DBs
NCBI-GeneID:
116952561
NCBI-ProteinID:
XP_032827908
UniProt:
A0AAJ7U147
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Position
47:complement(9782025..9794776)
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AA seq
816 aa
AA seq
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MARRVLHVARLLATAFTIALFILTTTSTTSAARARPRAPKPPVPLMCAGPTCSCHDLDVK
CEGQGLDDLSRLGAPPEGPFRLFLQRNAVRRLPALAFARLPGLSLLNLASNGLAHIAEGA
FSGLAELRRLHVNRNALEELRNDTLLGLSSLEYLQADHNLLRRIESGAFARAPKLSVLLL
NDNQLESLPAGLLQSSAALTALDLRGNRLKALPLSGILDCLGHLAQVQLSDNPWDCSACS
HDSPHISSSSSSSSSSSPVLPLWDWLQQRPETAQMAAGSFDFPRCWWPPSLRNASLRDVP
RSHLACPVGLQAPQGKSSPAEGDADGQQQRPQRPQRPDACPAACHCSPLTEEDSGVAVFC
RERGLAAVPRFWPTQAPDARRLDLSWNLIEEALPDDFEGLGSLLELDLSHNRVASLRPGT
FSRLRSLRRLQLSGNALTRLGPGVFAGLASLAFLDIERNAIREVGAGALAELPALRQLKL
ARNLLHELPLAVLRGPVELARLDVRGNRLSVPPVRGLGAAVQLELRDNPWHCDCIVRHDV
TRWVTAWRQAAPQGALSTMPPGVSGALCEGPAAMAGRSLASLRSDEPCVEAPTSTTPAPA
GPHVGTPRAPETSSSSSSSPPPAAGPEASLPLHVFVAGVVAVFIVTAVGTAGIFVLAMRR
KQQKQQRSGGKHRESMVGGGCSGGNNGNKGSGDANNRGPGGARGTPTTPTGRRGAGIEEA
APFQGRVVHNPIYKPLLVKGYGDGTADGLYPGLLLKHHELHGAARALCPTPPTPWAWAGS
AVAVDGGPGAPGVVPGYGGGPCSGPGSVPAITWQKL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtgtcctgcacgtcgcgcgtctcctcgccaccgccttcaccatcgccctt
ttcatcctcaccaccacctccaccacctccgccgcacgcgcgcgcccgagagccccgaag
ccgccggtgccactgatgtgcgccgggccgacgtgcagctgccacgacctggacgtgaag
tgcgagggccagggcctcgacgacctctcccggctcggcgcacccccggaggggcccttc
cgcctcttcctgcagcgcaacgcggtgcggcggctgcccgcgctggcgttcgcccgcctg
cctgggctcagcctcctcaacctcgcctccaacggcctcgcgcacatcgccgagggcgcc
ttcagcggcctcgccgagctgcggcgcctccacgtgaaccgcaacgctctcgaggagctg
cgcaacgacaccctgctgggcctcagctccctcgagtacctgcaggcggaccacaacctc
ctgcgcaggatcgagagcggcgcgttcgcgcgcgcgccgaagctcagcgtgctgctgctc
aacgacaaccagctggagagtctccccgcgggactcctgcagagctccgcggctctcacg
gccctggacctcaggggaaaccgccttaaggctttaccgttgagcggaatcctcgattgc
ctgggtcacctggctcaagtgcagctctccgacaacccatgggactgctctgcttgcagc
cacgactcccctcatatatcctcctcatcctcctcgtcatcatcgtcatctccggtgctc
cccctgtgggactggctgcagcagaggcctgaaacagcacagatggcggcgggctctttc
gacttcccacggtgctggtggcctccgtcgctccgcaacgcgagcctgcgcgacgttccc
aggtcccacctggcttgccctgtgggcctccaagcaccacagggcaaatcctctcccgcc
gagggggacgccgacgggcagcagcagcggccccagcggccccagcggcccgacgcctgc
ccggccgcatgccactgcagccccttgaccgaggaggattccggcgtcgccgtcttctgc
cgggagcgcggcctggccgctgtgccgcggttctggccgacgcaggcgcccgatgccagg
aggctcgacctgagctggaacctcatcgaggaggcgttgcccgacgacttcgagggcctc
ggcagcctcctggagctcgacctgtcccacaaccgcgtggcgagcctgcgccccggcacc
ttctcgcggctgcgctccctccggcgcctacagctgagtggcaacgcactcaccaggctt
gggcctggagtcttcgcgggcctcgcctcactcgcgttcctcgacatcgagcgcaacgcc
atccgggaggtgggcgccggggcgcttgctgagctgcccgctctgcggcagctgaagctc
gcgcgcaacctcctgcacgagctgccgctggcggtgctgcggggcccggtggagctggcg
cgcctggacgtgcgcgggaaccggctgagcgtgccgcccgtgcggggcctgggcgccgcg
gtgcagctggagctgcgcgacaacccctggcactgtgactgcattgtgcgccacgacgtc
acccgatgggtgacggcgtggaggcaagcggcgccgcagggagctctctccacgatgcct
cccggcgtgagcggcgctctctgcgagggccccgccgccatggctggccggtccctggcg
tccctgcggtccgacgagccgtgcgtggaggcccccacctccacgacccctgctcccgcc
ggaccccacgtggggaccccccgagcgcccgagacctcctcctcctcgtcgtcgtcacct
cctccggcggccgggcccgaggcctcgctgccgctgcacgtgttcgtggcgggcgtggtg
gccgtgttcatcgtgacggccgtgggcaccgccgggatctttgtgctcgcaatgcgcagg
aagcagcagaagcagcaacggagtggggggaagcaccgagagtccatggtggggggcggc
tgcagcggcggcaacaacggcaacaagggctcgggagacgccaacaaccgtgggccaggg
ggggccaggggcacgccgacgacgccgacgggccggcgcggggcaggaattgaggaggcg
gcccccttccagggccgtgtggtgcacaaccccatctacaagccgctcctcgtcaagggc
tacggcgacggaaccgccgatggcctctacccgggcctgctgctcaagcaccacgagctg
cacggcgccgcccgcgccctctgccccacgcccccaacgccgtgggcctgggccgggtcc
gctgtggcggtggacgggggcccgggggcaccgggggtcgtcccggggtacggcggcggg
ccctgctctgggcctgggtcggtcccagcgatcacttggcagaagctgtag
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